Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCL21O00585 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
CCL21O00585 MIR3648-2-201ENST00000581792 180 ntBASIC23.96■■□□□ 1.43
CCL21O00585 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CCL21O00585 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.96■■□□□ 1.43
CCL21O00585 MIR3648-1-201ENST00000615959 180 ntBASIC23.96■■□□□ 1.43
CCL21O00585 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.96■■□□□ 1.43
CCL21O00585 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CCL21O00585 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.94■■□□□ 1.42
CCL21O00585 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC23.93■■□□□ 1.42
CCL21O00585 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
CCL21O00585 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.93■■□□□ 1.42
CCL21O00585 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.93■■□□□ 1.42
CCL21O00585 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.93■■□□□ 1.42
CCL21O00585 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCL21O00585 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCL21O00585 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCL21O00585 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCL21O00585 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.91■■□□□ 1.42
CCL21O00585 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCL21O00585 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC23.9■■□□□ 1.42
CCL21O00585 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCL21O00585 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
CCL21O00585 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CCL21O00585 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCL21O00585 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.89■■□□□ 1.41
CCL21O00585 DUX4L11-201ENST00000611504 1267 ntBASIC23.89■■□□□ 1.41
CCL21O00585 DUX4L12-201ENST00000614593 1267 ntBASIC23.89■■□□□ 1.41
CCL21O00585 DUX4L14-201ENST00000621227 1267 ntBASIC23.89■■□□□ 1.41
CCL21O00585 LINC01971-201ENST00000617888 1048 ntBASIC23.88■■□□□ 1.41
CCL21O00585 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCL21O00585 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
CCL21O00585 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC23.87■■□□□ 1.41
CCL21O00585 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CCL21O00585 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CCL21O00585 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC23.85■■□□□ 1.41
CCL21O00585 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCL21O00585 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.84■■□□□ 1.41
CCL21O00585 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.84■■□□□ 1.41
CCL21O00585 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCL21O00585 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CCL21O00585 CR559946.2-201ENST00000623684 991 ntBASIC23.83■■□□□ 1.41
CCL21O00585 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCL21O00585 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.82■■□□□ 1.4
CCL21O00585 HSD17B1P1-201ENST00000590052 955 ntBASIC23.82■■□□□ 1.4
CCL21O00585 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCL21O00585 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCL21O00585 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCL21O00585 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCL21O00585 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC23.79■■□□□ 1.4
CCL21O00585 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCL21O00585 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23.79■■□□□ 1.4
CCL21O00585 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCL21O00585 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCL21O00585 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CCL21O00585 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.76■■□□□ 1.39
CCL21O00585 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCL21O00585 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCL21O00585 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.75■■□□□ 1.39
CCL21O00585 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCL21O00585 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCL21O00585 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCL21O00585 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
CCL21O00585 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.73■■□□□ 1.39
CCL21O00585 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC23.72■■□□□ 1.39
CCL21O00585 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCL21O00585 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.72■■□□□ 1.39
CCL21O00585 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
CCL21O00585 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCL21O00585 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CCL21O00585 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCL21O00585 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCL21O00585 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC23.7■■□□□ 1.38
CCL21O00585 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCL21O00585 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC23.68■■□□□ 1.38
CCL21O00585 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
CCL21O00585 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCL21O00585 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCL21O00585 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CCL21O00585 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CCL21O00585 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.67■■□□□ 1.38
CCL21O00585 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCL21O00585 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCL21O00585 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.65■■□□□ 1.38
CCL21O00585 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.65■■□□□ 1.38
CCL21O00585 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCL21O00585 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC23.65■■□□□ 1.38
CCL21O00585 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
CCL21O00585 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
CCL21O00585 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.63■■□□□ 1.37
CCL21O00585 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.63■■□□□ 1.37
CCL21O00585 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CCL21O00585 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
CCL21O00585 DUX4L13-201ENST00000554103 1267 ntBASIC23.62■■□□□ 1.37
CCL21O00585 DUX4L15-201ENST00000611059 1267 ntBASIC23.62■■□□□ 1.37
CCL21O00585 DUX4L23-201ENST00000615195 1269 ntBASIC23.62■■□□□ 1.37
CCL21O00585 DUX4L24-201ENST00000617576 1269 ntBASIC23.62■■□□□ 1.37
CCL21O00585 DUX4L22-201ENST00000618238 1269 ntBASIC23.62■■□□□ 1.37
CCL21O00585 DUX4L20-201ENST00000619712 1269 ntBASIC23.62■■□□□ 1.37
CCL21O00585 DUX4L21-201ENST00000622058 1269 ntBASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms