Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
DDX39AO00148 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
DDX39AO00148 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.13■■■□□ 2.41
DDX39AO00148 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
DDX39AO00148 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC30.12■■■□□ 2.41
DDX39AO00148 AC044849.2-201ENST00000606596 710 ntBASIC30.12■■■□□ 2.41
DDX39AO00148 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
DDX39AO00148 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
DDX39AO00148 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
DDX39AO00148 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
DDX39AO00148 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
DDX39AO00148 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
DDX39AO00148 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
DDX39AO00148 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.1■■■□□ 2.41
DDX39AO00148 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
DDX39AO00148 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.1■■■□□ 2.41
DDX39AO00148 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.09■■■□□ 2.41
DDX39AO00148 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.41
DDX39AO00148 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
DDX39AO00148 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
DDX39AO00148 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.07■■■□□ 2.4
DDX39AO00148 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
DDX39AO00148 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
DDX39AO00148 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
DDX39AO00148 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.05■■■□□ 2.4
DDX39AO00148 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
DDX39AO00148 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
DDX39AO00148 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
DDX39AO00148 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.04■■■□□ 2.4
DDX39AO00148 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
DDX39AO00148 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
DDX39AO00148 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
DDX39AO00148 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
DDX39AO00148 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
DDX39AO00148 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30■■■□□ 2.39
DDX39AO00148 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
DDX39AO00148 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC29.99■■■□□ 2.39
DDX39AO00148 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
DDX39AO00148 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.99■■■□□ 2.39
DDX39AO00148 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC29.98■■■□□ 2.39
DDX39AO00148 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC29.98■■■□□ 2.39
DDX39AO00148 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
DDX39AO00148 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
DDX39AO00148 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC29.97■■■□□ 2.39
DDX39AO00148 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC29.96■■■□□ 2.39
DDX39AO00148 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
DDX39AO00148 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC29.95■■■□□ 2.39
DDX39AO00148 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
DDX39AO00148 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
DDX39AO00148 BOD1-206ENST00000480951 814 ntTSL 2 BASIC29.95■■■□□ 2.39
DDX39AO00148 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC29.95■■■□□ 2.38
DDX39AO00148 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
DDX39AO00148 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
DDX39AO00148 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
DDX39AO00148 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC29.93■■■□□ 2.38
DDX39AO00148 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC29.93■■■□□ 2.38
DDX39AO00148 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
DDX39AO00148 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
DDX39AO00148 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
DDX39AO00148 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
DDX39AO00148 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
DDX39AO00148 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
DDX39AO00148 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC29.9■■■□□ 2.38
DDX39AO00148 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
DDX39AO00148 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC29.9■■■□□ 2.38
DDX39AO00148 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC29.89■■■□□ 2.38
DDX39AO00148 MIR6090-201ENST00000622481 60 ntBASIC29.89■■■□□ 2.38
DDX39AO00148 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC29.89■■■□□ 2.37
DDX39AO00148 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
DDX39AO00148 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC29.88■■■□□ 2.37
DDX39AO00148 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
DDX39AO00148 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
DDX39AO00148 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
DDX39AO00148 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC29.85■■■□□ 2.37
DDX39AO00148 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
DDX39AO00148 ABHD17AP4-201ENST00000411545 909 ntBASIC29.84■■■□□ 2.37
DDX39AO00148 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
DDX39AO00148 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.83■■■□□ 2.37
DDX39AO00148 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC29.83■■■□□ 2.37
DDX39AO00148 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
DDX39AO00148 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC29.83■■■□□ 2.37
DDX39AO00148 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
DDX39AO00148 AC108673.1-201ENST00000510422 1159 ntBASIC29.83■■■□□ 2.37
DDX39AO00148 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
DDX39AO00148 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.82■■■□□ 2.36
DDX39AO00148 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC29.82■■■□□ 2.36
DDX39AO00148 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC29.81■■■□□ 2.36
DDX39AO00148 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
DDX39AO00148 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
DDX39AO00148 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC29.8■■■□□ 2.36
DDX39AO00148 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC29.8■■■□□ 2.36
DDX39AO00148 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC29.8■■■□□ 2.36
DDX39AO00148 CIB2-204ENST00000557846 934 ntTSL 3 BASIC29.8■■■□□ 2.36
DDX39AO00148 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC29.79■■■□□ 2.36
DDX39AO00148 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
DDX39AO00148 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
DDX39AO00148 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.77■■■□□ 2.36
DDX39AO00148 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
DDX39AO00148 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
DDX39AO00148 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC29.76■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms