Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
IGHV4-28A0A0C4DH34 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IGHV4-28A0A0C4DH34 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.23■□□□□ 0.67
IGHV4-28A0A0C4DH34 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
IGHV4-28A0A0C4DH34 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IGHV4-28A0A0C4DH34 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IGHV4-28A0A0C4DH34 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC19.23■□□□□ 0.67
IGHV4-28A0A0C4DH34 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IGHV4-28A0A0C4DH34 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.22■□□□□ 0.67
IGHV4-28A0A0C4DH34 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IGHV4-28A0A0C4DH34 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.22■□□□□ 0.67
IGHV4-28A0A0C4DH34 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
IGHV4-28A0A0C4DH34 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
IGHV4-28A0A0C4DH34 AL161658.1-201ENST00000623641 1967 ntBASIC19.21■□□□□ 0.67
IGHV4-28A0A0C4DH34 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IGHV4-28A0A0C4DH34 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
IGHV4-28A0A0C4DH34 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
IGHV4-28A0A0C4DH34 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
IGHV4-28A0A0C4DH34 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
IGHV4-28A0A0C4DH34 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
IGHV4-28A0A0C4DH34 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
IGHV4-28A0A0C4DH34 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
IGHV4-28A0A0C4DH34 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
IGHV4-28A0A0C4DH34 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IGHV4-28A0A0C4DH34 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
IGHV4-28A0A0C4DH34 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IGHV4-28A0A0C4DH34 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IGHV4-28A0A0C4DH34 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.18■□□□□ 0.66
IGHV4-28A0A0C4DH34 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.18■□□□□ 0.66
IGHV4-28A0A0C4DH34 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
IGHV4-28A0A0C4DH34 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.17■□□□□ 0.66
IGHV4-28A0A0C4DH34 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.17■□□□□ 0.66
IGHV4-28A0A0C4DH34 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IGHV4-28A0A0C4DH34 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
IGHV4-28A0A0C4DH34 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.16■□□□□ 0.66
IGHV4-28A0A0C4DH34 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IGHV4-28A0A0C4DH34 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
IGHV4-28A0A0C4DH34 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
IGHV4-28A0A0C4DH34 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
IGHV4-28A0A0C4DH34 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
IGHV4-28A0A0C4DH34 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
IGHV4-28A0A0C4DH34 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.14■□□□□ 0.65
IGHV4-28A0A0C4DH34 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IGHV4-28A0A0C4DH34 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
IGHV4-28A0A0C4DH34 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.14■□□□□ 0.65
IGHV4-28A0A0C4DH34 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.13■□□□□ 0.65
IGHV4-28A0A0C4DH34 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
IGHV4-28A0A0C4DH34 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
IGHV4-28A0A0C4DH34 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
IGHV4-28A0A0C4DH34 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
IGHV4-28A0A0C4DH34 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.12■□□□□ 0.65
IGHV4-28A0A0C4DH34 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IGHV4-28A0A0C4DH34 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IGHV4-28A0A0C4DH34 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
IGHV4-28A0A0C4DH34 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
IGHV4-28A0A0C4DH34 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IGHV4-28A0A0C4DH34 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
IGHV4-28A0A0C4DH34 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC19.1■□□□□ 0.65
IGHV4-28A0A0C4DH34 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
IGHV4-28A0A0C4DH34 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
IGHV4-28A0A0C4DH34 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
IGHV4-28A0A0C4DH34 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
IGHV4-28A0A0C4DH34 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
IGHV4-28A0A0C4DH34 AC108673.1-201ENST00000510422 1159 ntBASIC19.08■□□□□ 0.64
IGHV4-28A0A0C4DH34 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
IGHV4-28A0A0C4DH34 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
IGHV4-28A0A0C4DH34 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
IGHV4-28A0A0C4DH34 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.07■□□□□ 0.64
IGHV4-28A0A0C4DH34 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.07■□□□□ 0.64
IGHV4-28A0A0C4DH34 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
IGHV4-28A0A0C4DH34 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
IGHV4-28A0A0C4DH34 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
IGHV4-28A0A0C4DH34 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
IGHV4-28A0A0C4DH34 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC19.06■□□□□ 0.64
IGHV4-28A0A0C4DH34 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
IGHV4-28A0A0C4DH34 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.05■□□□□ 0.64
IGHV4-28A0A0C4DH34 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
IGHV4-28A0A0C4DH34 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.04■□□□□ 0.64
IGHV4-28A0A0C4DH34 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.04■□□□□ 0.64
IGHV4-28A0A0C4DH34 MIR6090-201ENST00000622481 60 ntBASIC19.04■□□□□ 0.64
IGHV4-28A0A0C4DH34 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
IGHV4-28A0A0C4DH34 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
IGHV4-28A0A0C4DH34 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
IGHV4-28A0A0C4DH34 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.03■□□□□ 0.64
IGHV4-28A0A0C4DH34 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.03■□□□□ 0.64
IGHV4-28A0A0C4DH34 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.03■□□□□ 0.64
IGHV4-28A0A0C4DH34 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IGHV4-28A0A0C4DH34 ABHD17AP4-201ENST00000411545 909 ntBASIC19.02■□□□□ 0.64
IGHV4-28A0A0C4DH34 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
IGHV4-28A0A0C4DH34 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
IGHV4-28A0A0C4DH34 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
IGHV4-28A0A0C4DH34 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
IGHV4-28A0A0C4DH34 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
IGHV4-28A0A0C4DH34 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IGHV4-28A0A0C4DH34 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
IGHV4-28A0A0C4DH34 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.01■□□□□ 0.63
IGHV4-28A0A0C4DH34 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
IGHV4-28A0A0C4DH34 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.01■□□□□ 0.63
IGHV4-28A0A0C4DH34 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IGHV4-28A0A0C4DH34 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms