Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC00474Q9P2X8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC13.63□□□□□ -0.23
LINC00474Q9P2X8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00474Q9P2X8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00474Q9P2X8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00474Q9P2X8 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00474Q9P2X8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00474Q9P2X8 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
LINC00474Q9P2X8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00474Q9P2X8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00474Q9P2X8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00474Q9P2X8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00474Q9P2X8 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00474Q9P2X8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC00474Q9P2X8 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00474Q9P2X8 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00474Q9P2X8 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00474Q9P2X8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00474Q9P2X8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00474Q9P2X8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00474Q9P2X8 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00474Q9P2X8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00474Q9P2X8 JTB-203ENST00000368589 1216 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00474Q9P2X8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
LINC00474Q9P2X8 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC13.62□□□□□ -0.23
LINC00474Q9P2X8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00474Q9P2X8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00474Q9P2X8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC13.62□□□□□ -0.23
LINC00474Q9P2X8 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00474Q9P2X8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00474Q9P2X8 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC00474Q9P2X8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC00474Q9P2X8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LINC00474Q9P2X8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00474Q9P2X8 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00474Q9P2X8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00474Q9P2X8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC00474Q9P2X8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC00474Q9P2X8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00474Q9P2X8 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00474Q9P2X8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC00474Q9P2X8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
LINC00474Q9P2X8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
LINC00474Q9P2X8 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00474Q9P2X8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00474Q9P2X8 GOLGA2P6-201ENST00000340929 2049 ntBASIC13.61□□□□□ -0.23
LINC00474Q9P2X8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
LINC00474Q9P2X8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC00474Q9P2X8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00474Q9P2X8 ZNRF2P3-201ENST00000424200 374 ntBASIC13.61□□□□□ -0.23
LINC00474Q9P2X8 AC079140.4-201ENST00000507448 529 ntBASIC13.61□□□□□ -0.23
LINC00474Q9P2X8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00474Q9P2X8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC00474Q9P2X8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC13.61□□□□□ -0.23
LINC00474Q9P2X8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00474Q9P2X8 TPRG1LP1-201ENST00000598702 760 ntBASIC13.61□□□□□ -0.23
LINC00474Q9P2X8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC00474Q9P2X8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00474Q9P2X8 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00474Q9P2X8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00474Q9P2X8 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00474Q9P2X8 FAM99A-202ENST00000538190 1989 ntBASIC13.61□□□□□ -0.23
LINC00474Q9P2X8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00474Q9P2X8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00474Q9P2X8 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LINC00474Q9P2X8 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00474Q9P2X8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC00474Q9P2X8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00474Q9P2X8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
LINC00474Q9P2X8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
LINC00474Q9P2X8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC13.6□□□□□ -0.23
LINC00474Q9P2X8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00474Q9P2X8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
LINC00474Q9P2X8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00474Q9P2X8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC00474Q9P2X8 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC00474Q9P2X8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00474Q9P2X8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00474Q9P2X8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00474Q9P2X8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00474Q9P2X8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LINC00474Q9P2X8 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
LINC00474Q9P2X8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
LINC00474Q9P2X8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00474Q9P2X8 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC13.6□□□□□ -0.23
LINC00474Q9P2X8 SP2-202ENST00000613139 908 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC00474Q9P2X8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC00474Q9P2X8 MIR6084-201ENST00000622012 110 ntBASIC13.6□□□□□ -0.23
LINC00474Q9P2X8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC00474Q9P2X8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
LINC00474Q9P2X8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00474Q9P2X8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00474Q9P2X8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00474Q9P2X8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00474Q9P2X8 LSR-203ENST00000360798 1963 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00474Q9P2X8 BID-212ENST00000614949 1988 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC00474Q9P2X8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00474Q9P2X8 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC00474Q9P2X8 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00474Q9P2X8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms