Protein–RNA interactions for Protein: Q6Q5H1

TY1A-PR3, Transposon Ty1-PR3 Gag polyprotein, yeastyeast

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR3Q6Q5H1 YHI9YHR029C 885 nt4.48□□□□□ -1.69
TY1A-PR3Q6Q5H1 SAE3YHR079C-A 276 nt4.48□□□□□ -1.69
TY1A-PR3Q6Q5H1 RFU1YLR073C 603 nt4.48□□□□□ -1.69
TY1A-PR3Q6Q5H1 LDB7YBL006C 543 nt4.48□□□□□ -1.69
TY1A-PR3Q6Q5H1 YDL199CYDL199C 2064 nt4.48□□□□□ -1.69
TY1A-PR3Q6Q5H1 PGM2YMR105C 1710 nt4.48□□□□□ -1.69
TY1A-PR3Q6Q5H1 SSF1YHR066W 1362 nt4.48□□□□□ -1.69
TY1A-PR3Q6Q5H1 RNA14YMR061W 2034 nt4.47□□□□□ -1.69
TY1A-PR3Q6Q5H1 OTU1YFL044C 906 nt4.47□□□□□ -1.69
TY1A-PR3Q6Q5H1 CUP2YGL166W 678 nt4.47□□□□□ -1.69
TY1A-PR3Q6Q5H1 YBR032WYBR032W 303 nt4.47□□□□□ -1.69
TY1A-PR3Q6Q5H1 YBR012W-AYBR012W-A 1323 nt4.46□□□□□ -1.69
TY1A-PR3Q6Q5H1 YOR142W-AYOR142W-A 1323 nt4.46□□□□□ -1.69
TY1A-PR3Q6Q5H1 YPR158W-AYPR158W-A 1323 nt4.46□□□□□ -1.69
TY1A-PR3Q6Q5H1 RRP9YPR137W 1722 nt4.46□□□□□ -1.69
TY1A-PR3Q6Q5H1 TPA1YER049W 1935 nt4.46□□□□□ -1.69
TY1A-PR3Q6Q5H1 KAR9YPL269W 1935 nt4.46□□□□□ -1.69
TY1A-PR3Q6Q5H1 VID22YLR373C 2706 nt4.46□□□□□ -1.69
TY1A-PR3Q6Q5H1 NNK1YKL171W 2787 nt4.46□□□□□ -1.7
TY1A-PR3Q6Q5H1 YJL086CYJL086C 369 nt4.46□□□□□ -1.7
TY1A-PR3Q6Q5H1 YJR079WYJR079W 330 nt4.46□□□□□ -1.7
TY1A-PR3Q6Q5H1 SCS22YBL091C-A 528 nt4.46□□□□□ -1.7
TY1A-PR3Q6Q5H1 RPS9AYPL081W 594 nt4.46□□□□□ -1.7
TY1A-PR3Q6Q5H1 SPE3YPR069C 882 nt4.46□□□□□ -1.7
TY1A-PR3Q6Q5H1 YEH2YLR020C 1617 nt4.46□□□□□ -1.7
TY1A-PR3Q6Q5H1 MSC2YDR205W 2175 nt4.46□□□□□ -1.7
TY1A-PR3Q6Q5H1 SHS1YDL225W 1656 nt4.45□□□□□ -1.7
TY1A-PR3Q6Q5H1 HRD1YOL013C 1656 nt4.45□□□□□ -1.7
TY1A-PR3Q6Q5H1 PGS1YCL004W 1566 nt4.45□□□□□ -1.7
TY1A-PR3Q6Q5H1 BI4Q0120 1917 nt4.45□□□□□ -1.7
TY1A-PR3Q6Q5H1 Q0032Q0032 291 nt4.45□□□□□ -1.7
TY1A-PR3Q6Q5H1 YDR187CYDR187C 519 nt4.45□□□□□ -1.7
TY1A-PR3Q6Q5H1 CAX4YGR036C 720 nt4.45□□□□□ -1.7
TY1A-PR3Q6Q5H1 PCL5YHR071W 690 nt4.45□□□□□ -1.7
TY1A-PR3Q6Q5H1 YJL169WYJL169W 369 nt4.45□□□□□ -1.7
TY1A-PR3Q6Q5H1 YKL068W-AYKL068W-A 237 nt4.45□□□□□ -1.7
TY1A-PR3Q6Q5H1 MRPL38YKL170W 417 nt4.45□□□□□ -1.7
TY1A-PR3Q6Q5H1 MCP1YOR228C 909 nt4.45□□□□□ -1.7
TY1A-PR3Q6Q5H1 YOL153CYOL153C 1746 nt4.45□□□□□ -1.7
TY1A-PR3Q6Q5H1 MDM36YPR083W 1740 nt4.45□□□□□ -1.7
TY1A-PR3Q6Q5H1 HIR2YOR038C 2628 nt4.45□□□□□ -1.7
TY1A-PR3Q6Q5H1 SWP82YFL049W 1872 nt4.45□□□□□ -1.7
TY1A-PR3Q6Q5H1 PPQ1YPL179W 1650 nt4.45□□□□□ -1.7
TY1A-PR3Q6Q5H1 BBC1YJL020C 3474 nt4.44□□□□□ -1.7
TY1A-PR3Q6Q5H1 ALR2YFL050C 2577 nt4.44□□□□□ -1.7
TY1A-PR3Q6Q5H1 YDL152WYDL152W 366 nt4.44□□□□□ -1.7
TY1A-PR3Q6Q5H1 snR8snR8 190 nt4.44□□□□□ -1.7
TY1A-PR3Q6Q5H1 SMB1YER029C 591 nt4.44□□□□□ -1.7
TY1A-PR3Q6Q5H1 YGR035CYGR035C 351 nt4.44□□□□□ -1.7
TY1A-PR3Q6Q5H1 CRG1YHR209W 876 nt4.44□□□□□ -1.7
TY1A-PR3Q6Q5H1 MRP17YKL003C 396 nt4.44□□□□□ -1.7
TY1A-PR3Q6Q5H1 YMR013C-AYMR013C-A 150 nt4.44□□□□□ -1.7
TY1A-PR3Q6Q5H1 YNL184CYNL184C 327 nt4.44□□□□□ -1.7
TY1A-PR3Q6Q5H1 YBR201C-AYBR201C-A 204 nt4.44□□□□□ -1.7
TY1A-PR3Q6Q5H1 DPB3YBR278W 606 nt4.44□□□□□ -1.7
TY1A-PR3Q6Q5H1 PSP1YDR505C 2526 nt4.44□□□□□ -1.7
TY1A-PR3Q6Q5H1 KAP114YGL241W 3015 nt4.44□□□□□ -1.7
TY1A-PR3Q6Q5H1 GSM1YJL103C 1857 nt4.43□□□□□ -1.7
TY1A-PR3Q6Q5H1 ERG5YMR015C 1617 nt4.43□□□□□ -1.7
TY1A-PR3Q6Q5H1 NAM2YLR382C 2685 nt4.43□□□□□ -1.7
TY1A-PR3Q6Q5H1 PDR10YOR328W 4695 nt4.43□□□□□ -1.7
TY1A-PR3Q6Q5H1 CRT10YOL063C 2874 nt4.43□□□□□ -1.7
TY1A-PR3Q6Q5H1 RPS14AYCR031C 414 nt4.43□□□□□ -1.7
TY1A-PR3Q6Q5H1 YDR340WYDR340W 303 nt4.43□□□□□ -1.7
TY1A-PR3Q6Q5H1 YHL037CYHL037C 402 nt4.43□□□□□ -1.7
TY1A-PR3Q6Q5H1 NBL1YHR199C-A 222 nt4.43□□□□□ -1.7
TY1A-PR3Q6Q5H1 IRC18YJL037W 675 nt4.43□□□□□ -1.7
TY1A-PR3Q6Q5H1 RPL43BYJR094W-A 279 nt4.43□□□□□ -1.7
TY1A-PR3Q6Q5H1 BUD28YLR062C 378 nt4.43□□□□□ -1.7
TY1A-PR3Q6Q5H1 RNH201YNL072W 924 nt4.43□□□□□ -1.7
TY1A-PR3Q6Q5H1 YNL285WYNL285W 372 nt4.43□□□□□ -1.7
TY1A-PR3Q6Q5H1 INO4YOL108C 456 nt4.43□□□□□ -1.7
TY1A-PR3Q6Q5H1 YOR082CYOR082C 342 nt4.43□□□□□ -1.7
TY1A-PR3Q6Q5H1 RPC40YPR110C 1008 nt4.43□□□□□ -1.7
TY1A-PR3Q6Q5H1 PHO88YBR106W 567 nt4.43□□□□□ -1.7
TY1A-PR3Q6Q5H1 YCL021W-AYCL021W-A 378 nt4.43□□□□□ -1.7
TY1A-PR3Q6Q5H1 TEF1YPR080W 1377 nt4.42□□□□□ -1.7
TY1A-PR3Q6Q5H1 TEF2YBR118W 1377 nt4.42□□□□□ -1.7
TY1A-PR3Q6Q5H1 GLT1YDL171C 6438 nt4.42□□□□□ -1.7
TY1A-PR3Q6Q5H1 VPS45YGL095C 1734 nt4.42□□□□□ -1.7
TY1A-PR3Q6Q5H1 YHL026CYHL026C 948 nt4.42□□□□□ -1.7
TY1A-PR3Q6Q5H1 NIT2YJL126W 924 nt4.42□□□□□ -1.7
TY1A-PR3Q6Q5H1 CPS1YJL172W 1731 nt4.42□□□□□ -1.7
TY1A-PR3Q6Q5H1 AYT1YLL063C 1425 nt4.42□□□□□ -1.7
TY1A-PR3Q6Q5H1 PBA1YLR199C 831 nt4.42□□□□□ -1.7
TY1A-PR3Q6Q5H1 CBF5YLR175W 1452 nt4.42□□□□□ -1.7
TY1A-PR3Q6Q5H1 PEP7YDR323C 1548 nt4.41□□□□□ -1.7
TY1A-PR3Q6Q5H1 MRH1YDR033W 963 nt4.41□□□□□ -1.7
TY1A-PR3Q6Q5H1 VOA1YGR106C 798 nt4.41□□□□□ -1.7
TY1A-PR3Q6Q5H1 YLR269CYLR269C 351 nt4.41□□□□□ -1.7
TY1A-PR3Q6Q5H1 CIN4YMR138W 576 nt4.41□□□□□ -1.7
TY1A-PR3Q6Q5H1 AAR2YBL074C 1068 nt4.41□□□□□ -1.7
TY1A-PR3Q6Q5H1 OPY2YPR075C 1083 nt4.41□□□□□ -1.7
TY1A-PR3Q6Q5H1 QCR2YPR191W 1107 nt4.41□□□□□ -1.7
TY1A-PR3Q6Q5H1 FLC1YPL221W 2382 nt4.41□□□□□ -1.7
TY1A-PR3Q6Q5H1 SCY1YGL083W 2415 nt4.41□□□□□ -1.7
TY1A-PR3Q6Q5H1 KIP2YPL155C 2121 nt4.4□□□□□ -1.7
TY1A-PR3Q6Q5H1 OSW2YLR054C 2175 nt4.4□□□□□ -1.7
TY1A-PR3Q6Q5H1 IRC2YDR112W 309 nt4.4□□□□□ -1.71
TY1A-PR3Q6Q5H1 PEX4YGR133W 552 nt4.4□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 19.5 ms