RNA–Protein interactions for RNA: YDR505C

PSP1, Transcript of Asn and gln rich protein of unknown function, yeastyeast

Gene PSP1, Length 2,526 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PSP1YDR505C DRS1P32892 752 aaKnown RBP9.19□□□□□ -0.94
PSP1YDR505C MTC1P47018 478 aaKnown RBP8.87□□□□□ -0.99
PSP1YDR505C BFR2Q06631 534 aaKnown RBP8.09□□□□□ -1.11
PSP1YDR505C TFA1P36100 482 aa7.98□□□□□ -1.13
PSP1YDR505C AVT3P36062 692 aa7.83□□□□□ -1.16
PSP1YDR505C DIP2Q12220 943 aaPredicted RBP7.74□□□□□ -1.17
PSP1YDR505C FAP1P53971 965 aa7.4□□□□□ -1.23
PSP1YDR505C RSE1Q04693 1361 aaKnown RBP7.16□□□□□ -1.26
PSP1YDR505C ISW2Q08773 1120 aa7.05□□□□□ -1.28
PSP1YDR505C PRI1P10363 409 aa6.98□□□□□ -1.29
PSP1YDR505C RPG1P38249 964 aaKnown RBP6.97□□□□□ -1.29
PSP1YDR505C RQC2Q12532 1038 aaKnown RBP6.96□□□□□ -1.29
PSP1YDR505C PRY3P47033 881 aa6.94□□□□□ -1.3
PSP1YDR505C AAD16Q02895 342 aa6.92□□□□□ -1.3
PSP1YDR505C RPL17AP05740 184 aaKnown RBP6.86□□□□□ -1.31
PSP1YDR505C RPL17BP46990 184 aaKnown RBP6.86□□□□□ -1.31
PSP1YDR505C SPT21P35209 758 aa6.79□□□□□ -1.32
PSP1YDR505C RIM101P33400 625 aa6.75□□□□□ -1.33
PSP1YDR505C REB1P21538 810 aa6.7□□□□□ -1.34
PSP1YDR505C DMA1P38823 416 aa6.65□□□□□ -1.35
PSP1YDR505C PTP3P40048 928 aa6.61□□□□□ -1.35
PSP1YDR505C TSR3Q12094 313 aaKnown RBP6.61□□□□□ -1.35
PSP1YDR505C OXP1P28273 1286 aa6.55□□□□□ -1.36
PSP1YDR505C YCK3P39962 524 aa6.55□□□□□ -1.36
PSP1YDR505C SSP1P38871 571 aa6.54□□□□□ -1.36
PSP1YDR505C HAA1Q12753 694 aaKnown RBP6.51□□□□□ -1.37
PSP1YDR505C YKR023WP36119 530 aaKnown RBP6.47□□□□□ -1.37
PSP1YDR505C YLR271WQ06152 274 aa6.42□□□□□ -1.38
PSP1YDR505C MRPL32P25348 183 aa6.35□□□□□ -1.39
PSP1YDR505C YAH1Q12184 172 aaKnown RBP6.35□□□□□ -1.39
PSP1YDR505C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
PSP1YDR505C SAS10Q12136 610 aaPredicted RBP6.32□□□□□ -1.4
PSP1YDR505C TFC8Q12308 588 aa6.32□□□□□ -1.4
PSP1YDR505C TAF7Q05021 590 aa6.31□□□□□ -1.4
PSP1YDR505C YIL055CP40523 627 aaKnown RBP6.3□□□□□ -1.4
PSP1YDR505C MGA2P40578 1113 aa6.3□□□□□ -1.4
PSP1YDR505C LEO1P38439 464 aa6.29□□□□□ -1.4
PSP1YDR505C RSM7P47150 247 aa6.28□□□□□ -1.4
PSP1YDR505C HOP09932 586 aa6.25□□□□□ -1.41
PSP1YDR505C PSD2P53037 1138 aaKnown RBP6.24□□□□□ -1.41
PSP1YDR505C CST9Q06032 482 aa6.24□□□□□ -1.41
PSP1YDR505C CDC27P38042 758 aa6.21□□□□□ -1.42
PSP1YDR505C DCD1P06773 312 aa6.21□□□□□ -1.42
PSP1YDR505C LEU3P08638 886 aa6.19□□□□□ -1.42
PSP1YDR505C AI2P03876 854 aa6.16□□□□□ -1.42
PSP1YDR505C BCH2P36122 765 aa6.15□□□□□ -1.43
PSP1YDR505C RAM2P29703 316 aa6.07□□□□□ -1.44
PSP1YDR505C YGL015CP33199 130 aa6.05□□□□□ -1.44
PSP1YDR505C BBC1P47068 1157 aa6.03□□□□□ -1.44
PSP1YDR505C EPS1P40557 701 aa6.03□□□□□ -1.44
PSP1YDR505C YPR148CQ06523 435 aa6.02□□□□□ -1.45
PSP1YDR505C RCR1P38212 213 aa6.01□□□□□ -1.45
PSP1YDR505C BDF1P35817 686 aa6□□□□□ -1.45
PSP1YDR505C SET1P38827 1080 aaKnown RBP5.98□□□□□ -1.45
PSP1YDR505C MRM1P25270 412 aa5.96□□□□□ -1.45
PSP1YDR505C MAK11P20484 414 aaKnown RBP5.93□□□□□ -1.46
PSP1YDR505C RPN1P38764 993 aaKnown RBP5.93□□□□□ -1.46
PSP1YDR505C RTG3P38165 486 aa5.92□□□□□ -1.46
PSP1YDR505C CKB1P43639 278 aa5.92□□□□□ -1.46
PSP1YDR505C VPS29P38759 282 aa5.9□□□□□ -1.47
PSP1YDR505C IFH1P39520 1085 aa5.9□□□□□ -1.47
PSP1YDR505C SCY1P53009 804 aa5.89□□□□□ -1.47
PSP1YDR505C UBP10P53874 792 aaPredicted RBP5.89□□□□□ -1.47
PSP1YDR505C DSF2P38213 736 aa5.87□□□□□ -1.47
PSP1YDR505C VPS70P47161 811 aa5.87□□□□□ -1.47
PSP1YDR505C MAP2P38174 421 aaKnown RBP5.87□□□□□ -1.47
PSP1YDR505C DMA2P53924 522 aa5.83□□□□□ -1.48
PSP1YDR505C NOP53Q12080 455 aaKnown RBP5.83□□□□□ -1.48
PSP1YDR505C COQ8P27697 501 aa5.83□□□□□ -1.48
PSP1YDR505C SPB4P25808 606 aaPredicted RBP5.82□□□□□ -1.48
PSP1YDR505C ABP1P15891 592 aaKnown RBP5.82□□□□□ -1.48
PSP1YDR505C STS1P38637 319 aa5.8□□□□□ -1.48
PSP1YDR505C PBS2P08018 668 aa5.79□□□□□ -1.48
PSP1YDR505C EDS1P38073 919 aa5.78□□□□□ -1.48
PSP1YDR505C YMR1P47147 688 aaKnown RBP RIP-Chip data5.77□□□□□ -1.49not detected
PSP1YDR505C SLX5P32828 619 aaKnown RBP5.75□□□□□ -1.49
PSP1YDR505C YNR021WP53723 404 aaKnown RBP5.75□□□□□ -1.49
PSP1YDR505C NUP42P49686 430 aaKnown RBP5.74□□□□□ -1.49
PSP1YDR505C NSR1P27476 414 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
PSP1YDR505C DBP1P24784 617 aaKnown RBP5.72□□□□□ -1.49
PSP1YDR505C AIM7Q12156 149 aa5.72□□□□□ -1.49
PSP1YDR505C REF2P42073 533 aaPredicted RBP5.71□□□□□ -1.5
PSP1YDR505C KIN1P13185 1064 aa5.7□□□□□ -1.5
PSP1YDR505C MAM3Q12296 706 aa5.69□□□□□ -1.5
PSP1YDR505C DIT2P21595 489 aa5.69□□□□□ -1.5
PSP1YDR505C PTC3P34221 468 aaKnown RBP5.69□□□□□ -1.5
PSP1YDR505C MIF2P35201 549 aa5.69□□□□□ -1.5
PSP1YDR505C COX6P00427 148 aa5.68□□□□□ -1.5
PSP1YDR505C YFR006WP43590 535 aa5.68□□□□□ -1.5
PSP1YDR505C YOR238WQ08634 303 aa5.67□□□□□ -1.5
PSP1YDR505C MAK21Q12176 1025 aaKnown RBP5.67□□□□□ -1.5
PSP1YDR505C RLF2Q12495 606 aa5.67□□□□□ -1.5
PSP1YDR505C IES2P40154 320 aa5.67□□□□□ -1.5
PSP1YDR505C GLC3P32775 704 aa5.66□□□□□ -1.5
PSP1YDR505C YDR090CQ03193 310 aa5.65□□□□□ -1.5
PSP1YDR505C UBP14P38237 781 aaKnown RBP5.63□□□□□ -1.51
PSP1YDR505C TIF4632P39936 914 aaKnown RBP5.62□□□□□ -1.51
PSP1YDR505C VMA1P17255 1071 aaKnown RBP5.61□□□□□ -1.51
PSP1YDR505C GUA1P38625 525 aaKnown RBP5.61□□□□□ -1.51
PSP1YDR505C TGL3P40308 642 aa5.59□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms