Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC28.44■■■□□ 2.14
ZC3H6P61129 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
ZC3H6P61129 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC28.43■■■□□ 2.14
ZC3H6P61129 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC28.43■■■□□ 2.14
ZC3H6P61129 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
ZC3H6P61129 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC28.43■■■□□ 2.14
ZC3H6P61129 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
ZC3H6P61129 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
ZC3H6P61129 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC28.43■■■□□ 2.14
ZC3H6P61129 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
ZC3H6P61129 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
ZC3H6P61129 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC28.42■■■□□ 2.14
ZC3H6P61129 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
ZC3H6P61129 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
ZC3H6P61129 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC28.42■■■□□ 2.14
ZC3H6P61129 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC28.42■■■□□ 2.14
ZC3H6P61129 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
ZC3H6P61129 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
ZC3H6P61129 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC28.41■■■□□ 2.14
ZC3H6P61129 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
ZC3H6P61129 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC28.41■■■□□ 2.14
ZC3H6P61129 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
ZC3H6P61129 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC28.41■■■□□ 2.14
ZC3H6P61129 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
ZC3H6P61129 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
ZC3H6P61129 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
ZC3H6P61129 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
ZC3H6P61129 AC087742.1-201ENST00000575880 1738 ntBASIC28.4■■■□□ 2.14
ZC3H6P61129 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
ZC3H6P61129 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
ZC3H6P61129 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC28.4■■■□□ 2.14
ZC3H6P61129 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
ZC3H6P61129 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC28.4■■■□□ 2.14
ZC3H6P61129 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
ZC3H6P61129 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC28.4■■■□□ 2.14
ZC3H6P61129 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
ZC3H6P61129 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC28.4■■■□□ 2.14
ZC3H6P61129 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC28.4■■■□□ 2.14
ZC3H6P61129 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC28.4■■■□□ 2.14
ZC3H6P61129 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
ZC3H6P61129 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
ZC3H6P61129 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
ZC3H6P61129 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC28.4■■■□□ 2.14
ZC3H6P61129 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC28.39■■■□□ 2.14
ZC3H6P61129 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.14
ZC3H6P61129 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
ZC3H6P61129 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC28.39■■■□□ 2.14
ZC3H6P61129 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
ZC3H6P61129 NME6-213ENST00000451657 871 ntTSL 2 BASIC28.39■■■□□ 2.14
ZC3H6P61129 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC28.39■■■□□ 2.14
ZC3H6P61129 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC28.39■■■□□ 2.14
ZC3H6P61129 CD44-222ENST00000526025 1052 ntTSL 2 BASIC28.39■■■□□ 2.14
ZC3H6P61129 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC28.39■■■□□ 2.14
ZC3H6P61129 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
ZC3H6P61129 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
ZC3H6P61129 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
ZC3H6P61129 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC28.39■■■□□ 2.13
ZC3H6P61129 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
ZC3H6P61129 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
ZC3H6P61129 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
ZC3H6P61129 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
ZC3H6P61129 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
ZC3H6P61129 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC28.38■■■□□ 2.13
ZC3H6P61129 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC28.38■■■□□ 2.13
ZC3H6P61129 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
ZC3H6P61129 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
ZC3H6P61129 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
ZC3H6P61129 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
ZC3H6P61129 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC28.37■■■□□ 2.13
ZC3H6P61129 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
ZC3H6P61129 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC28.37■■■□□ 2.13
ZC3H6P61129 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC28.37■■■□□ 2.13
ZC3H6P61129 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC28.37■■■□□ 2.13
ZC3H6P61129 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
ZC3H6P61129 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC28.36■■■□□ 2.13
ZC3H6P61129 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
ZC3H6P61129 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
ZC3H6P61129 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC28.36■■■□□ 2.13
ZC3H6P61129 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC28.36■■■□□ 2.13
ZC3H6P61129 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC28.36■■■□□ 2.13
ZC3H6P61129 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
ZC3H6P61129 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC28.36■■■□□ 2.13
ZC3H6P61129 AC060766.5-201ENST00000590539 871 ntBASIC28.36■■■□□ 2.13
ZC3H6P61129 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
ZC3H6P61129 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC28.35■■■□□ 2.13
ZC3H6P61129 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC28.35■■■□□ 2.13
ZC3H6P61129 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC28.35■■■□□ 2.13
ZC3H6P61129 RPPH1-201ENST00000516869 333 ntBASIC28.35■■■□□ 2.13
ZC3H6P61129 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
ZC3H6P61129 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
ZC3H6P61129 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
ZC3H6P61129 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
ZC3H6P61129 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
ZC3H6P61129 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC28.34■■■□□ 2.13
ZC3H6P61129 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC28.34■■■□□ 2.13
ZC3H6P61129 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
ZC3H6P61129 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC28.34■■■□□ 2.13
ZC3H6P61129 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
ZC3H6P61129 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC28.34■■■□□ 2.13
ZC3H6P61129 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC28.33■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms