RNA–Protein interactions for RNA: ENST00000407714.1

GPR35-203, Transcript of G protein-coupled receptor 35, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPR35, Length 1,258 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPR35-203ENST00000407714 NISCHQ9Y2I1 1504 aa49.31■■■■■ 5.48
GPR35-203ENST00000407714 CCDC180Q9P1Z9 1646 aa44.2■■■■■ 4.67
GPR35-203ENST00000407714 ABCC9O60706 1549 aa44.09■■■■■ 4.65
GPR35-203ENST00000407714 RB1CC1Q8TDY2 1594 aa42.03■■■■■ 4.32
GPR35-203ENST00000407714 NACADO15069 1562 aa41.79■■■■■ 4.28
GPR35-203ENST00000407714 DCAF8L2P0C7V8 631 aa41.56■■■■■ 4.24
GPR35-203ENST00000407714 DNAJC5BQ9UF47 199 aa41.29■■■■■ 4.2
GPR35-203ENST00000407714 MYO15BQ96JP2 1530 aa41.28■■■■■ 4.2
GPR35-203ENST00000407714 PABPN1Q86U42 306 aaKnown RBP eCLIP41.07■■■■■ 4.17
GPR35-203ENST00000407714 UNC13AQ9UPW8 1703 aa41.04■■■■■ 4.16
GPR35-203ENST00000407714 ZCCHC6Q5VYS8 1495 aaKnown RBP40.89■■■■■ 4.14
GPR35-203ENST00000407714 BICRAQ9NZM4 1560 aa40.79■■■■■ 4.12
GPR35-203ENST00000407714 DCAF1Q9Y4B6 1507 aa40.77■■■■■ 4.12
GPR35-203ENST00000407714 SHROOM4Q9ULL8 1493 aa40.31■■■■■ 4.04
GPR35-203ENST00000407714 SCRIBQ14160 1630 aa40.24■■■■■ 4.03
GPR35-203ENST00000407714 CC2D2AQ9P2K1 1620 aa39.83■■■■□ 3.97
GPR35-203ENST00000407714 EIF4G1Q04637 1599 aaKnown RBP39.79■■■■□ 3.96
GPR35-203ENST00000407714 CECR2Q9BXF3 1484 aa39.72■■■■□ 3.95
GPR35-203ENST00000407714 NCAPD3P42695 1498 aa38.6■■■■□ 3.77
GPR35-203ENST00000407714 ATAD2BQ9ULI0 1458 aa38.47■■■■□ 3.75
GPR35-203ENST00000407714 SMARCA4P51532 1647 aa38.43■■■■□ 3.74
GPR35-203ENST00000407714 SMARCA2P51531 1590 aa38.36■■■■□ 3.73
GPR35-203ENST00000407714 HMGXB3Q12766 1538 aa38.28■■■■□ 3.72
GPR35-203ENST00000407714 BAZ1AQ9NRL2 1556 aaPredicted RBP38.27■■■■□ 3.72
GPR35-203ENST00000407714 PEG3Q9GZU2 1588 aa38.09■■■■□ 3.69
GPR35-203ENST00000407714 BAZ1BQ9UIG0 1483 aaKnown RBP38.09■■■■□ 3.69
GPR35-203ENST00000407714 ERCC6Q03468 1493 aa38.06■■■■□ 3.68
GPR35-203ENST00000407714 CUX2O14529 1486 aa37.99■■■■□ 3.67
GPR35-203ENST00000407714 MROH2BQ7Z745 1585 aa37.98■■■■□ 3.67
GPR35-203ENST00000407714 NESP48681 1621 aa37.89■■■■□ 3.66
GPR35-203ENST00000407714 DNAJC5Q9H3Z4 198 aa37.88■■■■□ 3.65
GPR35-203ENST00000407714 LAMC3Q9Y6N6 1575 aa37.68■■■■□ 3.62
GPR35-203ENST00000407714 WIZO95785 1651 aa37.5■■■■□ 3.59
GPR35-203ENST00000407714 THOC2Q8NI27 1593 aaKnown RBP37.49■■■■□ 3.59
GPR35-203ENST00000407714 PDS5BQ9NTI5 1447 aa37.48■■■■□ 3.59
GPR35-203ENST00000407714 CADPSQ9ULU8 1353 aa37.42■■■■□ 3.58
GPR35-203ENST00000407714 KIF21AQ7Z4S6 1674 aa37.4■■■■□ 3.58
GPR35-203ENST00000407714 RSF1Q96T23 1441 aaPredicted RBP37.25■■■■□ 3.55
GPR35-203ENST00000407714 MRC2Q9UBG0 1479 aa37.13■■■■□ 3.53
GPR35-203ENST00000407714 TOP2AP11388 1531 aaKnown RBP37.07■■■■□ 3.53
GPR35-203ENST00000407714 WDR62O43379 1518 aa37.03■■■■□ 3.52
GPR35-203ENST00000407714 CFTRP13569 1480 aa37.01■■■■□ 3.51
GPR35-203ENST00000407714 CEP164Q9UPV0 1460 aa37■■■■□ 3.51
GPR35-203ENST00000407714 FANCD2Q9BXW9 1451 aa36.96■■■■□ 3.51
GPR35-203ENST00000407714 CCDC88BA6NC98 1476 aa36.66■■■■□ 3.46
GPR35-203ENST00000407714 URB2Q14146 1524 aaKnown RBP36.64■■■■□ 3.46
GPR35-203ENST00000407714 PRDM2Q13029 1718 aa36.59■■■■□ 3.45
GPR35-203ENST00000407714 OSCARQ8IYS5 282 aa36.29■■■■□ 3.4
GPR35-203ENST00000407714 TOPBP1Q92547 1522 aa36.28■■■■□ 3.4
GPR35-203ENST00000407714 IFT140Q96RY7 1462 aa36.27■■■■□ 3.4
GPR35-203ENST00000407714 ABCC8Q09428 1581 aa36.25■■■■□ 3.39
GPR35-203ENST00000407714 TRIM41Q8WV44 630 aa36.2■■■■□ 3.39
GPR35-203ENST00000407714 ZNF608Q9ULD9 1512 aaPredicted RBP36.17■■■■□ 3.38
GPR35-203ENST00000407714 DNMBPQ6XZF7 1577 aa36.15■■■■□ 3.38
GPR35-203ENST00000407714 EIF4G3O43432 1585 aaKnown RBP35.97■■■■□ 3.35
GPR35-203ENST00000407714 TARBP1Q13395 1621 aaKnown RBP35.95■■■■□ 3.35
GPR35-203ENST00000407714 POLA1P09884 1462 aaPredicted RBP35.92■■■■□ 3.34
GPR35-203ENST00000407714 AQRO60306 1485 aaKnown RBP eCLIP35.87■■■■□ 3.339e-6■■□□□ 13.1
GPR35-203ENST00000407714 SOGA1O94964 1423 aa35.76■■■■□ 3.32
GPR35-203ENST00000407714 RAD54L2Q9Y4B4 1467 aa35.76■■■■□ 3.32
GPR35-203ENST00000407714 RIMBP3CA6NJZ7 1639 aa35.75■■■■□ 3.31
GPR35-203ENST00000407714 RIMBP3BA6NNM3 1639 aa35.75■■■■□ 3.31
GPR35-203ENST00000407714 RIMBP3Q9UFD9 1639 aa35.75■■■■□ 3.31
GPR35-203ENST00000407714 FGD5Q6ZNL6 1462 aa35.69■■■■□ 3.3
GPR35-203ENST00000407714 CUX1P39880 1505 aa35.67■■■■□ 3.3
GPR35-203ENST00000407714 ARHGEF11O15085 1522 aa35.67■■■■□ 3.3
GPR35-203ENST00000407714 CHD1O14646 1710 aa35.66■■■■□ 3.3
GPR35-203ENST00000407714 TDRD9Q8NDG6 1382 aaKnown RBP35.66■■■■□ 3.3
GPR35-203ENST00000407714 SUPT5HO00267 1087 aaKnown RBP35.64■■■■□ 3.3
GPR35-203ENST00000407714 WDR97A6NE52 1622 aa35.61■■■■□ 3.29
GPR35-203ENST00000407714 FBLN2P98095 1184 aa35.61■■■■□ 3.29
GPR35-203ENST00000407714 SNAPC4Q5SXM2 1469 aa35.49■■■■□ 3.27
GPR35-203ENST00000407714 GRIN2BQ13224 1484 aa35.44■■■■□ 3.26
GPR35-203ENST00000407714 MAGI1Q96QZ7 1491 aaPredicted RBP35.43■■■■□ 3.26
GPR35-203ENST00000407714 CYB5RLQ6IPT4 315 aa35.42■■■■□ 3.26
GPR35-203ENST00000407714 CHMP7Q8WUX9 453 aaPredicted RBP35.39■■■■□ 3.26
GPR35-203ENST00000407714 GAPVD1Q14C86 1478 aa35.33■■■■□ 3.25
GPR35-203ENST00000407714 ARAP1Q96P48 1450 aa35.32■■■■□ 3.24
GPR35-203ENST00000407714 ABCA10Q8WWZ4 1543 aa35.32■■■■□ 3.24
GPR35-203ENST00000407714 SYNJ2O15056 1496 aa35.31■■■■□ 3.24
GPR35-203ENST00000407714 CLASP1Q7Z460 1538 aa35.3■■■■□ 3.24
GPR35-203ENST00000407714 SYNJ1O43426 1573 aa35.29■■■■□ 3.24
GPR35-203ENST00000407714 PBRM1Q86U86 1689 aa35.26■■■■□ 3.23
GPR35-203ENST00000407714 ABCA5Q8WWZ7 1642 aa35.23■■■■□ 3.23
GPR35-203ENST00000407714 WRNQ14191 1432 aaPredicted RBP eCLIP35.2■■■■□ 3.23
GPR35-203ENST00000407714 TOP2BQ02880 1626 aa35.14■■■■□ 3.22
GPR35-203ENST00000407714 BIVM-ERCC5R4GMW8 1640 aa35.14■■■■□ 3.22
GPR35-203ENST00000407714 GRIN2AQ12879 1464 aa34.98■■■■□ 3.19
GPR35-203ENST00000407714 TRHP20396 242 aaPredicted RBP34.97■■■■□ 3.19
GPR35-203ENST00000407714 ADAMTS12P58397 1594 aa34.95■■■■□ 3.18
GPR35-203ENST00000407714 FHAD1B1AJZ9 1412 aa34.89■■■■□ 3.18
GPR35-203ENST00000407714 ERICH3Q5RHP9 1530 aa34.88■■■■□ 3.17
GPR35-203ENST00000407714 NUP160Q12769 1436 aa34.88■■■■□ 3.17
GPR35-203ENST00000407714 CEP170Q5SW79 1584 aa34.83■■■■□ 3.17
GPR35-203ENST00000407714 ERCC6L2Q5T890 1561 aa34.73■■■■□ 3.15
GPR35-203ENST00000407714 SHROOM2Q13796 1616 aa34.69■■■■□ 3.14
GPR35-203ENST00000407714 JPH4Q96JJ6 628 aa34.53■■■■□ 3.12
GPR35-203ENST00000407714 PRG4Q92954 1404 aaPredicted RBP34.51■■■■□ 3.12
GPR35-203ENST00000407714 KIF27Q86VH2 1401 aa34.48■■■■□ 3.11
GPR35-203ENST00000407714 IGF1RP08069 1367 aa34.47■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms