RNA–Protein interactions for RNA: ENST00000400043.3

CYYR1-202, Transcript of cysteine and tyrosine rich 1, humanhuman

TSL 1 (best) BASIC

Gene CYYR1, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYYR1-202ENST00000400043 NISCHQ9Y2I1 1504 aa49.29■■■■■ 5.48
CYYR1-202ENST00000400043 CCDC180Q9P1Z9 1646 aa43.93■■■■■ 4.62
CYYR1-202ENST00000400043 ABCC9O60706 1549 aa43.15■■■■■ 4.5
CYYR1-202ENST00000400043 RB1CC1Q8TDY2 1594 aa41.46■■■■■ 4.23
CYYR1-202ENST00000400043 DCAF8L2P0C7V8 631 aa41.43■■■■■ 4.22
CYYR1-202ENST00000400043 NACADO15069 1562 aa41.34■■■■■ 4.21
CYYR1-202ENST00000400043 ZCCHC6Q5VYS8 1495 aaKnown RBP41■■■■■ 4.15
CYYR1-202ENST00000400043 MYO15BQ96JP2 1530 aa40.99■■■■■ 4.15
CYYR1-202ENST00000400043 DCAF1Q9Y4B6 1507 aa40.76■■■■■ 4.12
CYYR1-202ENST00000400043 UNC13AQ9UPW8 1703 aa40.53■■■■■ 4.08
CYYR1-202ENST00000400043 PABPN1Q86U42 306 aaKnown RBP eCLIP40.32■■■■■ 4.05
CYYR1-202ENST00000400043 BICRAQ9NZM4 1560 aa40.13■■■■■ 4.01
CYYR1-202ENST00000400043 SCRIBQ14160 1630 aa40.08■■■■■ 4.01
CYYR1-202ENST00000400043 DNAJC5BQ9UF47 199 aa39.72■■■■□ 3.95
CYYR1-202ENST00000400043 SHROOM4Q9ULL8 1493 aa39.69■■■■□ 3.94
CYYR1-202ENST00000400043 EIF4G1Q04637 1599 aaKnown RBP39.12■■■■□ 3.85
CYYR1-202ENST00000400043 CC2D2AQ9P2K1 1620 aa39.03■■■■□ 3.84
CYYR1-202ENST00000400043 CECR2Q9BXF3 1484 aa38.79■■■■□ 3.8
CYYR1-202ENST00000400043 SMARCA4P51532 1647 aa38.3■■■■□ 3.72
CYYR1-202ENST00000400043 BAZ1AQ9NRL2 1556 aaPredicted RBP38.25■■■■□ 3.71
CYYR1-202ENST00000400043 NCAPD3P42695 1498 aa38.12■■■■□ 3.69
CYYR1-202ENST00000400043 ATAD2BQ9ULI0 1458 aa38.11■■■■□ 3.69
CYYR1-202ENST00000400043 SMARCA2P51531 1590 aa38.1■■■■□ 3.69
CYYR1-202ENST00000400043 MROH2BQ7Z745 1585 aa37.98■■■■□ 3.67
CYYR1-202ENST00000400043 HMGXB3Q12766 1538 aa37.91■■■■□ 3.66
CYYR1-202ENST00000400043 PEG3Q9GZU2 1588 aa37.89■■■■□ 3.66
CYYR1-202ENST00000400043 BAZ1BQ9UIG0 1483 aaKnown RBP37.84■■■■□ 3.65
CYYR1-202ENST00000400043 WIZO95785 1651 aa37.62■■■■□ 3.61
CYYR1-202ENST00000400043 RSF1Q96T23 1441 aaPredicted RBP37.48■■■■□ 3.59
CYYR1-202ENST00000400043 NESP48681 1621 aa37.27■■■■□ 3.56
CYYR1-202ENST00000400043 ERCC6Q03468 1493 aa37.25■■■■□ 3.55
CYYR1-202ENST00000400043 LAMC3Q9Y6N6 1575 aa37.18■■■■□ 3.54
CYYR1-202ENST00000400043 TOP2AP11388 1531 aaKnown RBP37.17■■■■□ 3.54
CYYR1-202ENST00000400043 CADPSQ9ULU8 1353 aa37.03■■■■□ 3.52
CYYR1-202ENST00000400043 PDS5BQ9NTI5 1447 aa36.95■■■■□ 3.51
CYYR1-202ENST00000400043 KIF21AQ7Z4S6 1674 aa36.87■■■■□ 3.49
CYYR1-202ENST00000400043 CUX2O14529 1486 aa36.86■■■■□ 3.49
CYYR1-202ENST00000400043 CCDC88BA6NC98 1476 aa36.75■■■■□ 3.47
CYYR1-202ENST00000400043 CFTRP13569 1480 aa36.74■■■■□ 3.47
CYYR1-202ENST00000400043 THOC2Q8NI27 1593 aaKnown RBP36.72■■■■□ 3.47
CYYR1-202ENST00000400043 FANCD2Q9BXW9 1451 aa36.61■■■■□ 3.45
CYYR1-202ENST00000400043 CEP164Q9UPV0 1460 aa36.58■■■■□ 3.45
CYYR1-202ENST00000400043 SUPT5HO00267 1087 aaKnown RBP36.55■■■■□ 3.44
CYYR1-202ENST00000400043 MRC2Q9UBG0 1479 aa36.55■■■■□ 3.44
CYYR1-202ENST00000400043 PRDM2Q13029 1718 aa36.54■■■■□ 3.44
CYYR1-202ENST00000400043 WDR62O43379 1518 aa36.41■■■■□ 3.42
CYYR1-202ENST00000400043 URB2Q14146 1524 aaKnown RBP36.22■■■■□ 3.39
CYYR1-202ENST00000400043 ABCC8Q09428 1581 aa36.03■■■■□ 3.36
CYYR1-202ENST00000400043 TOPBP1Q92547 1522 aa35.99■■■■□ 3.35
CYYR1-202ENST00000400043 DNAJC5Q9H3Z4 198 aa35.95■■■■□ 3.35
CYYR1-202ENST00000400043 DNMBPQ6XZF7 1577 aa35.94■■■■□ 3.34
CYYR1-202ENST00000400043 IFT140Q96RY7 1462 aa35.82■■■■□ 3.32
CYYR1-202ENST00000400043 POLA1P09884 1462 aaPredicted RBP35.67■■■■□ 3.3
CYYR1-202ENST00000400043 ZNF608Q9ULD9 1512 aaPredicted RBP35.64■■■■□ 3.3
CYYR1-202ENST00000400043 CUX1P39880 1505 aa35.63■■■■□ 3.29
CYYR1-202ENST00000400043 TARBP1Q13395 1621 aaKnown RBP35.6■■■■□ 3.29
CYYR1-202ENST00000400043 SOGA1O94964 1423 aa35.57■■■■□ 3.29
CYYR1-202ENST00000400043 FGD5Q6ZNL6 1462 aa35.57■■■■□ 3.28
CYYR1-202ENST00000400043 RAD54L2Q9Y4B4 1467 aa35.54■■■■□ 3.28
CYYR1-202ENST00000400043 EIF4G3O43432 1585 aaKnown RBP35.51■■■■□ 3.28
CYYR1-202ENST00000400043 AQRO60306 1485 aaKnown RBP eCLIP35.46■■■■□ 3.27
CYYR1-202ENST00000400043 OSCARQ8IYS5 282 aa35.39■■■■□ 3.26
CYYR1-202ENST00000400043 WRNQ14191 1432 aaPredicted RBP eCLIP35.39■■■■□ 3.26
CYYR1-202ENST00000400043 TDRD9Q8NDG6 1382 aaKnown RBP35.38■■■■□ 3.25
CYYR1-202ENST00000400043 WDR97A6NE52 1622 aa35.33■■■■□ 3.25
CYYR1-202ENST00000400043 TOP2BQ02880 1626 aa35.32■■■■□ 3.25
CYYR1-202ENST00000400043 BIVM-ERCC5R4GMW8 1640 aa35.32■■■■□ 3.25
CYYR1-202ENST00000400043 SYNJ1O43426 1573 aa35.28■■■■□ 3.24
CYYR1-202ENST00000400043 ABCA10Q8WWZ4 1543 aa35.21■■■■□ 3.23
CYYR1-202ENST00000400043 FBLN2P98095 1184 aa35.17■■■■□ 3.22
CYYR1-202ENST00000400043 GRIN2BQ13224 1484 aa35.16■■■■□ 3.22
CYYR1-202ENST00000400043 CHD1O14646 1710 aa35.15■■■■□ 3.22
CYYR1-202ENST00000400043 GAPVD1Q14C86 1478 aa35.14■■■■□ 3.22
CYYR1-202ENST00000400043 SNAPC4Q5SXM2 1469 aa35.11■■■■□ 3.21
CYYR1-202ENST00000400043 PBRM1Q86U86 1689 aa35.11■■■■□ 3.21
CYYR1-202ENST00000400043 ABCA5Q8WWZ7 1642 aa35.07■■■■□ 3.21
CYYR1-202ENST00000400043 MAGI1Q96QZ7 1491 aaPredicted RBP35.07■■■■□ 3.2
CYYR1-202ENST00000400043 CHMP7Q8WUX9 453 aaPredicted RBP35.02■■■■□ 3.2
CYYR1-202ENST00000400043 SYNJ2O15056 1496 aa34.93■■■■□ 3.18
CYYR1-202ENST00000400043 ERICH3Q5RHP9 1530 aa34.8■■■■□ 3.16
CYYR1-202ENST00000400043 RIMBP3CA6NJZ7 1639 aa34.78■■■■□ 3.16
CYYR1-202ENST00000400043 RIMBP3BA6NNM3 1639 aa34.78■■■■□ 3.16
CYYR1-202ENST00000400043 RIMBP3Q9UFD9 1639 aa34.78■■■■□ 3.16
CYYR1-202ENST00000400043 TRIM41Q8WV44 630 aa34.77■■■■□ 3.16
CYYR1-202ENST00000400043 ADAMTS12P58397 1594 aa34.75■■■■□ 3.15
CYYR1-202ENST00000400043 ARHGEF11O15085 1522 aa34.73■■■■□ 3.15
CYYR1-202ENST00000400043 FHAD1B1AJZ9 1412 aa34.72■■■■□ 3.15
CYYR1-202ENST00000400043 GRIN2AQ12879 1464 aa34.69■■■■□ 3.14
CYYR1-202ENST00000400043 CLASP1Q7Z460 1538 aa34.69■■■■□ 3.14
CYYR1-202ENST00000400043 KIF27Q86VH2 1401 aa34.68■■■■□ 3.14
CYYR1-202ENST00000400043 IGF1RP08069 1367 aa34.52■■■■□ 3.12
CYYR1-202ENST00000400043 CEP170Q5SW79 1584 aa34.51■■■■□ 3.12
CYYR1-202ENST00000400043 NUP160Q12769 1436 aa34.5■■■■□ 3.11
CYYR1-202ENST00000400043 CYB5RLQ6IPT4 315 aa34.5■■■■□ 3.11
CYYR1-202ENST00000400043 CUL7Q14999 1698 aa34.48■■■■□ 3.11
CYYR1-202ENST00000400043 ARAP1Q96P48 1450 aa34.42■■■■□ 3.1
CYYR1-202ENST00000400043 CARMIL1Q5VZK9 1371 aa34.36■■■■□ 3.09
CYYR1-202ENST00000400043 RUSC2Q8N2Y8 1516 aa34.29■■■■□ 3.08
CYYR1-202ENST00000400043 SHROOM2Q13796 1616 aa34.28■■■■□ 3.08
CYYR1-202ENST00000400043 JPH4Q96JJ6 628 aa34.25■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms