RNA–Protein interactions for RNA: ENST00000569241.5

DUX4-204, Transcript of double homeobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DUX4, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4-204ENST00000569241 NISCHQ9Y2I1 1504 aa49.62■■■■■ 5.53
DUX4-204ENST00000569241 CCDC180Q9P1Z9 1646 aa43.83■■■■■ 4.61
DUX4-204ENST00000569241 ABCC9O60706 1549 aa42.22■■■■■ 4.35
DUX4-204ENST00000569241 ZCCHC6Q5VYS8 1495 aaKnown RBP41.52■■■■■ 4.24
DUX4-204ENST00000569241 DCAF8L2P0C7V8 631 aa41.24■■■■■ 4.19
DUX4-204ENST00000569241 DCAF1Q9Y4B6 1507 aa40.97■■■■■ 4.15
DUX4-204ENST00000569241 NACADO15069 1562 aa40.93■■■■■ 4.14
DUX4-204ENST00000569241 RB1CC1Q8TDY2 1594 aa40.84■■■■■ 4.13
DUX4-204ENST00000569241 MYO15BQ96JP2 1530 aa40.82■■■■■ 4.12
DUX4-204ENST00000569241 UNC13AQ9UPW8 1703 aa40.21■■■■■ 4.03
DUX4-204ENST00000569241 SCRIBQ14160 1630 aa40.19■■■■■ 4.02
DUX4-204ENST00000569241 SHROOM4Q9ULL8 1493 aa39.84■■■■□ 3.97
DUX4-204ENST00000569241 BICRAQ9NZM4 1560 aa39.68■■■■□ 3.94
DUX4-204ENST00000569241 PABPN1Q86U42 306 aaKnown RBP eCLIP39.55■■■■□ 3.92
DUX4-204ENST00000569241 CECR2Q9BXF3 1484 aa38.65■■■■□ 3.78
DUX4-204ENST00000569241 EIF4G1Q04637 1599 aaKnown RBP38.54■■■■□ 3.76
DUX4-204ENST00000569241 SMARCA4P51532 1647 aa38.43■■■■□ 3.74
DUX4-204ENST00000569241 BAZ1AQ9NRL2 1556 aaPredicted RBP38.4■■■■□ 3.74
DUX4-204ENST00000569241 MROH2BQ7Z745 1585 aa38.33■■■■□ 3.73
DUX4-204ENST00000569241 CC2D2AQ9P2K1 1620 aa38.23■■■■□ 3.71
DUX4-204ENST00000569241 DNAJC5BQ9UF47 199 aa38.1■■■■□ 3.69
DUX4-204ENST00000569241 RSF1Q96T23 1441 aaPredicted RBP38.08■■■■□ 3.69
DUX4-204ENST00000569241 WIZO95785 1651 aa38.05■■■■□ 3.68
DUX4-204ENST00000569241 PEG3Q9GZU2 1588 aa37.93■■■■□ 3.66
DUX4-204ENST00000569241 ATAD2BQ9ULI0 1458 aa37.92■■■■□ 3.66
DUX4-204ENST00000569241 SMARCA2P51531 1590 aa37.9■■■■□ 3.66
DUX4-204ENST00000569241 SUPT5HO00267 1087 aaKnown RBP37.76■■■■□ 3.64
DUX4-204ENST00000569241 NCAPD3P42695 1498 aa37.71■■■■□ 3.63
DUX4-204ENST00000569241 BAZ1BQ9UIG0 1483 aaKnown RBP37.69■■■■□ 3.62
DUX4-204ENST00000569241 HMGXB3Q12766 1538 aa37.68■■■■□ 3.62
DUX4-204ENST00000569241 TOP2AP11388 1531 aaKnown RBP37.56■■■■□ 3.6
DUX4-204ENST00000569241 CCDC88BA6NC98 1476 aa37.1■■■■□ 3.53
DUX4-204ENST00000569241 NESP48681 1621 aa36.8■■■■□ 3.48
DUX4-204ENST00000569241 LAMC3Q9Y6N6 1575 aa36.69■■■■□ 3.46
DUX4-204ENST00000569241 PRDM2Q13029 1718 aa36.67■■■■□ 3.46
DUX4-204ENST00000569241 CADPSQ9ULU8 1353 aa36.66■■■■□ 3.46
DUX4-204ENST00000569241 CFTRP13569 1480 aa36.64■■■■□ 3.46
DUX4-204ENST00000569241 KIF21AQ7Z4S6 1674 aa36.49■■■■□ 3.43
DUX4-204ENST00000569241 FANCD2Q9BXW9 1451 aa36.33■■■■□ 3.41
DUX4-204ENST00000569241 PDS5BQ9NTI5 1447 aa36.32■■■■□ 3.4
DUX4-204ENST00000569241 ERCC6Q03468 1493 aa36.28■■■■□ 3.4
DUX4-204ENST00000569241 CEP164Q9UPV0 1460 aa36.22■■■■□ 3.39
DUX4-204ENST00000569241 ABCC8Q09428 1581 aa36.13■■■■□ 3.38
DUX4-204ENST00000569241 THOC2Q8NI27 1593 aaKnown RBP36.08■■■■□ 3.37
DUX4-204ENST00000569241 MRC2Q9UBG0 1479 aa36■■■■□ 3.35
DUX4-204ENST00000569241 URB2Q14146 1524 aaKnown RBP35.97■■■■□ 3.35
DUX4-204ENST00000569241 CUX1P39880 1505 aa35.91■■■■□ 3.34
DUX4-204ENST00000569241 SYNJ1O43426 1573 aa35.91■■■■□ 3.34
DUX4-204ENST00000569241 DNMBPQ6XZF7 1577 aa35.89■■■■□ 3.34
DUX4-204ENST00000569241 WDR62O43379 1518 aa35.88■■■■□ 3.34
DUX4-204ENST00000569241 WRNQ14191 1432 aaPredicted RBP eCLIP35.88■■■■□ 3.33
DUX4-204ENST00000569241 TOPBP1Q92547 1522 aa35.86■■■■□ 3.33
DUX4-204ENST00000569241 BIVM-ERCC5R4GMW8 1640 aa35.82■■■■□ 3.32
DUX4-204ENST00000569241 TOP2BQ02880 1626 aa35.79■■■■□ 3.32
DUX4-204ENST00000569241 FGD5Q6ZNL6 1462 aa35.66■■■■□ 3.3
DUX4-204ENST00000569241 POLA1P09884 1462 aaPredicted RBP35.62■■■■□ 3.29
DUX4-204ENST00000569241 CHIC1Q5VXU3 224 aa35.61■■■■□ 3.29
DUX4-204ENST00000569241 CUX2O14529 1486 aa35.53■■■■□ 3.28
DUX4-204ENST00000569241 TRIM41Q8WV44 630 aa35.51■■■■□ 3.28
DUX4-204ENST00000569241 RAD54L2Q9Y4B4 1467 aa35.5■■■■□ 3.27
DUX4-204ENST00000569241 TARBP1Q13395 1621 aaKnown RBP35.46■■■■□ 3.27
DUX4-204ENST00000569241 WDR97A6NE52 1622 aa35.44■■■■□ 3.26
DUX4-204ENST00000569241 SOGA1O94964 1423 aa35.4■■■■□ 3.26
DUX4-204ENST00000569241 IFT140Q96RY7 1462 aa35.37■■■■□ 3.25
DUX4-204ENST00000569241 ZNF608Q9ULD9 1512 aaPredicted RBP35.28■■■■□ 3.24
DUX4-204ENST00000569241 ABCA10Q8WWZ4 1543 aa35.27■■■■□ 3.24
DUX4-204ENST00000569241 EIF4G3O43432 1585 aaKnown RBP35.23■■■■□ 3.23
DUX4-204ENST00000569241 ABCA5Q8WWZ7 1642 aa35.18■■■■□ 3.22
DUX4-204ENST00000569241 TDRD9Q8NDG6 1382 aaKnown RBP35.17■■■■□ 3.22
DUX4-204ENST00000569241 AQRO60306 1485 aaKnown RBP eCLIP35.13■■■■□ 3.22
DUX4-204ENST00000569241 RUSC2Q8N2Y8 1516 aa35.12■■■■□ 3.21
DUX4-204ENST00000569241 PBRM1Q86U86 1689 aa35.12■■■■□ 3.21
DUX4-204ENST00000569241 GAPVD1Q14C86 1478 aa35.04■■■■□ 3.2
DUX4-204ENST00000569241 KIF27Q86VH2 1401 aa35.02■■■■□ 3.2
DUX4-204ENST00000569241 FAM9AQ8IZU1 332 aaPredicted RBP34.92■■■■□ 3.18
DUX4-204ENST00000569241 GRIN2BQ13224 1484 aa34.9■■■■□ 3.18
DUX4-204ENST00000569241 ERICH3Q5RHP9 1530 aa34.86■■■■□ 3.17
DUX4-204ENST00000569241 SNAPC4Q5SXM2 1469 aa34.85■■■■□ 3.17
DUX4-204ENST00000569241 ADAMTS12P58397 1594 aa34.79■■■■□ 3.16
DUX4-204ENST00000569241 EEA1Q15075 1411 aa34.79■■■■□ 3.16
DUX4-204ENST00000569241 IGF1RP08069 1367 aa34.78■■■■□ 3.16
DUX4-204ENST00000569241 CUL7Q14999 1698 aa34.77■■■■□ 3.16
DUX4-204ENST00000569241 MAGI1Q96QZ7 1491 aaPredicted RBP34.73■■■■□ 3.15
DUX4-204ENST00000569241 CHD1O14646 1710 aa34.72■■■■□ 3.15
DUX4-204ENST00000569241 CSRNP3Q8WYN3 585 aa34.66■■■■□ 3.14
DUX4-204ENST00000569241 FHAD1B1AJZ9 1412 aa34.61■■■■□ 3.13
DUX4-204ENST00000569241 CARMIL1Q5VZK9 1371 aa34.6■■■■□ 3.13
DUX4-204ENST00000569241 SYNJ2O15056 1496 aa34.6■■■■□ 3.13
DUX4-204ENST00000569241 FBLN2P98095 1184 aa34.59■■■■□ 3.13
DUX4-204ENST00000569241 PRXQ9BXM0 1461 aa34.57■■■■□ 3.12
DUX4-204ENST00000569241 KIF21BO75037 1637 aa34.55■■■■□ 3.12
DUX4-204ENST00000569241 EHMT2Q96KQ7 1210 aa34.53■■■■□ 3.12
DUX4-204ENST00000569241 CHMP7Q8WUX9 453 aaPredicted RBP34.53■■■■□ 3.12
DUX4-204ENST00000569241 GRIN2AQ12879 1464 aa34.51■■■■□ 3.11
DUX4-204ENST00000569241 RAPGEF2Q9Y4G8 1499 aa34.51■■■■□ 3.11
DUX4-204ENST00000569241 CEP170Q5SW79 1584 aa34.4■■■■□ 3.1
DUX4-204ENST00000569241 CTTNBP2Q8WZ74 1663 aa34.35■■■■□ 3.09
DUX4-204ENST00000569241 GOLGA3Q08378 1498 aa34.35■■■■□ 3.09
DUX4-204ENST00000569241 NUP160Q12769 1436 aa34.27■■■■□ 3.08
DUX4-204ENST00000569241 OSCARQ8IYS5 282 aa34.25■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms