RNA–Protein interactions for RNA: ENST00000428192.6

OTUB1-203, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene OTUB1, Length 1,296 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-203ENST00000428192 NISCHQ9Y2I1 1504 aa49.05■■■■■ 5.44
OTUB1-203ENST00000428192 CCDC180Q9P1Z9 1646 aa43.67■■■■■ 4.58
OTUB1-203ENST00000428192 ABCC9O60706 1549 aa43.07■■■■■ 4.48
OTUB1-203ENST00000428192 RB1CC1Q8TDY2 1594 aa41.42■■■■■ 4.22
OTUB1-203ENST00000428192 DCAF8L2P0C7V8 631 aa41.35■■■■■ 4.21
OTUB1-203ENST00000428192 NACADO15069 1562 aa41.33■■■■■ 4.21
OTUB1-203ENST00000428192 MYO15BQ96JP2 1530 aa41.06■■■■■ 4.16
OTUB1-203ENST00000428192 ZCCHC6Q5VYS8 1495 aaKnown RBP40.72■■■■■ 4.11
OTUB1-203ENST00000428192 DCAF1Q9Y4B6 1507 aa40.69■■■■■ 4.1
OTUB1-203ENST00000428192 PABPN1Q86U42 306 aaKnown RBP eCLIP40.28■■■■■ 4.048e-7■■■■□ 25.6
OTUB1-203ENST00000428192 UNC13AQ9UPW8 1703 aa39.96■■■■□ 3.99
OTUB1-203ENST00000428192 BICRAQ9NZM4 1560 aa39.9■■■■□ 3.98
OTUB1-203ENST00000428192 SHROOM4Q9ULL8 1493 aa39.89■■■■□ 3.98
OTUB1-203ENST00000428192 DNAJC5BQ9UF47 199 aa39.82■■■■□ 3.97
OTUB1-203ENST00000428192 SCRIBQ14160 1630 aa39.69■■■■□ 3.94
OTUB1-203ENST00000428192 EIF4G1Q04637 1599 aaKnown RBP39■■■■□ 3.83
OTUB1-203ENST00000428192 CC2D2AQ9P2K1 1620 aa38.89■■■■□ 3.82
OTUB1-203ENST00000428192 CECR2Q9BXF3 1484 aa38.85■■■■□ 3.81
OTUB1-203ENST00000428192 NCAPD3P42695 1498 aa38.18■■■■□ 3.7
OTUB1-203ENST00000428192 BAZ1AQ9NRL2 1556 aaPredicted RBP38.1■■■■□ 3.69
OTUB1-203ENST00000428192 SMARCA2P51531 1590 aa38.06■■■■□ 3.68
OTUB1-203ENST00000428192 ATAD2BQ9ULI0 1458 aa38.03■■■■□ 3.68
OTUB1-203ENST00000428192 SMARCA4P51532 1647 aa38.01■■■■□ 3.67
OTUB1-203ENST00000428192 HMGXB3Q12766 1538 aa37.84■■■■□ 3.65
OTUB1-203ENST00000428192 PEG3Q9GZU2 1588 aa37.75■■■■□ 3.63
OTUB1-203ENST00000428192 BAZ1BQ9UIG0 1483 aaKnown RBP37.74■■■■□ 3.63
OTUB1-203ENST00000428192 MROH2BQ7Z745 1585 aa37.67■■■■□ 3.62
OTUB1-203ENST00000428192 ERCC6Q03468 1493 aa37.33■■■■□ 3.57
OTUB1-203ENST00000428192 RSF1Q96T23 1441 aaPredicted RBP37.26■■■■□ 3.55
OTUB1-203ENST00000428192 LAMC3Q9Y6N6 1575 aa37.14■■■■□ 3.54
OTUB1-203ENST00000428192 WIZO95785 1651 aa37.13■■■■□ 3.53
OTUB1-203ENST00000428192 PDS5BQ9NTI5 1447 aa37.1■■■■□ 3.53
OTUB1-203ENST00000428192 CUX2O14529 1486 aa37.08■■■■□ 3.53
OTUB1-203ENST00000428192 CADPSQ9ULU8 1353 aa37.08■■■■□ 3.53
OTUB1-203ENST00000428192 NESP48681 1621 aa37.06■■■■□ 3.52
OTUB1-203ENST00000428192 TOP2AP11388 1531 aaKnown RBP36.91■■■■□ 3.5
OTUB1-203ENST00000428192 CFTRP13569 1480 aa36.7■■■■□ 3.47
OTUB1-203ENST00000428192 MRC2Q9UBG0 1479 aa36.55■■■■□ 3.44
OTUB1-203ENST00000428192 CEP164Q9UPV0 1460 aa36.55■■■■□ 3.44
OTUB1-203ENST00000428192 FANCD2Q9BXW9 1451 aa36.53■■■■□ 3.44
OTUB1-203ENST00000428192 THOC2Q8NI27 1593 aaKnown RBP36.53■■■■□ 3.44
OTUB1-203ENST00000428192 CCDC88BA6NC98 1476 aa36.51■■■■□ 3.44
OTUB1-203ENST00000428192 KIF21AQ7Z4S6 1674 aa36.48■■■■□ 3.43
OTUB1-203ENST00000428192 DNAJC5Q9H3Z4 198 aa36.43■■■■□ 3.42
OTUB1-203ENST00000428192 WDR62O43379 1518 aa36.34■■■■□ 3.41
OTUB1-203ENST00000428192 SUPT5HO00267 1087 aaKnown RBP36.15■■■■□ 3.38
OTUB1-203ENST00000428192 ABCC8Q09428 1581 aa36.14■■■■□ 3.38
OTUB1-203ENST00000428192 URB2Q14146 1524 aaKnown RBP36.05■■■■□ 3.36
OTUB1-203ENST00000428192 PRDM2Q13029 1718 aa36.04■■■■□ 3.36
OTUB1-203ENST00000428192 IFT140Q96RY7 1462 aa35.86■■■■□ 3.33
OTUB1-203ENST00000428192 TOPBP1Q92547 1522 aa35.85■■■■□ 3.33
OTUB1-203ENST00000428192 DNMBPQ6XZF7 1577 aa35.78■■■■□ 3.32
OTUB1-203ENST00000428192 OSCARQ8IYS5 282 aa35.69■■■■□ 3.3
OTUB1-203ENST00000428192 SOGA1O94964 1423 aa35.54■■■■□ 3.28
OTUB1-203ENST00000428192 POLA1P09884 1462 aaPredicted RBP35.52■■■■□ 3.28
OTUB1-203ENST00000428192 ZNF608Q9ULD9 1512 aaPredicted RBP35.48■■■■□ 3.27
OTUB1-203ENST00000428192 FGD5Q6ZNL6 1462 aa35.37■■■■□ 3.25
OTUB1-203ENST00000428192 TARBP1Q13395 1621 aaKnown RBP35.37■■■■□ 3.25
OTUB1-203ENST00000428192 CUX1P39880 1505 aa35.36■■■■□ 3.25
OTUB1-203ENST00000428192 AQRO60306 1485 aaKnown RBP eCLIP35.35■■■■□ 3.253e-10■■■■■ 44.3
OTUB1-203ENST00000428192 WDR97A6NE52 1622 aa35.32■■■■□ 3.25
OTUB1-203ENST00000428192 RAD54L2Q9Y4B4 1467 aa35.31■■■■□ 3.24
OTUB1-203ENST00000428192 TDRD9Q8NDG6 1382 aaKnown RBP35.29■■■■□ 3.24
OTUB1-203ENST00000428192 EIF4G3O43432 1585 aaKnown RBP35.27■■■■□ 3.24
OTUB1-203ENST00000428192 WRNQ14191 1432 aaPredicted RBP eCLIP35.23■■■■□ 3.23
OTUB1-203ENST00000428192 FBLN2P98095 1184 aa35.2■■■■□ 3.23
OTUB1-203ENST00000428192 GRIN2BQ13224 1484 aa35.15■■■■□ 3.22
OTUB1-203ENST00000428192 CHMP7Q8WUX9 453 aaPredicted RBP35.14■■■■□ 3.22
OTUB1-203ENST00000428192 ABCA10Q8WWZ4 1543 aa35.1■■■■□ 3.21
OTUB1-203ENST00000428192 MAGI1Q96QZ7 1491 aaPredicted RBP35.08■■■■□ 3.21
OTUB1-203ENST00000428192 GAPVD1Q14C86 1478 aa35.06■■■■□ 3.2
OTUB1-203ENST00000428192 TOP2BQ02880 1626 aa35.03■■■■□ 3.2
OTUB1-203ENST00000428192 SNAPC4Q5SXM2 1469 aa34.97■■■■□ 3.19
OTUB1-203ENST00000428192 TRIM41Q8WV44 630 aa34.97■■■■□ 3.19
OTUB1-203ENST00000428192 BIVM-ERCC5R4GMW8 1640 aa34.94■■■■□ 3.18
OTUB1-203ENST00000428192 SYNJ2O15056 1496 aa34.93■■■■□ 3.18
OTUB1-203ENST00000428192 SYNJ1O43426 1573 aa34.85■■■■□ 3.17
OTUB1-203ENST00000428192 ABCA5Q8WWZ7 1642 aa34.79■■■■□ 3.16
OTUB1-203ENST00000428192 CHD1O14646 1710 aa34.78■■■■□ 3.16
OTUB1-203ENST00000428192 ARHGEF11O15085 1522 aa34.75■■■■□ 3.15
OTUB1-203ENST00000428192 FHAD1B1AJZ9 1412 aa34.72■■■■□ 3.15
OTUB1-203ENST00000428192 ERICH3Q5RHP9 1530 aa34.71■■■■□ 3.15
OTUB1-203ENST00000428192 PBRM1Q86U86 1689 aa34.67■■■■□ 3.14
OTUB1-203ENST00000428192 RIMBP3CA6NJZ7 1639 aa34.66■■■■□ 3.14
OTUB1-203ENST00000428192 RIMBP3BA6NNM3 1639 aa34.66■■■■□ 3.14
OTUB1-203ENST00000428192 RIMBP3Q9UFD9 1639 aa34.66■■■■□ 3.14
OTUB1-203ENST00000428192 CYB5RLQ6IPT4 315 aa34.66■■■■□ 3.14
OTUB1-203ENST00000428192 KIF27Q86VH2 1401 aa34.61■■■■□ 3.13
OTUB1-203ENST00000428192 GRIN2AQ12879 1464 aa34.59■■■■□ 3.13
OTUB1-203ENST00000428192 CLASP1Q7Z460 1538 aa34.57■■■■□ 3.12
OTUB1-203ENST00000428192 ADAMTS12P58397 1594 aa34.49■■■■□ 3.11
OTUB1-203ENST00000428192 NUP160Q12769 1436 aa34.47■■■■□ 3.11
OTUB1-203ENST00000428192 IGF1RP08069 1367 aa34.45■■■■□ 3.11
OTUB1-203ENST00000428192 ARAP1Q96P48 1450 aa34.39■■■■□ 3.1
OTUB1-203ENST00000428192 JPH4Q96JJ6 628 aa34.32■■■■□ 3.08
OTUB1-203ENST00000428192 CARMIL1Q5VZK9 1371 aa34.28■■■■□ 3.08
OTUB1-203ENST00000428192 CEP170Q5SW79 1584 aa34.25■■■■□ 3.07
OTUB1-203ENST00000428192 CUL7Q14999 1698 aa34.23■■■■□ 3.07
OTUB1-203ENST00000428192 KIAA0586Q9BVV6 1533 aa34.16■■■■□ 3.06
OTUB1-203ENST00000428192 TRHP20396 242 aaPredicted RBP34.15■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 178.6 ms