RNA–Protein interactions for RNA: ENST00000451657.5

NME6-213, Transcript of NME/NM23 nucleoside diphosphate kinase 6, humanhuman

TSL 2 BASIC

Gene NME6, Length 871 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME6-213ENST00000451657 NISCHQ9Y2I1 1504 aa49.43■■■■■ 5.5
NME6-213ENST00000451657 CCDC180Q9P1Z9 1646 aa43.95■■■■■ 4.63
NME6-213ENST00000451657 ABCC9O60706 1549 aa43.12■■■■■ 4.49
NME6-213ENST00000451657 RB1CC1Q8TDY2 1594 aa41.42■■■■■ 4.22
NME6-213ENST00000451657 DCAF8L2P0C7V8 631 aa41.38■■■■■ 4.21
NME6-213ENST00000451657 NACADO15069 1562 aa41.37■■■■■ 4.21
NME6-213ENST00000451657 ZCCHC6Q5VYS8 1495 aaKnown RBP41.15■■■■■ 4.18
NME6-213ENST00000451657 MYO15BQ96JP2 1530 aa41.09■■■■■ 4.17
NME6-213ENST00000451657 DCAF1Q9Y4B6 1507 aa40.88■■■■■ 4.14
NME6-213ENST00000451657 UNC13AQ9UPW8 1703 aa40.44■■■■■ 4.06
NME6-213ENST00000451657 PABPN1Q86U42 306 aaKnown RBP eCLIP40.3■■■■■ 4.04
NME6-213ENST00000451657 BICRAQ9NZM4 1560 aa40.18■■■■■ 4.02
NME6-213ENST00000451657 SCRIBQ14160 1630 aa40.1■■■■■ 4.01
NME6-213ENST00000451657 SHROOM4Q9ULL8 1493 aa39.75■■■■□ 3.95
NME6-213ENST00000451657 DNAJC5BQ9UF47 199 aa39.68■■■■□ 3.94
NME6-213ENST00000451657 EIF4G1Q04637 1599 aaKnown RBP39.12■■■■□ 3.85
NME6-213ENST00000451657 CC2D2AQ9P2K1 1620 aa38.99■■■■□ 3.83
NME6-213ENST00000451657 CECR2Q9BXF3 1484 aa38.75■■■■□ 3.79
NME6-213ENST00000451657 SMARCA4P51532 1647 aa38.36■■■■□ 3.73
NME6-213ENST00000451657 BAZ1AQ9NRL2 1556 aaPredicted RBP38.31■■■■□ 3.72
NME6-213ENST00000451657 NCAPD3P42695 1498 aa38.19■■■■□ 3.7
NME6-213ENST00000451657 ATAD2BQ9ULI0 1458 aa38.19■■■■□ 3.7
NME6-213ENST00000451657 SMARCA2P51531 1590 aa38.13■■■■□ 3.69
NME6-213ENST00000451657 MROH2BQ7Z745 1585 aa38.1■■■■□ 3.69
NME6-213ENST00000451657 PEG3Q9GZU2 1588 aa37.98■■■■□ 3.67
NME6-213ENST00000451657 HMGXB3Q12766 1538 aa37.97■■■■□ 3.67
NME6-213ENST00000451657 BAZ1BQ9UIG0 1483 aaKnown RBP37.86■■■■□ 3.65
NME6-213ENST00000451657 WIZO95785 1651 aa37.66■■■■□ 3.62
NME6-213ENST00000451657 RSF1Q96T23 1441 aaPredicted RBP37.64■■■■□ 3.62
NME6-213ENST00000451657 NESP48681 1621 aa37.28■■■■□ 3.56
NME6-213ENST00000451657 TOP2AP11388 1531 aaKnown RBP37.26■■■■□ 3.56
NME6-213ENST00000451657 LAMC3Q9Y6N6 1575 aa37.17■■■■□ 3.54
NME6-213ENST00000451657 ERCC6Q03468 1493 aa37.17■■■■□ 3.54
NME6-213ENST00000451657 CADPSQ9ULU8 1353 aa37.08■■■■□ 3.53
NME6-213ENST00000451657 PDS5BQ9NTI5 1447 aa36.95■■■■□ 3.51
NME6-213ENST00000451657 CCDC88BA6NC98 1476 aa36.85■■■■□ 3.49
NME6-213ENST00000451657 CFTRP13569 1480 aa36.83■■■■□ 3.49
NME6-213ENST00000451657 CUX2O14529 1486 aa36.81■■■■□ 3.48
NME6-213ENST00000451657 KIF21AQ7Z4S6 1674 aa36.8■■■■□ 3.48
NME6-213ENST00000451657 THOC2Q8NI27 1593 aaKnown RBP36.71■■■■□ 3.47
NME6-213ENST00000451657 SUPT5HO00267 1087 aaKnown RBP36.64■■■■□ 3.46
NME6-213ENST00000451657 FANCD2Q9BXW9 1451 aa36.63■■■■□ 3.45
NME6-213ENST00000451657 CEP164Q9UPV0 1460 aa36.59■■■■□ 3.45
NME6-213ENST00000451657 MRC2Q9UBG0 1479 aa36.56■■■■□ 3.44
NME6-213ENST00000451657 PRDM2Q13029 1718 aa36.48■■■■□ 3.43
NME6-213ENST00000451657 WDR62O43379 1518 aa36.44■■■■□ 3.42
NME6-213ENST00000451657 URB2Q14146 1524 aaKnown RBP36.27■■■■□ 3.4
NME6-213ENST00000451657 ABCC8Q09428 1581 aa36.04■■■■□ 3.36
NME6-213ENST00000451657 TOPBP1Q92547 1522 aa36.03■■■■□ 3.36
NME6-213ENST00000451657 DNMBPQ6XZF7 1577 aa35.98■■■■□ 3.35
NME6-213ENST00000451657 IFT140Q96RY7 1462 aa35.84■■■■□ 3.33
NME6-213ENST00000451657 DNAJC5Q9H3Z4 198 aa35.8■■■■□ 3.32
NME6-213ENST00000451657 CUX1P39880 1505 aa35.73■■■■□ 3.31
NME6-213ENST00000451657 POLA1P09884 1462 aaPredicted RBP35.73■■■■□ 3.31
NME6-213ENST00000451657 ZNF608Q9ULD9 1512 aaPredicted RBP35.68■■■■□ 3.3
NME6-213ENST00000451657 TARBP1Q13395 1621 aaKnown RBP35.64■■■■□ 3.3
NME6-213ENST00000451657 FGD5Q6ZNL6 1462 aa35.63■■■■□ 3.29
NME6-213ENST00000451657 SOGA1O94964 1423 aa35.6■■■■□ 3.29
NME6-213ENST00000451657 RAD54L2Q9Y4B4 1467 aa35.59■■■■□ 3.29
NME6-213ENST00000451657 EIF4G3O43432 1585 aaKnown RBP35.51■■■■□ 3.28
NME6-213ENST00000451657 WRNQ14191 1432 aaPredicted RBP eCLIP35.49■■■■□ 3.27
NME6-213ENST00000451657 AQRO60306 1485 aaKnown RBP eCLIP35.48■■■■□ 3.272e-6■■■□□ 18.3
NME6-213ENST00000451657 TDRD9Q8NDG6 1382 aaKnown RBP35.41■■■■□ 3.26
NME6-213ENST00000451657 TOP2BQ02880 1626 aa35.4■■■■□ 3.26
NME6-213ENST00000451657 BIVM-ERCC5R4GMW8 1640 aa35.39■■■■□ 3.26
NME6-213ENST00000451657 SYNJ1O43426 1573 aa35.38■■■■□ 3.25
NME6-213ENST00000451657 WDR97A6NE52 1622 aa35.35■■■■□ 3.25
NME6-213ENST00000451657 OSCARQ8IYS5 282 aa35.31■■■■□ 3.24
NME6-213ENST00000451657 ABCA10Q8WWZ4 1543 aa35.28■■■■□ 3.24
NME6-213ENST00000451657 GRIN2BQ13224 1484 aa35.18■■■■□ 3.22
NME6-213ENST00000451657 GAPVD1Q14C86 1478 aa35.18■■■■□ 3.22
NME6-213ENST00000451657 SNAPC4Q5SXM2 1469 aa35.15■■■■□ 3.22
NME6-213ENST00000451657 ABCA5Q8WWZ7 1642 aa35.13■■■■□ 3.21
NME6-213ENST00000451657 MAGI1Q96QZ7 1491 aaPredicted RBP35.09■■■■□ 3.21
NME6-213ENST00000451657 FBLN2P98095 1184 aa35.09■■■■□ 3.21
NME6-213ENST00000451657 CHD1O14646 1710 aa35.06■■■■□ 3.2
NME6-213ENST00000451657 PBRM1Q86U86 1689 aa35.06■■■■□ 3.2
NME6-213ENST00000451657 CHMP7Q8WUX9 453 aaPredicted RBP34.99■■■■□ 3.19
NME6-213ENST00000451657 SYNJ2O15056 1496 aa34.96■■■■□ 3.19
NME6-213ENST00000451657 ERICH3Q5RHP9 1530 aa34.86■■■■□ 3.17
NME6-213ENST00000451657 ADAMTS12P58397 1594 aa34.8■■■■□ 3.16
NME6-213ENST00000451657 FHAD1B1AJZ9 1412 aa34.77■■■■□ 3.16
NME6-213ENST00000451657 KIF27Q86VH2 1401 aa34.75■■■■□ 3.15
NME6-213ENST00000451657 GRIN2AQ12879 1464 aa34.72■■■■□ 3.15
NME6-213ENST00000451657 CLASP1Q7Z460 1538 aa34.71■■■■□ 3.15
NME6-213ENST00000451657 RIMBP3CA6NJZ7 1639 aa34.7■■■■□ 3.14
NME6-213ENST00000451657 RIMBP3BA6NNM3 1639 aa34.7■■■■□ 3.14
NME6-213ENST00000451657 RIMBP3Q9UFD9 1639 aa34.7■■■■□ 3.14
NME6-213ENST00000451657 ARHGEF11O15085 1522 aa34.69■■■■□ 3.14
NME6-213ENST00000451657 IGF1RP08069 1367 aa34.64■■■■□ 3.14
NME6-213ENST00000451657 TRIM41Q8WV44 630 aa34.62■■■■□ 3.13
NME6-213ENST00000451657 NUP160Q12769 1436 aa34.58■■■■□ 3.13
NME6-213ENST00000451657 CEP170Q5SW79 1584 aa34.54■■■■□ 3.12
NME6-213ENST00000451657 CUL7Q14999 1698 aa34.5■■■■□ 3.11
NME6-213ENST00000451657 CARMIL1Q5VZK9 1371 aa34.43■■■■□ 3.1
NME6-213ENST00000451657 RUSC2Q8N2Y8 1516 aa34.41■■■■□ 3.1
NME6-213ENST00000451657 ARAP1Q96P48 1450 aa34.41■■■■□ 3.1
NME6-213ENST00000451657 CYB5RLQ6IPT4 315 aa34.41■■■■□ 3.1
NME6-213ENST00000451657 SHROOM2Q13796 1616 aa34.3■■■■□ 3.08
NME6-213ENST00000451657 JPH4Q96JJ6 628 aa34.25■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 196.6 ms