Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 SRO7YPR032W 3102 nt3.68□□□□□ -1.82
RPN11P43588 RRP5YMR229C 5190 nt3.67□□□□□ -1.82
RPN11P43588 VPS45YGL095C 1734 nt3.67□□□□□ -1.82
RPN11P43588 WHI3YNL197C 1986 nt3.67□□□□□ -1.82
RPN11P43588 CHO2YGR157W 2610 nt3.67□□□□□ -1.82
RPN11P43588 YOR022CYOR022C 2148 nt3.67□□□□□ -1.82
RPN11P43588 RRN11YML043C 1524 nt3.67□□□□□ -1.82
RPN11P43588 RSM24YDR175C 960 nt3.67□□□□□ -1.82
RPN11P43588 ATC1YDR184C 885 nt3.67□□□□□ -1.82
RPN11P43588 ATP5YDR298C 639 nt3.67□□□□□ -1.82
RPN11P43588 YFL012W-AYFL012W-A 375 nt3.67□□□□□ -1.82
RPN11P43588 SSO2YMR183C 888 nt3.67□□□□□ -1.82
RPN11P43588 PEX15YOL044W 1152 nt3.67□□□□□ -1.82
RPN11P43588 IDH2YOR136W 1110 nt3.67□□□□□ -1.82
RPN11P43588 CDC14YFR028C 1656 nt3.67□□□□□ -1.82
RPN11P43588 DAP2YHR028C 2457 nt3.67□□□□□ -1.82
RPN11P43588 PGS1YCL004W 1566 nt3.67□□□□□ -1.82
RPN11P43588 PKP2YGL059W 1476 nt3.67□□□□□ -1.82
RPN11P43588 SNT1YCR033W 3681 nt3.66□□□□□ -1.82
RPN11P43588 MAM1YER106W 909 nt3.66□□□□□ -1.82
RPN11P43588 CAP1YKL007W 807 nt3.66□□□□□ -1.82
RPN11P43588 YPT6YLR262C 648 nt3.66□□□□□ -1.82
RPN11P43588 RFC5YBR087W 1065 nt3.66□□□□□ -1.82
RPN11P43588 PCI8YIL071C 1335 nt3.66□□□□□ -1.82
RPN11P43588 VPS38YLR360W 1320 nt3.66□□□□□ -1.82
RPN11P43588 YDL180WYDL180W 1644 nt3.66□□□□□ -1.82
RPN11P43588 HOS3YPL116W 2094 nt3.66□□□□□ -1.82
RPN11P43588 HEH2YDR458C 1992 nt3.65□□□□□ -1.82
RPN11P43588 TFB2YPL122C 1542 nt3.65□□□□□ -1.82
RPN11P43588 STE11YLR362W 2154 nt3.65□□□□□ -1.82
RPN11P43588 MNL1YHR204W 2391 nt3.65□□□□□ -1.83
RPN11P43588 UBC13YDR092W 462 nt3.65□□□□□ -1.83
RPN11P43588 YPR136CYPR136C 513 nt3.65□□□□□ -1.83
RPN11P43588 FAS1YKL182W 6156 nt3.65□□□□□ -1.83
RPN11P43588 OSH3YHR073W 2991 nt3.64□□□□□ -1.83
RPN11P43588 RPS29BYDL061C 171 nt3.64□□□□□ -1.83
RPN11P43588 RMD6YEL072W 696 nt3.64□□□□□ -1.83
RPN11P43588 ERP6YGL002W 651 nt3.64□□□□□ -1.83
RPN11P43588 MRPL9YGR220C 810 nt3.64□□□□□ -1.83
RPN11P43588 RGI2YIL057C 495 nt3.64□□□□□ -1.83
RPN11P43588 VID28YIL017C 2766 nt3.64□□□□□ -1.83
RPN11P43588 YDR186CYDR186C 2634 nt3.64□□□□□ -1.83
RPN11P43588 MSM1YGR171C 1728 nt3.64□□□□□ -1.83
RPN11P43588 YSH1YLR277C 2340 nt3.64□□□□□ -1.83
RPN11P43588 IMH1YLR309C 2736 nt3.64□□□□□ -1.83
RPN11P43588 STE24YJR117W 1362 nt3.63□□□□□ -1.83
RPN11P43588 UBP1YDL122W 2430 nt3.63□□□□□ -1.83
RPN11P43588 TCO89YPL180W 2400 nt3.63□□□□□ -1.83
RPN11P43588 RRP42YDL111C 798 nt3.63□□□□□ -1.83
RPN11P43588 LRS4YDR439W 1044 nt3.63□□□□□ -1.83
RPN11P43588 PGD1YGL025C 1194 nt3.63□□□□□ -1.83
RPN11P43588 MIG2YGL209W 1149 nt3.63□□□□□ -1.83
RPN11P43588 YGR226CYGR226C 210 nt3.63□□□□□ -1.83
RPN11P43588 EPT1YHR123W 1176 nt3.63□□□□□ -1.83
RPN11P43588 RNR2YJL026W 1200 nt3.63□□□□□ -1.83
RPN11P43588 YPT52YKR014C 705 nt3.63□□□□□ -1.83
RPN11P43588 SRP40YKR092C 1221 nt3.63□□□□□ -1.83
RPN11P43588 YNL013CYNL013C 378 nt3.63□□□□□ -1.83
RPN11P43588 MIC27YNL100W 705 nt3.63□□□□□ -1.83
RPN11P43588 DIB1YPR082C 432 nt3.63□□□□□ -1.83
RPN11P43588 GPI10YGL142C 1851 nt3.62□□□□□ -1.83
RPN11P43588 PRM15YMR278W 1869 nt3.62□□□□□ -1.83
RPN11P43588 YLR152CYLR152C 1731 nt3.62□□□□□ -1.83
RPN11P43588 YDR248CYDR248C 582 nt3.62□□□□□ -1.83
RPN11P43588 YPL135C-AYPL135C-A 174 nt3.62□□□□□ -1.83
RPN11P43588 LOA1YPR139C 903 nt3.62□□□□□ -1.83
RPN11P43588 YBR103C-AYBR103C-A 144 nt3.62□□□□□ -1.83
RPN11P43588 SPT6YGR116W 4356 nt3.62□□□□□ -1.83
RPN11P43588 DAN4YJR151C 3486 nt3.62□□□□□ -1.83
RPN11P43588 UBP8YMR223W 1416 nt3.61□□□□□ -1.83
RPN11P43588 NGG1YDR176W 2109 nt3.61□□□□□ -1.83
RPN11P43588 TVP15YDR100W 432 nt3.61□□□□□ -1.83
RPN11P43588 HMO1YDR174W 741 nt3.61□□□□□ -1.83
RPN11P43588 REH1YLR387C 1299 nt3.61□□□□□ -1.83
RPN11P43588 YPL068CYPL068C 882 nt3.61□□□□□ -1.83
RPN11P43588 POL30YBR088C 777 nt3.61□□□□□ -1.83
RPN11P43588 CPA2YJR109C 3357 nt3.6□□□□□ -1.83
RPN11P43588 ISM1YPL040C 3009 nt3.6□□□□□ -1.83
RPN11P43588 XRN1YGL173C 4587 nt3.6□□□□□ -1.83
RPN11P43588 YDR340WYDR340W 303 nt3.6□□□□□ -1.83
RPN11P43588 PRP38YGR075C 729 nt3.6□□□□□ -1.83
RPN11P43588 EFG1YGR271C-A 702 nt3.6□□□□□ -1.83
RPN11P43588 EMC2YJR088C 879 nt3.6□□□□□ -1.83
RPN11P43588 RDN58-1RDN58-1 158 nt3.6□□□□□ -1.83
RPN11P43588 RDN58-2RDN58-2 158 nt3.6□□□□□ -1.83
RPN11P43588 VPS20YMR077C 666 nt3.6□□□□□ -1.83
RPN11P43588 HUB1YNR032C-A 222 nt3.6□□□□□ -1.83
RPN11P43588 YPR147CYPR147C 915 nt3.6□□□□□ -1.83
RPN11P43588 POP7YBR167C 423 nt3.6□□□□□ -1.83
RPN11P43588 RIB5YBR256C 717 nt3.6□□□□□ -1.83
RPN11P43588 HUL5YGL141W 2733 nt3.6□□□□□ -1.83
RPN11P43588 YJL049WYJL049W 1353 nt3.6□□□□□ -1.83
RPN11P43588 MYO5YMR109W 3660 nt3.6□□□□□ -1.83
RPN11P43588 PIG2YIL045W 1617 nt3.59□□□□□ -1.83
RPN11P43588 YPR022CYPR022C 3402 nt3.59□□□□□ -1.83
RPN11P43588 AUS1YOR011W 4185 nt3.59□□□□□ -1.83
RPN11P43588 SEC4YFL005W 648 nt3.59□□□□□ -1.83
RPN11P43588 DGK1YOR311C 873 nt3.59□□□□□ -1.83
RPN11P43588 RRP15YPR143W 753 nt3.59□□□□□ -1.83
RPN11P43588 YCL007CYCL007C 393 nt3.59□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 73.3 ms