RNA–Protein interactions for RNA: YIL071C

PCI8, Transcript of Possible shared subunit of Cop9 signalosome (CSN) and eIF3, yeastyeast

Gene PCI8, Length 1,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCI8YIL071C MTC1P47018 478 aaKnown RBP17.72■□□□□ 0.43
PCI8YIL071C FAP1P53971 965 aa16.8■□□□□ 0.28
PCI8YIL071C DRS1P32892 752 aaKnown RBP15.89■□□□□ 0.13
PCI8YIL071C PRY3P47033 881 aa15.77■□□□□ 0.12
PCI8YIL071C AAD16Q02895 342 aa15.33■□□□□ 0.04
PCI8YIL071C PRI1P10363 409 aa15.31■□□□□ 0.04
PCI8YIL071C ISW2Q08773 1120 aa14.91□□□□□ -0.02
PCI8YIL071C HAA1Q12753 694 aaKnown RBP14.78□□□□□ -0.04
PCI8YIL071C YCK3P39962 524 aa14.71□□□□□ -0.05
PCI8YIL071C RPG1P38249 964 aaKnown RBP14.7□□□□□ -0.06
PCI8YIL071C TSR3Q12094 313 aaKnown RBP14.42□□□□□ -0.1
PCI8YIL071C DIP2Q12220 943 aaPredicted RBP14.15□□□□□ -0.14
PCI8YIL071C MRPL32P25348 183 aa13.93□□□□□ -0.18
PCI8YIL071C RSE1Q04693 1361 aaKnown RBP13.91□□□□□ -0.18
PCI8YIL071C REB1P21538 810 aa13.56□□□□□ -0.24
PCI8YIL071C YGL015CP33199 130 aa13.56□□□□□ -0.24
PCI8YIL071C RPL17AP05740 184 aaKnown RBP13.49□□□□□ -0.25
PCI8YIL071C RPL17BP46990 184 aaKnown RBP13.49□□□□□ -0.25
PCI8YIL071C AVT3P36062 692 aa13.41□□□□□ -0.26
PCI8YIL071C CDC27P38042 758 aa13.01□□□□□ -0.33
PCI8YIL071C BFR2Q06631 534 aaKnown RBP12.88□□□□□ -0.35
PCI8YIL071C YKR023WP36119 530 aaKnown RBP12.82□□□□□ -0.36
PCI8YIL071C UBP10P53874 792 aaPredicted RBP12.82□□□□□ -0.36
PCI8YIL071C SPT21P35209 758 aa12.8□□□□□ -0.36
PCI8YIL071C MAP2P38174 421 aaKnown RBP12.72□□□□□ -0.37
PCI8YIL071C BUD31P25337 157 aaPredicted RBP12.68□□□□□ -0.38
PCI8YIL071C HOP09932 586 aa12.59□□□□□ -0.39
PCI8YIL071C TFC8Q12308 588 aa12.59□□□□□ -0.39
PCI8YIL071C DCD1P06773 312 aa12.53□□□□□ -0.4
PCI8YIL071C SCY1P53009 804 aa12.37□□□□□ -0.43
PCI8YIL071C TIF4632P39936 914 aaKnown RBP12.36□□□□□ -0.43
PCI8YIL071C SLX5P32828 619 aaKnown RBP12.29□□□□□ -0.44
PCI8YIL071C TGL3P40308 642 aa12.25□□□□□ -0.45
PCI8YIL071C RIM101P33400 625 aa12.22□□□□□ -0.45
PCI8YIL071C UBP9P39967 754 aa12.15□□□□□ -0.46
PCI8YIL071C BCH2P36122 765 aa12.13□□□□□ -0.47
PCI8YIL071C SIS1P25294 352 aaKnown RBP12.08□□□□□ -0.48
PCI8YIL071C EPS1P40557 701 aa11.81□□□□□ -0.52
PCI8YIL071C BDF1P35817 686 aa11.77□□□□□ -0.53
PCI8YIL071C OXP1P28273 1286 aa11.75□□□□□ -0.53
PCI8YIL071C PTP3P40048 928 aa11.72□□□□□ -0.53
PCI8YIL071C YIL055CP40523 627 aaKnown RBP11.71□□□□□ -0.53
PCI8YIL071C MST1P07236 462 aa11.61□□□□□ -0.55
PCI8YIL071C YOR238WQ08634 303 aa11.6□□□□□ -0.55
PCI8YIL071C YBL029C-AQ3E756 94 aa11.57□□□□□ -0.56
PCI8YIL071C BBC1P47068 1157 aa11.56□□□□□ -0.56
PCI8YIL071C NSR1P27476 414 aaKnown RBP RIP-Chip data11.51□□□□□ -0.57not detected
PCI8YIL071C RSM7P47150 247 aa11.48□□□□□ -0.57
PCI8YIL071C YAP5P40574 245 aa11.44□□□□□ -0.58
PCI8YIL071C AI2P03876 854 aa11.43□□□□□ -0.58
PCI8YIL071C VNX1P42839 908 aa11.4□□□□□ -0.58
PCI8YIL071C YAH1Q12184 172 aaKnown RBP11.38□□□□□ -0.59
PCI8YIL071C SPP1Q03012 353 aa11.35□□□□□ -0.59
PCI8YIL071C WSC3Q12215 556 aa11.31□□□□□ -0.6
PCI8YIL071C GTT3P39996 337 aa11.25□□□□□ -0.61
PCI8YIL071C TFA1P36100 482 aa11.18□□□□□ -0.62
PCI8YIL071C TIF11P38912 153 aaKnown RBP11.18□□□□□ -0.62
PCI8YIL071C YJL171CP46992 396 aa11.15□□□□□ -0.62
PCI8YIL071C YLR271WQ06152 274 aa11.11□□□□□ -0.63
PCI8YIL071C AIR2Q12476 344 aaKnown RBP11.1□□□□□ -0.63
PCI8YIL071C FKH1P40466 484 aa11.09□□□□□ -0.63
PCI8YIL071C PSD2P53037 1138 aaKnown RBP11.04□□□□□ -0.64
PCI8YIL071C PIB1Q06651 286 aa11.03□□□□□ -0.64
PCI8YIL071C LDB19Q12502 818 aa11.02□□□□□ -0.65
PCI8YIL071C ULI1P43604 169 aa11.01□□□□□ -0.65
PCI8YIL071C MRM1P25270 412 aa10.99□□□□□ -0.65
PCI8YIL071C IOC2Q12072 812 aa10.93□□□□□ -0.66
PCI8YIL071C BMT6Q12291 365 aa10.92□□□□□ -0.66
PCI8YIL071C MSB4Q12317 492 aa10.92□□□□□ -0.66
PCI8YIL071C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.92□□□□□ -0.66not detected
PCI8YIL071C EAP1P36041 632 aaKnown RBP10.9□□□□□ -0.66
PCI8YIL071C SSP1P38871 571 aa10.84□□□□□ -0.67
PCI8YIL071C YMR1P47147 688 aaKnown RBP RIP-Chip data10.81□□□□□ -0.68not detected
PCI8YIL071C SET4P42948 560 aa10.79□□□□□ -0.68
PCI8YIL071C YOL036WQ08206 761 aa10.79□□□□□ -0.68
PCI8YIL071C RTG1P32607 177 aa10.76□□□□□ -0.69
PCI8YIL071C DBP1P24784 617 aaKnown RBP10.75□□□□□ -0.69
PCI8YIL071C TRP5P00931 707 aaKnown RBP10.74□□□□□ -0.69
PCI8YIL071C RTG3P38165 486 aa10.73□□□□□ -0.69
PCI8YIL071C NCR1Q12200 1170 aa10.71□□□□□ -0.69
PCI8YIL071C VPS29P38759 282 aa10.7□□□□□ -0.7
PCI8YIL071C YFR006WP43590 535 aa10.69□□□□□ -0.7
PCI8YIL071C MGA2P40578 1113 aa10.68□□□□□ -0.7
PCI8YIL071C YNL035CP53962 389 aaKnown RBP10.68□□□□□ -0.7
PCI8YIL071C CST9Q06032 482 aa10.68□□□□□ -0.7
PCI8YIL071C VMA1P17255 1071 aaKnown RBP10.67□□□□□ -0.7
PCI8YIL071C SEC61P32915 480 aa10.66□□□□□ -0.7
PCI8YIL071C STS1P38637 319 aa10.62□□□□□ -0.71
PCI8YIL071C TFG1P41895 735 aaPredicted RBP10.61□□□□□ -0.71
PCI8YIL071C SAM3Q08986 587 aa10.61□□□□□ -0.71
PCI8YIL071C ABP1P15891 592 aaKnown RBP10.53□□□□□ -0.72
PCI8YIL071C JIP4Q03361 876 aa10.51□□□□□ -0.73
PCI8YIL071C RCR1P38212 213 aa10.49□□□□□ -0.73
PCI8YIL071C GYP5Q12344 894 aa10.48□□□□□ -0.73
PCI8YIL071C SAP30P38429 201 aa10.46□□□□□ -0.73
PCI8YIL071C DAN4P47179 1161 aa10.45□□□□□ -0.74
PCI8YIL071C HTA1P04911 132 aaKnown RBP10.44□□□□□ -0.74
PCI8YIL071C HTA2P04912 132 aa10.44□□□□□ -0.74
PCI8YIL071C YDL129WQ07555 291 aa10.41□□□□□ -0.74
PCI8YIL071C DCW1P36091 449 aa10.39□□□□□ -0.75
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms