RNA–Protein interactions for RNA: YBR087W

RFC5, Transcript of Subunit of heteropentameric Replication factor C (RF-C), yeastyeast

Gene RFC5, Length 1,065 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFC5YBR087W MTC1P47018 478 aaKnown RBP13.75□□□□□ -0.21
RFC5YBR087W FAP1P53971 965 aa12.67□□□□□ -0.38
RFC5YBR087W DRS1P32892 752 aaKnown RBP12.57□□□□□ -0.4
RFC5YBR087W PRY3P47033 881 aa11.91□□□□□ -0.5
RFC5YBR087W PRI1P10363 409 aa11.73□□□□□ -0.53
RFC5YBR087W AAD16Q02895 342 aa11.69□□□□□ -0.54
RFC5YBR087W ISW2Q08773 1120 aa11.45□□□□□ -0.58
RFC5YBR087W RPG1P38249 964 aaKnown RBP11.34□□□□□ -0.59
RFC5YBR087W YCK3P39962 524 aa11.24□□□□□ -0.61
RFC5YBR087W HAA1Q12753 694 aaKnown RBP11.15□□□□□ -0.62
RFC5YBR087W DIP2Q12220 943 aaPredicted RBP11.11□□□□□ -0.63
RFC5YBR087W TSR3Q12094 313 aaKnown RBP11.08□□□□□ -0.64
RFC5YBR087W RSE1Q04693 1361 aaKnown RBP10.82□□□□□ -0.68
RFC5YBR087W MRPL32P25348 183 aa10.64□□□□□ -0.71
RFC5YBR087W AVT3P36062 692 aa10.64□□□□□ -0.71
RFC5YBR087W RPL17AP05740 184 aaKnown RBP10.5□□□□□ -0.73
RFC5YBR087W RPL17BP46990 184 aaKnown RBP10.5□□□□□ -0.73
RFC5YBR087W REB1P21538 810 aa10.48□□□□□ -0.73
RFC5YBR087W BFR2Q06631 534 aaKnown RBP10.33□□□□□ -0.76
RFC5YBR087W YGL015CP33199 130 aa10.27□□□□□ -0.77
RFC5YBR087W CDC27P38042 758 aa10.07□□□□□ -0.8
RFC5YBR087W SPT21P35209 758 aa10.03□□□□□ -0.8
RFC5YBR087W YKR023WP36119 530 aaKnown RBP9.98□□□□□ -0.81
RFC5YBR087W UBP10P53874 792 aaPredicted RBP9.82□□□□□ -0.84
RFC5YBR087W MAP2P38174 421 aaKnown RBP9.79□□□□□ -0.84
RFC5YBR087W HOP09932 586 aa9.77□□□□□ -0.85
RFC5YBR087W TFC8Q12308 588 aa9.77□□□□□ -0.85
RFC5YBR087W DCD1P06773 312 aa9.74□□□□□ -0.85
RFC5YBR087W RIM101P33400 625 aa9.62□□□□□ -0.87
RFC5YBR087W TFA1P36100 482 aa9.57□□□□□ -0.88
RFC5YBR087W BUD31P25337 157 aaPredicted RBP9.54□□□□□ -0.88
RFC5YBR087W SCY1P53009 804 aa9.54□□□□□ -0.88
RFC5YBR087W SLX5P32828 619 aaKnown RBP9.44□□□□□ -0.9
RFC5YBR087W BCH2P36122 765 aa9.44□□□□□ -0.9
RFC5YBR087W TIF4632P39936 914 aaKnown RBP9.41□□□□□ -0.9
RFC5YBR087W TGL3P40308 642 aa9.37□□□□□ -0.91
RFC5YBR087W OXP1P28273 1286 aa9.28□□□□□ -0.92
RFC5YBR087W EPS1P40557 701 aa9.2□□□□□ -0.94
RFC5YBR087W BDF1P35817 686 aa9.16□□□□□ -0.94
RFC5YBR087W UBP9P39967 754 aa9.16□□□□□ -0.94
RFC5YBR087W PTP3P40048 928 aa9.16□□□□□ -0.94
RFC5YBR087W YIL055CP40523 627 aaKnown RBP9.14□□□□□ -0.95
RFC5YBR087W SIS1P25294 352 aaKnown RBP9.05□□□□□ -0.96
RFC5YBR087W RSM7P47150 247 aa9.01□□□□□ -0.97
RFC5YBR087W BBC1P47068 1157 aa8.98□□□□□ -0.97
RFC5YBR087W YAH1Q12184 172 aaKnown RBP8.98□□□□□ -0.97
RFC5YBR087W AI2P03876 854 aa8.96□□□□□ -0.98
RFC5YBR087W MST1P07236 462 aa8.94□□□□□ -0.98
RFC5YBR087W YOR238WQ08634 303 aa8.92□□□□□ -0.98
RFC5YBR087W NSR1P27476 414 aaKnown RBP RIP-Chip data8.89□□□□□ -0.99not detected
RFC5YBR087W YBL029C-AQ3E756 94 aa8.86□□□□□ -0.99
RFC5YBR087W YAP5P40574 245 aa8.82□□□□□ -1
RFC5YBR087W YLR271WQ06152 274 aa8.82□□□□□ -1
RFC5YBR087W VNX1P42839 908 aa8.74□□□□□ -1.01
RFC5YBR087W PSD2P53037 1138 aaKnown RBP8.72□□□□□ -1.01
RFC5YBR087W WSC3Q12215 556 aa8.68□□□□□ -1.02
RFC5YBR087W SPP1Q03012 353 aa8.67□□□□□ -1.02
RFC5YBR087W SSP1P38871 571 aa8.64□□□□□ -1.03
RFC5YBR087W GTT3P39996 337 aa8.64□□□□□ -1.03
RFC5YBR087W MRM1P25270 412 aa8.62□□□□□ -1.03
RFC5YBR087W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.61□□□□□ -1.03not detected
RFC5YBR087W PIB1Q06651 286 aa8.58□□□□□ -1.04
RFC5YBR087W TIF11P38912 153 aaKnown RBP8.57□□□□□ -1.04
RFC5YBR087W FKH1P40466 484 aa8.5□□□□□ -1.05
RFC5YBR087W CST9Q06032 482 aa8.5□□□□□ -1.05
RFC5YBR087W AIR2Q12476 344 aaKnown RBP8.5□□□□□ -1.05
RFC5YBR087W MGA2P40578 1113 aa8.46□□□□□ -1.06
RFC5YBR087W ULI1P43604 169 aa8.46□□□□□ -1.06
RFC5YBR087W LDB19Q12502 818 aa8.45□□□□□ -1.06
RFC5YBR087W IOC2Q12072 812 aa8.44□□□□□ -1.06
RFC5YBR087W VPS29P38759 282 aa8.43□□□□□ -1.06
RFC5YBR087W YMR1P47147 688 aaKnown RBP RIP-Chip data8.43□□□□□ -1.06not detected
RFC5YBR087W RTG3P38165 486 aa8.42□□□□□ -1.06
RFC5YBR087W YJL171CP46992 396 aa8.42□□□□□ -1.06
RFC5YBR087W MSB4Q12317 492 aa8.42□□□□□ -1.06
RFC5YBR087W DBP1P24784 617 aaKnown RBP8.4□□□□□ -1.06
RFC5YBR087W YFR006WP43590 535 aa8.38□□□□□ -1.07
RFC5YBR087W YOL036WQ08206 761 aa8.38□□□□□ -1.07
RFC5YBR087W EAP1P36041 632 aaKnown RBP8.37□□□□□ -1.07
RFC5YBR087W SET4P42948 560 aa8.36□□□□□ -1.07
RFC5YBR087W STS1P38637 319 aa8.35□□□□□ -1.07
RFC5YBR087W VMA1P17255 1071 aaKnown RBP8.33□□□□□ -1.08
RFC5YBR087W RCR1P38212 213 aa8.32□□□□□ -1.08
RFC5YBR087W TRP5P00931 707 aaKnown RBP8.31□□□□□ -1.08
RFC5YBR087W BMT6Q12291 365 aa8.31□□□□□ -1.08
RFC5YBR087W RTG1P32607 177 aa8.28□□□□□ -1.08
RFC5YBR087W SAM3Q08986 587 aa8.28□□□□□ -1.08
RFC5YBR087W YNL035CP53962 389 aaKnown RBP8.23□□□□□ -1.09
RFC5YBR087W NCR1Q12200 1170 aa8.22□□□□□ -1.09
RFC5YBR087W SEC61P32915 480 aa8.2□□□□□ -1.1
RFC5YBR087W GYP5Q12344 894 aa8.16□□□□□ -1.1
RFC5YBR087W ABP1P15891 592 aaKnown RBP8.15□□□□□ -1.1
RFC5YBR087W DAN4P47179 1161 aa8.11□□□□□ -1.11
RFC5YBR087W JIP4Q03361 876 aa8.11□□□□□ -1.11
RFC5YBR087W HTA1P04911 132 aaKnown RBP8.1□□□□□ -1.11
RFC5YBR087W HTA2P04912 132 aa8.1□□□□□ -1.11
RFC5YBR087W DCW1P36091 449 aa8.1□□□□□ -1.11
RFC5YBR087W TFG1P41895 735 aaPredicted RBP8.1□□□□□ -1.11
RFC5YBR087W RQC2Q12532 1038 aaKnown RBP8.08□□□□□ -1.12
RFC5YBR087W SAP30P38429 201 aa8.05□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms