Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 NUP2YLR335W 2163 nt4.97□□□□□ -1.61
MSH4P40965 YDR366CYDR366C 399 nt4.96□□□□□ -1.62
MSH4P40965 SPO13YHR014W 876 nt4.96□□□□□ -1.62
MSH4P40965 YHR125WYHR125W 306 nt4.96□□□□□ -1.62
MSH4P40965 YHR130CYHR130C 336 nt4.96□□□□□ -1.62
MSH4P40965 AGE2YIL044C 897 nt4.96□□□□□ -1.62
MSH4P40965 SDP1YIL113W 630 nt4.96□□□□□ -1.62
MSH4P40965 POP3YNL282W 588 nt4.96□□□□□ -1.62
MSH4P40965 snR41snR41 95 nt4.96□□□□□ -1.62
MSH4P40965 UBX5YDR330W 1503 nt4.96□□□□□ -1.62
MSH4P40965 MET4YNL103W 2019 nt4.96□□□□□ -1.62
MSH4P40965 NAM2YLR382C 2685 nt4.95□□□□□ -1.62
MSH4P40965 API2YDR525W 330 nt4.95□□□□□ -1.62
MSH4P40965 HLR1YDR528W 1272 nt4.95□□□□□ -1.62
MSH4P40965 YIL021C-AYIL021C-A 270 nt4.95□□□□□ -1.62
MSH4P40965 ERP1YAR002C-A 660 nt4.95□□□□□ -1.62
MSH4P40965 ENV10YLR065C 546 nt4.95□□□□□ -1.62
MSH4P40965 HPA2YPR193C 471 nt4.95□□□□□ -1.62
MSH4P40965 KIN2YLR096W 3444 nt4.95□□□□□ -1.62
MSH4P40965 YLR152CYLR152C 1731 nt4.94□□□□□ -1.62
MSH4P40965 ROK1YGL171W 1695 nt4.94□□□□□ -1.62
MSH4P40965 TVP15YDR100W 432 nt4.94□□□□□ -1.62
MSH4P40965 VMA8YEL051W 771 nt4.94□□□□□ -1.62
MSH4P40965 YER079WYER079W 633 nt4.94□□□□□ -1.62
MSH4P40965 TWF1YGR080W 999 nt4.94□□□□□ -1.62
MSH4P40965 ARC18YLR370C 537 nt4.94□□□□□ -1.62
MSH4P40965 OCA2YNL056W 594 nt4.94□□□□□ -1.62
MSH4P40965 RPS11BYBR048W 471 nt4.94□□□□□ -1.62
MSH4P40965 CTP1YBR291C 900 nt4.94□□□□□ -1.62
MSH4P40965 AEP3YPL005W 1821 nt4.94□□□□□ -1.62
MSH4P40965 YSH1YLR277C 2340 nt4.94□□□□□ -1.62
MSH4P40965 HOYDL227C 1761 nt4.93□□□□□ -1.62
MSH4P40965 MRH4YGL064C 1686 nt4.93□□□□□ -1.62
MSH4P40965 UPC2YDR213W 2742 nt4.93□□□□□ -1.62
MSH4P40965 TSC13YDL015C 933 nt4.93□□□□□ -1.62
MSH4P40965 YDL163WYDL163W 303 nt4.93□□□□□ -1.62
MSH4P40965 AIM7YDR063W 450 nt4.93□□□□□ -1.62
MSH4P40965 YER087C-AYER087C-A 552 nt4.93□□□□□ -1.62
MSH4P40965 YGR039WYGR039W 312 nt4.93□□□□□ -1.62
MSH4P40965 TAM41YGR046W 1158 nt4.93□□□□□ -1.62
MSH4P40965 YHR138CYHR138C 345 nt4.93□□□□□ -1.62
MSH4P40965 BET3YKR068C 582 nt4.93□□□□□ -1.62
MSH4P40965 YLR287CYLR287C 1068 nt4.93□□□□□ -1.62
MSH4P40965 GPI15YNL038W 690 nt4.93□□□□□ -1.62
MSH4P40965 VPS27YNR006W 1869 nt4.93□□□□□ -1.62
MSH4P40965 YOR186WYOR186W 435 nt4.93□□□□□ -1.62
MSH4P40965 SVS1YPL163C 783 nt4.93□□□□□ -1.62
MSH4P40965 ULS1YOR191W 4860 nt4.93□□□□□ -1.62
MSH4P40965 ADP1YCR011C 3150 nt4.93□□□□□ -1.62
MSH4P40965 THR4YCR053W 1545 nt4.92□□□□□ -1.62
MSH4P40965 JHD2YJR119C 2187 nt4.92□□□□□ -1.62
MSH4P40965 YPK9YOR291W 4419 nt4.92□□□□□ -1.62
MSH4P40965 FLO8YER109C 2400 nt4.92□□□□□ -1.62
MSH4P40965 PRP3YDR473C 1410 nt4.92□□□□□ -1.62
MSH4P40965 DSL1YNL258C 2265 nt4.92□□□□□ -1.62
MSH4P40965 BSC2YDR275W 708 nt4.92□□□□□ -1.62
MSH4P40965 SPO73YER046W 432 nt4.92□□□□□ -1.62
MSH4P40965 YGL152CYGL152C 678 nt4.92□□□□□ -1.62
MSH4P40965 QCR10YHR001W-A 234 nt4.92□□□□□ -1.62
MSH4P40965 RPL40BYKR094C 387 nt4.92□□□□□ -1.62
MSH4P40965 PHO80YOL001W 882 nt4.92□□□□□ -1.62
MSH4P40965 MSN1YOL116W 1149 nt4.92□□□□□ -1.62
MSH4P40965 YPR174CYPR174C 666 nt4.92□□□□□ -1.62
MSH4P40965 MSK1YNL073W 1731 nt4.92□□□□□ -1.62
MSH4P40965 LTV1YKL143W 1392 nt4.91□□□□□ -1.62
MSH4P40965 YER119C-AYER119C-A 372 nt4.91□□□□□ -1.62
MSH4P40965 AML1YGR001C 747 nt4.91□□□□□ -1.62
MSH4P40965 RPS25AYGR027C 327 nt4.91□□□□□ -1.62
MSH4P40965 YLR297WYLR297W 390 nt4.91□□□□□ -1.62
MSH4P40965 SWS2YNL081C 432 nt4.91□□□□□ -1.62
MSH4P40965 GRX7YBR014C 612 nt4.91□□□□□ -1.62
MSH4P40965 YRO2YBR054W 1035 nt4.91□□□□□ -1.62
MSH4P40965 YPR059CYPR059C 387 nt4.91□□□□□ -1.62
MSH4P40965 SUA7YPR086W 1038 nt4.91□□□□□ -1.62
MSH4P40965 YPR197CYPR197C 564 nt4.91□□□□□ -1.62
MSH4P40965 YOR365CYOR365C 2112 nt4.91□□□□□ -1.62
MSH4P40965 SPC105YGL093W 2754 nt4.91□□□□□ -1.62
MSH4P40965 FLC1YPL221W 2382 nt4.91□□□□□ -1.62
MSH4P40965 GCD2YGR083C 1956 nt4.91□□□□□ -1.62
MSH4P40965 CTM1YHR109W 1758 nt4.91□□□□□ -1.62
MSH4P40965 SDS23YGL056C 1584 nt4.91□□□□□ -1.62
MSH4P40965 ERG11YHR007C 1593 nt4.91□□□□□ -1.62
MSH4P40965 PES4YFR023W 1836 nt4.9□□□□□ -1.62
MSH4P40965 HOS3YPL116W 2094 nt4.9□□□□□ -1.62
MSH4P40965 YCR022CYCR022C 345 nt4.9□□□□□ -1.63
MSH4P40965 CDC50YCR094W 1176 nt4.9□□□□□ -1.63
MSH4P40965 snR7-SsnR7-S 179 nt4.9□□□□□ -1.63
MSH4P40965 YDL187CYDL187C 330 nt4.9□□□□□ -1.63
MSH4P40965 VFA1YER128W 612 nt4.9□□□□□ -1.63
MSH4P40965 IES3YLR052W 753 nt4.9□□□□□ -1.63
MSH4P40965 TRM112YNR046W 408 nt4.9□□□□□ -1.63
MSH4P40965 YOL159CYOL159C 516 nt4.9□□□□□ -1.63
MSH4P40965 YPR170CYPR170C 336 nt4.9□□□□□ -1.63
MSH4P40965 MRPS9YBR146W 837 nt4.9□□□□□ -1.63
MSH4P40965 UBP6YFR010W 1500 nt4.9□□□□□ -1.63
MSH4P40965 AFR1YDR085C 1863 nt4.9□□□□□ -1.63
MSH4P40965 XKS1YGR194C 1803 nt4.89□□□□□ -1.63
MSH4P40965 PER1YCR044C 1074 nt4.89□□□□□ -1.63
MSH4P40965 PRP11YDL043C 801 nt4.89□□□□□ -1.63
MSH4P40965 NOP6YDL213C 678 nt4.89□□□□□ -1.63
Retrieved 100 of 7,029 protein–RNA pairs in 100.2 ms