RNA–Protein interactions for RNA: YHR109W

CTM1, Transcript of Cytochrome c lysine methyltransferase, yeastyeast

Gene CTM1, Length 1,758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTM1YHR109W DRS1P32892 752 aaKnown RBP10.06□□□□□ -0.8
CTM1YHR109W MTC1P47018 478 aaKnown RBP9.39□□□□□ -0.91
CTM1YHR109W BFR2Q06631 534 aaKnown RBP8.94□□□□□ -0.98
CTM1YHR109W TFA1P36100 482 aa8.75□□□□□ -1.01
CTM1YHR109W AVT3P36062 692 aa8.38□□□□□ -1.07
CTM1YHR109W DIP2Q12220 943 aaPredicted RBP8.35□□□□□ -1.07
CTM1YHR109W RQC2Q12532 1038 aaKnown RBP7.92□□□□□ -1.14
CTM1YHR109W RSE1Q04693 1361 aaKnown RBP7.7□□□□□ -1.18
CTM1YHR109W FAP1P53971 965 aa7.62□□□□□ -1.19
CTM1YHR109W DMA1P38823 416 aa7.51□□□□□ -1.21
CTM1YHR109W ISW2Q08773 1120 aa7.48□□□□□ -1.21
CTM1YHR109W RPG1P38249 964 aaKnown RBP7.44□□□□□ -1.22
CTM1YHR109W RPL17AP05740 184 aaKnown RBP7.42□□□□□ -1.22
CTM1YHR109W RPL17BP46990 184 aaKnown RBP7.42□□□□□ -1.22
CTM1YHR109W PTP3P40048 928 aa7.38□□□□□ -1.23
CTM1YHR109W REB1P21538 810 aa7.25□□□□□ -1.25
CTM1YHR109W TAF7Q05021 590 aa7.23□□□□□ -1.25
CTM1YHR109W PRI1P10363 409 aa7.22□□□□□ -1.25
CTM1YHR109W PRY3P47033 881 aa7.21□□□□□ -1.25
CTM1YHR109W RIM101P33400 625 aa7.17□□□□□ -1.26
CTM1YHR109W SPT21P35209 758 aa7.15□□□□□ -1.27
CTM1YHR109W SSP1P38871 571 aa7.11□□□□□ -1.27
CTM1YHR109W YAH1Q12184 172 aaKnown RBP7.03□□□□□ -1.28
CTM1YHR109W OXP1P28273 1286 aa7.02□□□□□ -1.29
CTM1YHR109W LEO1P38439 464 aa7.02□□□□□ -1.29
CTM1YHR109W AAD16Q02895 342 aa7□□□□□ -1.29
CTM1YHR109W TSR3Q12094 313 aaKnown RBP6.95□□□□□ -1.3
CTM1YHR109W YLR271WQ06152 274 aa6.91□□□□□ -1.3
CTM1YHR109W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.91□□□□□ -1.3not detected
CTM1YHR109W YIL055CP40523 627 aaKnown RBP6.89□□□□□ -1.31
CTM1YHR109W YCK3P39962 524 aa6.83□□□□□ -1.32
CTM1YHR109W YKR023WP36119 530 aaKnown RBP6.82□□□□□ -1.32
CTM1YHR109W SAS10Q12136 610 aaPredicted RBP6.82□□□□□ -1.32
CTM1YHR109W MGA2P40578 1113 aa6.78□□□□□ -1.32
CTM1YHR109W LEU3P08638 886 aa6.77□□□□□ -1.33
CTM1YHR109W RSM7P47150 247 aa6.77□□□□□ -1.33
CTM1YHR109W HAA1Q12753 694 aaKnown RBP6.77□□□□□ -1.33
CTM1YHR109W CST9Q06032 482 aa6.76□□□□□ -1.33
CTM1YHR109W HOP09932 586 aa6.73□□□□□ -1.33
CTM1YHR109W DCD1P06773 312 aa6.71□□□□□ -1.34
CTM1YHR109W TFC8Q12308 588 aa6.67□□□□□ -1.34
CTM1YHR109W DMA2P53924 522 aa6.63□□□□□ -1.35
CTM1YHR109W PSD2P53037 1138 aaKnown RBP6.62□□□□□ -1.35
CTM1YHR109W AI2P03876 854 aa6.62□□□□□ -1.35
CTM1YHR109W MRPL32P25348 183 aa6.61□□□□□ -1.35
CTM1YHR109W RPN1P38764 993 aaKnown RBP6.57□□□□□ -1.36
CTM1YHR109W RAM2P29703 316 aa6.55□□□□□ -1.36
CTM1YHR109W CDC27P38042 758 aa6.55□□□□□ -1.36
CTM1YHR109W SPB4P25808 606 aaPredicted RBP6.54□□□□□ -1.36
CTM1YHR109W SET1P38827 1080 aaKnown RBP6.52□□□□□ -1.37
CTM1YHR109W BCH2P36122 765 aa6.52□□□□□ -1.37
CTM1YHR109W VPS70P47161 811 aa6.52□□□□□ -1.37
CTM1YHR109W RCR1P38212 213 aa6.5□□□□□ -1.37
CTM1YHR109W BBC1P47068 1157 aa6.5□□□□□ -1.37
CTM1YHR109W MRM1P25270 412 aa6.47□□□□□ -1.37
CTM1YHR109W ABP1P15891 592 aaKnown RBP6.46□□□□□ -1.38
CTM1YHR109W EPS1P40557 701 aa6.44□□□□□ -1.38
CTM1YHR109W CKB1P43639 278 aa6.43□□□□□ -1.38
CTM1YHR109W YPR148CQ06523 435 aa6.43□□□□□ -1.38
CTM1YHR109W BDF1P35817 686 aa6.38□□□□□ -1.39
CTM1YHR109W RTG3P38165 486 aa6.37□□□□□ -1.39
CTM1YHR109W RLF2Q12495 606 aa6.36□□□□□ -1.39
CTM1YHR109W PBS2P08018 668 aa6.35□□□□□ -1.39
CTM1YHR109W IFH1P39520 1085 aa6.35□□□□□ -1.39
CTM1YHR109W MAK11P20484 414 aaKnown RBP6.34□□□□□ -1.4
CTM1YHR109W DSF2P38213 736 aa6.33□□□□□ -1.4
CTM1YHR109W KIN1P13185 1064 aa6.31□□□□□ -1.4
CTM1YHR109W SCY1P53009 804 aa6.3□□□□□ -1.4
CTM1YHR109W COQ8P27697 501 aa6.29□□□□□ -1.4
CTM1YHR109W GLC3P32775 704 aa6.29□□□□□ -1.4
CTM1YHR109W VPS29P38759 282 aa6.28□□□□□ -1.4
CTM1YHR109W YNR021WP53723 404 aaKnown RBP6.27□□□□□ -1.41
CTM1YHR109W IES2P40154 320 aa6.24□□□□□ -1.41
CTM1YHR109W MAM3Q12296 706 aa6.24□□□□□ -1.41
CTM1YHR109W DIT2P21595 489 aa6.23□□□□□ -1.41
CTM1YHR109W MIF2P35201 549 aa6.23□□□□□ -1.41
CTM1YHR109W EDS1P38073 919 aa6.21□□□□□ -1.42
CTM1YHR109W REF2P42073 533 aaPredicted RBP6.21□□□□□ -1.42
CTM1YHR109W MAP2P38174 421 aaKnown RBP6.2□□□□□ -1.42
CTM1YHR109W GUA1P38625 525 aaKnown RBP6.2□□□□□ -1.42
CTM1YHR109W NUP42P49686 430 aaKnown RBP6.2□□□□□ -1.42
CTM1YHR109W YFR006WP43590 535 aa6.19□□□□□ -1.42
CTM1YHR109W STS1P38637 319 aa6.18□□□□□ -1.42
CTM1YHR109W AIM7Q12156 149 aa6.18□□□□□ -1.42
CTM1YHR109W YMR1P47147 688 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
CTM1YHR109W DBP1P24784 617 aaKnown RBP6.14□□□□□ -1.43
CTM1YHR109W HGH1P48362 394 aaKnown RBP6.13□□□□□ -1.43
CTM1YHR109W ATF2P53296 535 aa6.13□□□□□ -1.43
CTM1YHR109W NOP53Q12080 455 aaKnown RBP6.12□□□□□ -1.43
CTM1YHR109W COX6P00427 148 aa6.11□□□□□ -1.43
CTM1YHR109W YGL015CP33199 130 aa6.11□□□□□ -1.43
CTM1YHR109W PTC3P34221 468 aaKnown RBP6.1□□□□□ -1.43
CTM1YHR109W SLX5P32828 619 aaKnown RBP6.09□□□□□ -1.43
CTM1YHR109W UBP10P53874 792 aaPredicted RBP6.09□□□□□ -1.43
CTM1YHR109W TFB3Q03290 321 aa6.09□□□□□ -1.43
CTM1YHR109W MAK21Q12176 1025 aaKnown RBP6.08□□□□□ -1.44
CTM1YHR109W VHR2P40041 505 aa6.08□□□□□ -1.44
CTM1YHR109W PIB1Q06651 286 aa6.07□□□□□ -1.44
CTM1YHR109W YOR238WQ08634 303 aa6.07□□□□□ -1.44
CTM1YHR109W PKC1P24583 1151 aa6.05□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms