RNA–Protein interactions for RNA: YBR048W

RPS11B, Transcript of Protein component of the small (40S) ribosomal subunit, yeastyeast

Gene RPS11B, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPS11BYBR048W MTC1P47018 478 aaKnown RBP11.79□□□□□ -0.52
RPS11BYBR048W FAP1P53971 965 aa10.99□□□□□ -0.65
RPS11BYBR048W DRS1P32892 752 aaKnown RBP10.63□□□□□ -0.71
RPS11BYBR048W PRY3P47033 881 aa10.36□□□□□ -0.75
RPS11BYBR048W PRI1P10363 409 aa10.15□□□□□ -0.78
RPS11BYBR048W AAD16Q02895 342 aa10.12□□□□□ -0.79
RPS11BYBR048W YCK3P39962 524 aa9.86□□□□□ -0.83
RPS11BYBR048W ISW2Q08773 1120 aa9.8□□□□□ -0.84
RPS11BYBR048W RPG1P38249 964 aaKnown RBP9.77□□□□□ -0.85
RPS11BYBR048W HAA1Q12753 694 aaKnown RBP9.68□□□□□ -0.86
RPS11BYBR048W TSR3Q12094 313 aaKnown RBP9.59□□□□□ -0.87
RPS11BYBR048W DIP2Q12220 943 aaPredicted RBP9.46□□□□□ -0.9
RPS11BYBR048W RSE1Q04693 1361 aaKnown RBP9.23□□□□□ -0.93
RPS11BYBR048W MRPL32P25348 183 aa9.17□□□□□ -0.94
RPS11BYBR048W AVT3P36062 692 aa9.03□□□□□ -0.96
RPS11BYBR048W RPL17AP05740 184 aaKnown RBP8.99□□□□□ -0.97
RPS11BYBR048W RPL17BP46990 184 aaKnown RBP8.99□□□□□ -0.97
RPS11BYBR048W REB1P21538 810 aa8.95□□□□□ -0.98
RPS11BYBR048W YGL015CP33199 130 aa8.9□□□□□ -0.98
RPS11BYBR048W BFR2Q06631 534 aaKnown RBP8.89□□□□□ -0.99
RPS11BYBR048W TFA1P36100 482 aa8.8□□□□□ -1
RPS11BYBR048W CDC27P38042 758 aa8.71□□□□□ -1.02
RPS11BYBR048W YKR023WP36119 530 aaKnown RBP8.6□□□□□ -1.03
RPS11BYBR048W SPT21P35209 758 aa8.58□□□□□ -1.04
RPS11BYBR048W MAP2P38174 421 aaKnown RBP8.46□□□□□ -1.06
RPS11BYBR048W UBP10P53874 792 aaPredicted RBP8.44□□□□□ -1.06
RPS11BYBR048W HOP09932 586 aa8.41□□□□□ -1.06
RPS11BYBR048W TFC8Q12308 588 aa8.4□□□□□ -1.06
RPS11BYBR048W DCD1P06773 312 aa8.39□□□□□ -1.07
RPS11BYBR048W BUD31P25337 157 aaPredicted RBP8.33□□□□□ -1.08
RPS11BYBR048W RIM101P33400 625 aa8.21□□□□□ -1.1
RPS11BYBR048W SCY1P53009 804 aa8.21□□□□□ -1.1
RPS11BYBR048W BCH2P36122 765 aa8.12□□□□□ -1.11
RPS11BYBR048W SLX5P32828 619 aaKnown RBP8.11□□□□□ -1.11
RPS11BYBR048W TGL3P40308 642 aa8.08□□□□□ -1.12
RPS11BYBR048W TIF4632P39936 914 aaKnown RBP8.07□□□□□ -1.12
RPS11BYBR048W RQC2Q12532 1038 aaKnown RBP8□□□□□ -1.13
RPS11BYBR048W OXP1P28273 1286 aa7.95□□□□□ -1.14
RPS11BYBR048W UBP9P39967 754 aa7.91□□□□□ -1.14
RPS11BYBR048W SIS1P25294 352 aaKnown RBP7.88□□□□□ -1.15
RPS11BYBR048W EPS1P40557 701 aa7.87□□□□□ -1.15
RPS11BYBR048W BDF1P35817 686 aa7.86□□□□□ -1.15
RPS11BYBR048W YIL055CP40523 627 aaKnown RBP7.77□□□□□ -1.17
RPS11BYBR048W PTP3P40048 928 aa7.76□□□□□ -1.17
RPS11BYBR048W MST1P07236 462 aa7.73□□□□□ -1.17
RPS11BYBR048W RSM7P47150 247 aa7.68□□□□□ -1.18
RPS11BYBR048W YOR238WQ08634 303 aa7.65□□□□□ -1.18
RPS11BYBR048W AI2P03876 854 aa7.64□□□□□ -1.19
RPS11BYBR048W YBL029C-AQ3E756 94 aa7.64□□□□□ -1.19
RPS11BYBR048W BBC1P47068 1157 aa7.62□□□□□ -1.19
RPS11BYBR048W YAH1Q12184 172 aaKnown RBP7.62□□□□□ -1.19
RPS11BYBR048W NSR1P27476 414 aaKnown RBP RIP-Chip data7.6□□□□□ -1.19 RIP-Chip
RPS11BYBR048W VNX1P42839 908 aa7.56□□□□□ -1.2
RPS11BYBR048W YAP5P40574 245 aa7.54□□□□□ -1.2
RPS11BYBR048W YLR271WQ06152 274 aa7.5□□□□□ -1.21
RPS11BYBR048W WSC3Q12215 556 aa7.47□□□□□ -1.21
RPS11BYBR048W SPP1Q03012 353 aa7.45□□□□□ -1.22
RPS11BYBR048W PSD2P53037 1138 aaKnown RBP7.42□□□□□ -1.22
RPS11BYBR048W TIF11P38912 153 aaKnown RBP7.38□□□□□ -1.23
RPS11BYBR048W GTT3P39996 337 aa7.36□□□□□ -1.23
RPS11BYBR048W PIB1Q06651 286 aa7.36□□□□□ -1.23
RPS11BYBR048W DMA1P38823 416 aa7.35□□□□□ -1.23
RPS11BYBR048W AIR2Q12476 344 aaKnown RBP7.35□□□□□ -1.23
RPS11BYBR048W MRM1P25270 412 aa7.34□□□□□ -1.23
RPS11BYBR048W FKH1P40466 484 aa7.32□□□□□ -1.24
RPS11BYBR048W SSP1P38871 571 aa7.3□□□□□ -1.24
RPS11BYBR048W ULI1P43604 169 aa7.28□□□□□ -1.24
RPS11BYBR048W IOC2Q12072 812 aa7.28□□□□□ -1.24
RPS11BYBR048W LDB19Q12502 818 aa7.27□□□□□ -1.25
RPS11BYBR048W YJL171CP46992 396 aa7.26□□□□□ -1.25
RPS11BYBR048W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.23□□□□□ -1.25not detected
RPS11BYBR048W VPS29P38759 282 aa7.22□□□□□ -1.25
RPS11BYBR048W CST9Q06032 482 aa7.22□□□□□ -1.25
RPS11BYBR048W TAF7Q05021 590 aa7.2□□□□□ -1.26
RPS11BYBR048W MSB4Q12317 492 aa7.19□□□□□ -1.26
RPS11BYBR048W DBP1P24784 617 aaKnown RBP7.18□□□□□ -1.26
RPS11BYBR048W YFR006WP43590 535 aa7.17□□□□□ -1.26
RPS11BYBR048W YMR1P47147 688 aaKnown RBP RIP-Chip data7.17□□□□□ -1.26not detected
RPS11BYBR048W YOL036WQ08206 761 aa7.17□□□□□ -1.26
RPS11BYBR048W SET4P42948 560 aa7.16□□□□□ -1.26
RPS11BYBR048W RTG3P38165 486 aa7.15□□□□□ -1.26
RPS11BYBR048W BMT6Q12291 365 aa7.15□□□□□ -1.26
RPS11BYBR048W EAP1P36041 632 aaKnown RBP7.14□□□□□ -1.27
RPS11BYBR048W STS1P38637 319 aa7.14□□□□□ -1.27
RPS11BYBR048W MGA2P40578 1113 aa7.14□□□□□ -1.27
RPS11BYBR048W TRP5P00931 707 aaKnown RBP7.13□□□□□ -1.27
RPS11BYBR048W VMA1P17255 1071 aaKnown RBP7.11□□□□□ -1.27
RPS11BYBR048W RTG1P32607 177 aa7.11□□□□□ -1.27
RPS11BYBR048W RCR1P38212 213 aa7.09□□□□□ -1.27
RPS11BYBR048W LEO1P38439 464 aa7.09□□□□□ -1.27
RPS11BYBR048W SAM3Q08986 587 aa7.09□□□□□ -1.27
RPS11BYBR048W NCR1Q12200 1170 aa7.08□□□□□ -1.28
RPS11BYBR048W YNL035CP53962 389 aaKnown RBP7.05□□□□□ -1.28
RPS11BYBR048W SEC61P32915 480 aa7.03□□□□□ -1.28
RPS11BYBR048W DAN4P47179 1161 aa6.97□□□□□ -1.29
RPS11BYBR048W GYP5Q12344 894 aa6.96□□□□□ -1.3
RPS11BYBR048W SAS10Q12136 610 aaPredicted RBP6.94□□□□□ -1.3
RPS11BYBR048W JIP4Q03361 876 aa6.93□□□□□ -1.3
RPS11BYBR048W DCW1P36091 449 aa6.92□□□□□ -1.3
RPS11BYBR048W SAP30P38429 201 aa6.91□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms