Protein–RNA interactions for Protein: O00571

DDX3X, ATP-dependent RNA helicase DDX3X, humanhuman

Known RBP eCLIP

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3XO00571 RPL31-210ENST00000441435 717 ntTSL 27.48□□□□□ -1.214e-7■□□□□ 8.8
DDX3XO00571 CMC1-208ENST00000469102 788 ntTSL 1 (best)6.95□□□□□ -1.34e-7■□□□□ 8.8
DDX3XO00571 CMC1-207ENST00000468330 551 ntTSL 46.75□□□□□ -1.334e-7■□□□□ 8.8
DDX3XO00571 CMC1-210ENST00000482499 446 ntTSL 26.5□□□□□ -1.374e-7■□□□□ 8.8
DDX3XO00571 CMC1-202ENST00000396610 593 ntTSL 25.91□□□□□ -1.464e-7■□□□□ 8.8
DDX3XO00571 CMC1-206ENST00000467644 549 ntTSL 35.56□□□□□ -1.524e-7■□□□□ 8.8
DDX3XO00571 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.554e-7■□□□□ 8.8
DDX3XO00571 CMC1-203ENST00000418849 484 ntTSL 35.16□□□□□ -1.584e-7■□□□□ 8.8
DDX3XO00571 CMC1-211ENST00000495428 608 ntTSL 34.9□□□□□ -1.634e-7■□□□□ 8.8
DDX3XO00571 AC019205.3-201ENST00000424573 156 ntBASIC3.28□□□□□ -1.884e-7■□□□□ 8.8
DDX3XO00571 ESS2-202ENST00000434568 1808 ntTSL 521.83■■□□□ 1.093e-6■□□□□ 8.8
DDX3XO00571 ESS2-203ENST00000469466 581 ntTSL 321.2■□□□□ 0.983e-6■□□□□ 8.8
DDX3XO00571 ESS2-204ENST00000472073 2101 ntTSL 519.91■□□□□ 0.783e-6■□□□□ 8.8
DDX3XO00571 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.033e-6■□□□□ 8.8
DDX3XO00571 BCAR1-210ENST00000561970 594 ntTSL 430.25■■■□□ 2.438e-9■□□□□ 8.8
DDX3XO00571 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.35■□□□□ 0.218e-9■□□□□ 8.8
DDX3XO00571 BCAR1-217ENST00000566465 547 ntTSL 415.71■□□□□ 0.118e-9■□□□□ 8.8
DDX3XO00571 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.038e-9■□□□□ 8.8
DDX3XO00571 BCAR1-219ENST00000567215 581 ntTSL 414.89□□□□□ -0.038e-9■□□□□ 8.8
DDX3XO00571 HNRNPR-205ENST00000463552 837 ntTSL 47.07□□□□□ -1.284e-39■□□□□ 8.8
DDX3XO00571 RPL13A-206ENST00000476268 1623 ntTSL 319.47■□□□□ 0.711e-86■□□□□ 8.8
DDX3XO00571 EIF1-204ENST00000469308 815 ntTSL 223.2■■□□□ 1.36e-33■□□□□ 8.8
DDX3XO00571 EIF1-202ENST00000462917 2170 ntTSL 1 (best)20.09■□□□□ 0.816e-33■□□□□ 8.8
DDX3XO00571 EIF1-201ENST00000310837 1120 ntTSL 1 (best)9.15□□□□□ -0.946e-33■□□□□ 8.8
DDX3XO00571 EIF1-207ENST00000591776 797 ntTSL 4 BASIC7.67□□□□□ -1.186e-33■□□□□ 8.8
DDX3XO00571 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.246e-33■□□□□ 8.8
DDX3XO00571 EIF1-205ENST00000482111 1428 ntTSL 26.4□□□□□ -1.396e-33■□□□□ 8.8
DDX3XO00571 SH3BP4-211ENST00000493436 481 ntTSL 317.08■□□□□ 0.323e-23■□□□□ 8.8
DDX3XO00571 SH3BP4-208ENST00000462602 257 ntTSL 59.94□□□□□ -0.823e-23■□□□□ 8.8
DDX3XO00571 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.812e-29■□□□□ 8.8
DDX3XO00571 HNRNPC-217ENST00000555176 531 ntTSL 53.55□□□□□ -1.842e-29■□□□□ 8.8
DDX3XO00571 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.42e-14■□□□□ 8.8
DDX3XO00571 KIF2A-201ENST00000381103 3360 ntTSL 1 (best) BASIC11.77□□□□□ -0.532e-14■□□□□ 8.8
DDX3XO00571 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.23e-35■□□□□ 8.8
DDX3XO00571 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.313e-35■□□□□ 8.8
DDX3XO00571 ABHD5-203ENST00000454293 464 ntTSL 319.97■□□□□ 0.798e-22■□□□□ 8.8
DDX3XO00571 SLC2A3-208ENST00000541671 590 ntTSL 212.28□□□□□ -0.442e-13■□□□□ 8.8
DDX3XO00571 SLC2A3-207ENST00000495813 1784 ntTSL 210.05□□□□□ -0.82e-13■□□□□ 8.8
DDX3XO00571 SLC2A3-205ENST00000486749 4414 ntTSL 1 (best)9.19□□□□□ -0.942e-13■□□□□ 8.8
DDX3XO00571 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.122e-13■□□□□ 8.8
DDX3XO00571 SLC2A3-203ENST00000476634 763 ntTSL 27.05□□□□□ -1.282e-13■□□□□ 8.8
DDX3XO00571 SLC2A3-210ENST00000544291 577 ntTSL 55.65□□□□□ -1.52e-13■□□□□ 8.8
DDX3XO00571 SLC2A3-211ENST00000544936 589 ntTSL 44.61□□□□□ -1.672e-13■□□□□ 8.8
DDX3XO00571 CDC27-203ENST00000526866 1420 ntTSL 218.39■□□□□ 0.536e-8■□□□□ 8.8
DDX3XO00571 CDC27-210ENST00000533415 2570 ntTSL 214.55□□□□□ -0.086e-8■□□□□ 8.8
DDX3XO00571 CDC27-209ENST00000532893 515 ntTSL 314.09□□□□□ -0.156e-8■□□□□ 8.8
DDX3XO00571 CDC27-205ENST00000528147 463 ntTSL 413.92□□□□□ -0.186e-8■□□□□ 8.8
DDX3XO00571 CDC27-217ENST00000575483 781 ntTSL 513.92□□□□□ -0.186e-8■□□□□ 8.8
DDX3XO00571 CDC27-202ENST00000525495 1459 ntTSL 512.22□□□□□ -0.456e-8■□□□□ 8.8
DDX3XO00571 CDC27-204ENST00000527547 2579 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.836e-8■□□□□ 8.8
DDX3XO00571 CDC27-201ENST00000066544 5801 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.966e-8■□□□□ 8.8
DDX3XO00571 CDC27-208ENST00000532575 765 ntTSL 38□□□□□ -1.136e-8■□□□□ 8.8
DDX3XO00571 HBE1-202ENST00000380237 913 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.852e-9■□□□□ 8.8
DDX3XO00571 HBE1-203ENST00000396895 578 ntTSL 55.81□□□□□ -1.482e-9■□□□□ 8.8
DDX3XO00571 SRSF3-206ENST00000620242 544 ntTSL 213.43□□□□□ -0.263e-48■□□□□ 8.8
DDX3XO00571 SRSF3-201ENST00000339436 1518 ntTSL 213.4□□□□□ -0.263e-48■□□□□ 8.8
DDX3XO00571 SRSF3-203ENST00000477442 1095 ntTSL 513.17□□□□□ -0.33e-48■□□□□ 8.8
DDX3XO00571 SRSF3-204ENST00000613941 595 ntTSL 49.89□□□□□ -0.833e-48■□□□□ 8.8
DDX3XO00571 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.283e-48■□□□□ 8.8
DDX3XO00571 TECR-204ENST00000594545 735 ntTSL 320.76■□□□□ 0.911e-12■□□□□ 8.8
DDX3XO00571 TECR-224ENST00000601461 828 ntTSL 311.05□□□□□ -0.641e-12■□□□□ 8.8
DDX3XO00571 TECR-215ENST00000598918 314 ntTSL 310.75□□□□□ -0.691e-12■□□□□ 8.8
DDX3XO00571 TECR-214ENST00000598715 541 ntTSL 510.35□□□□□ -0.751e-12■□□□□ 8.8
DDX3XO00571 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.663e-8■□□□□ 8.8
DDX3XO00571 LMO2-205ENST00000465614 869 ntTSL 524.09■■□□□ 1.453e-8■□□□□ 8.8
DDX3XO00571 LMO2-203ENST00000411482 1519 ntTSL 1 (best)20.88■□□□□ 0.933e-8■□□□□ 8.8
DDX3XO00571 FAF2-205ENST00000510730 684 ntTSL 319.92■□□□□ 0.783e-8■□□□□ 8.8
DDX3XO00571 MRPL53-203ENST00000467349 451 ntTSL 214.41□□□□□ -0.13e-8■□□□□ 8.8
DDX3XO00571 RAB8B-201ENST00000321437 4943 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.133e-8■□□□□ 8.8
DDX3XO00571 TRIP12-208ENST00000430954 719 ntTSL 212.84□□□□□ -0.353e-8■□□□□ 8.8
DDX3XO00571 AHNAK-203ENST00000525875 793 ntTSL 311.08□□□□□ -0.643e-8■□□□□ 8.8
DDX3XO00571 UBQLN2-201ENST00000338222 4230 ntAPPRIS P1 BASIC10.62□□□□□ -0.713e-8■□□□□ 8.8
DDX3XO00571 TRIP12-207ENST00000428959 584 ntTSL 38.98□□□□□ -0.973e-8■□□□□ 8.8
DDX3XO00571 RAB8B-202ENST00000558119 774 ntTSL 28.49□□□□□ -1.053e-8■□□□□ 8.8
DDX3XO00571 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.073e-8■□□□□ 8.8
DDX3XO00571 DNMT1-206ENST00000586086 489 ntTSL 38.08□□□□□ -1.123e-8■□□□□ 8.8
DDX3XO00571 RAB8B-205ENST00000559927 755 ntTSL 57.58□□□□□ -1.23e-8■□□□□ 8.8
DDX3XO00571 FAF2-203ENST00000506061 337 ntTSL 37.38□□□□□ -1.233e-8■□□□□ 8.8
DDX3XO00571 RAB8B-203ENST00000558990 643 ntTSL 46.82□□□□□ -1.323e-8■□□□□ 8.8
DDX3XO00571 RAB8B-204ENST00000559006 584 ntTSL 26.59□□□□□ -1.353e-8■□□□□ 8.8
DDX3XO00571 DDX42-206ENST00000578137 857 ntTSL 35.54□□□□□ -1.523e-8■□□□□ 8.8
DDX3XO00571 DDX42-211ENST00000580108 545 ntTSL 34.41□□□□□ -1.73e-8■□□□□ 8.8
DDX3XO00571 DNMT1-226ENST00000592054 591 ntTSL 43.93□□□□□ -1.783e-8■□□□□ 8.8
DDX3XO00571 SRGN-201ENST00000242465 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.621e-10■□□□□ 8.7
DDX3XO00571 SRGN-202ENST00000462445 802 ntTSL 27.59□□□□□ -1.191e-10■□□□□ 8.7
DDX3XO00571 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.282e-8■□□□□ 8.7
DDX3XO00571 TEAD1-204ENST00000527376 477 ntTSL 322.33■■□□□ 1.172e-8■□□□□ 8.7
DDX3XO00571 CAP1-215ENST00000446031 273 ntTSL 310.28□□□□□ -0.768e-17■□□□□ 8.7
DDX3XO00571 EPOR-204ENST00000588859 1825 ntTSL 1 (best)27.46■■□□□ 1.996e-6■□□□□ 8.7
DDX3XO00571 EPOR-207ENST00000591958 1931 ntTSL 1 (best)27.41■■□□□ 1.986e-6■□□□□ 8.7
DDX3XO00571 EPOR-202ENST00000586890 1850 ntTSL 1 (best)26.72■■□□□ 1.876e-6■□□□□ 8.7
DDX3XO00571 EPOR-203ENST00000588681 2133 ntTSL 1 (best)25.49■■□□□ 1.676e-6■□□□□ 8.7
DDX3XO00571 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.02■□□□□ 0.966e-6■□□□□ 8.7
DDX3XO00571 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.896e-6■□□□□ 8.7
DDX3XO00571 NMT1-208ENST00000588975 183 ntTSL 1 (best)16.12■□□□□ 0.176e-11■□□□□ 8.7
DDX3XO00571 NMT1-209ENST00000590114 666 ntTSL 313.7□□□□□ -0.226e-11■□□□□ 8.7
DDX3XO00571 NVL-201ENST00000281701 3123 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.36e-6■□□□□ 8.7
DDX3XO00571 NMT1-213ENST00000592782 4999 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.326e-11■□□□□ 8.7
DDX3XO00571 NMT1-203ENST00000585561 807 ntTSL 312.79□□□□□ -0.366e-11■□□□□ 8.7
DDX3XO00571 KIF14-201ENST00000367350 7274 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.436e-6■□□□□ 8.7
Retrieved 100 of 47,714 protein–RNA pairs in 4214 ms