RNA–Protein interactions for RNA: ENST00000242465.3

SRGN-201, Transcript of serglycin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGN, Length 1,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGN-201ENST00000242465 AEBP2Q6ZN18 517 aaPredicted RBP27.99■■■□□ 2.07
SRGN-201ENST00000242465 NISCHQ9Y2I1 1504 aa27.09■■□□□ 1.93
SRGN-201ENST00000242465 CHIC1Q5VXU3 224 aa26.88■■□□□ 1.89
SRGN-201ENST00000242465 CCDC180Q9P1Z9 1646 aa24.17■■□□□ 1.46
SRGN-201ENST00000242465 ABCC9O60706 1549 aa23.89■■□□□ 1.41
SRGN-201ENST00000242465 SENP3Q9H4L4 574 aaPredicted RBP23.81■■□□□ 1.4
SRGN-201ENST00000242465 PHF23Q9BUL5 403 aaPredicted RBP23.61■■□□□ 1.37
SRGN-201ENST00000242465 RB1CC1Q8TDY2 1594 aa22.85■■□□□ 1.25
SRGN-201ENST00000242465 NACADO15069 1562 aa22.76■■□□□ 1.23
SRGN-201ENST00000242465 DCAF8L2P0C7V8 631 aa22.65■■□□□ 1.22
SRGN-201ENST00000242465 MYO15BQ96JP2 1530 aa22.57■■□□□ 1.2
SRGN-201ENST00000242465 ZCCHC6Q5VYS8 1495 aaKnown RBP22.54■■□□□ 1.2
SRGN-201ENST00000242465 DCAF1Q9Y4B6 1507 aa22.39■■□□□ 1.17
SRGN-201ENST00000242465 UNC13AQ9UPW8 1703 aa22.38■■□□□ 1.17
SRGN-201ENST00000242465 PABPN1Q86U42 306 aaKnown RBP eCLIP22.27■■□□□ 1.16
SRGN-201ENST00000242465 BICRAQ9NZM4 1560 aa22.23■■□□□ 1.15
SRGN-201ENST00000242465 FOXD1Q16676 465 aa22.18■■□□□ 1.14
SRGN-201ENST00000242465 DNAJC5BQ9UF47 199 aa22.15■■□□□ 1.14
SRGN-201ENST00000242465 SCRIBQ14160 1630 aa22.06■■□□□ 1.12
SRGN-201ENST00000242465 SHROOM4Q9ULL8 1493 aa21.91■■□□□ 1.1
SRGN-201ENST00000242465 EIF4G1Q04637 1599 aaKnown RBP21.63■■□□□ 1.05
SRGN-201ENST00000242465 PLPPR3Q6T4P5 718 aa21.63■■□□□ 1.05
SRGN-201ENST00000242465 CC2D2AQ9P2K1 1620 aa21.6■■□□□ 1.05
SRGN-201ENST00000242465 CECR2Q9BXF3 1484 aa21.47■■□□□ 1.03
SRGN-201ENST00000242465 SMARCA4P51532 1647 aa21.07■□□□□ 0.96
SRGN-201ENST00000242465 NCAPD3P42695 1498 aa21.02■□□□□ 0.96
SRGN-201ENST00000242465 PPP6R1Q9UPN7 881 aa21.01■□□□□ 0.95
SRGN-201ENST00000242465 ATAD2BQ9ULI0 1458 aa21.01■□□□□ 0.95
SRGN-201ENST00000242465 BAZ1AQ9NRL2 1556 aaPredicted RBP20.99■□□□□ 0.95
SRGN-201ENST00000242465 ADRA2BP18089 450 aa20.99■□□□□ 0.95
SRGN-201ENST00000242465 SMARCA2P51531 1590 aa20.95■□□□□ 0.94
SRGN-201ENST00000242465 HMGXB3Q12766 1538 aa20.91■□□□□ 0.94
SRGN-201ENST00000242465 MROH2BQ7Z745 1585 aa20.89■□□□□ 0.94
SRGN-201ENST00000242465 PEG3Q9GZU2 1588 aa20.88■□□□□ 0.93
SRGN-201ENST00000242465 PIAS4Q8N2W9 510 aaPredicted RBP20.83■□□□□ 0.93
SRGN-201ENST00000242465 BAZ1BQ9UIG0 1483 aaKnown RBP20.81■□□□□ 0.92
SRGN-201ENST00000242465 WIZO95785 1651 aa20.66■□□□□ 0.9
SRGN-201ENST00000242465 NESP48681 1621 aa20.63■□□□□ 0.89
SRGN-201ENST00000242465 MSH5O43196 834 aa20.6■□□□□ 0.89
SRGN-201ENST00000242465 ERCC6Q03468 1493 aa20.57■□□□□ 0.88
SRGN-201ENST00000242465 RSF1Q96T23 1441 aaPredicted RBP20.56■□□□□ 0.88
SRGN-201ENST00000242465 LAMC3Q9Y6N6 1575 aa20.5■□□□□ 0.87
SRGN-201ENST00000242465 CUX2O14529 1486 aa20.44■□□□□ 0.86
SRGN-201ENST00000242465 TOP2AP11388 1531 aaKnown RBP20.41■□□□□ 0.86
SRGN-201ENST00000242465 CADPSQ9ULU8 1353 aa20.38■□□□□ 0.85
SRGN-201ENST00000242465 KIF21AQ7Z4S6 1674 aa20.37■□□□□ 0.85
SRGN-201ENST00000242465 THOC2Q8NI27 1593 aaKnown RBP20.37■□□□□ 0.85
SRGN-201ENST00000242465 PDS5BQ9NTI5 1447 aa20.34■□□□□ 0.85
SRGN-201ENST00000242465 CFTRP13569 1480 aa20.24■□□□□ 0.83
SRGN-201ENST00000242465 MRC2Q9UBG0 1479 aa20.18■□□□□ 0.82
SRGN-201ENST00000242465 CCDC88BA6NC98 1476 aa20.17■□□□□ 0.82
SRGN-201ENST00000242465 FANCD2Q9BXW9 1451 aa20.17■□□□□ 0.82
SRGN-201ENST00000242465 CEP164Q9UPV0 1460 aa20.16■□□□□ 0.82
SRGN-201ENST00000242465 WDR62O43379 1518 aa20.14■□□□□ 0.81
SRGN-201ENST00000242465 DNAJC5Q9H3Z4 198 aa20.07■□□□□ 0.8
SRGN-201ENST00000242465 PRDM2Q13029 1718 aa20.06■□□□□ 0.8
SRGN-201ENST00000242465 URB2Q14146 1524 aaKnown RBP20.02■□□□□ 0.79
SRGN-201ENST00000242465 TOPBP1Q92547 1522 aa19.83■□□□□ 0.77
SRGN-201ENST00000242465 SUPT5HO00267 1087 aaKnown RBP19.82■□□□□ 0.76
SRGN-201ENST00000242465 DNMBPQ6XZF7 1577 aa19.78■□□□□ 0.76
SRGN-201ENST00000242465 ABCC8Q09428 1581 aa19.76■□□□□ 0.75
SRGN-201ENST00000242465 IFT140Q96RY7 1462 aa19.73■□□□□ 0.75
SRGN-201ENST00000242465 ZNF608Q9ULD9 1512 aaPredicted RBP19.71■□□□□ 0.75
SRGN-201ENST00000242465 TARBP1Q13395 1621 aaKnown RBP19.65■□□□□ 0.74
SRGN-201ENST00000242465 POLA1P09884 1462 aaPredicted RBP19.65■□□□□ 0.74
SRGN-201ENST00000242465 EIF4G3O43432 1585 aaKnown RBP19.62■□□□□ 0.73
SRGN-201ENST00000242465 CUX1P39880 1505 aa19.61■□□□□ 0.73
SRGN-201ENST00000242465 POTEDQ86YR6 584 aa19.58■□□□□ 0.72
SRGN-201ENST00000242465 RAD54L2Q9Y4B4 1467 aa19.57■□□□□ 0.72
SRGN-201ENST00000242465 FGD5Q6ZNL6 1462 aa19.56■□□□□ 0.72
SRGN-201ENST00000242465 AQRO60306 1485 aaKnown RBP eCLIP19.55■□□□□ 0.72
SRGN-201ENST00000242465 SOGA1O94964 1423 aa19.53■□□□□ 0.72
SRGN-201ENST00000242465 OSCARQ8IYS5 282 aa19.52■□□□□ 0.72
SRGN-201ENST00000242465 TDRD9Q8NDG6 1382 aaKnown RBP19.47■□□□□ 0.71
SRGN-201ENST00000242465 WDR97A6NE52 1622 aa19.44■□□□□ 0.7
SRGN-201ENST00000242465 CHD1O14646 1710 aa19.41■□□□□ 0.7
SRGN-201ENST00000242465 SYNJ1O43426 1573 aa19.38■□□□□ 0.69
SRGN-201ENST00000242465 TOP2BQ02880 1626 aa19.37■□□□□ 0.69
SRGN-201ENST00000242465 BIVM-ERCC5R4GMW8 1640 aa19.37■□□□□ 0.69
SRGN-201ENST00000242465 SNAPC4Q5SXM2 1469 aa19.37■□□□□ 0.69
SRGN-201ENST00000242465 WRNQ14191 1432 aaPredicted RBP eCLIP19.37■□□□□ 0.69
SRGN-201ENST00000242465 ABCA10Q8WWZ4 1543 aa19.35■□□□□ 0.69
SRGN-201ENST00000242465 GRIN2BQ13224 1484 aa19.34■□□□□ 0.69
SRGN-201ENST00000242465 ABCA5Q8WWZ7 1642 aa19.33■□□□□ 0.68
SRGN-201ENST00000242465 PBRM1Q86U86 1689 aa19.31■□□□□ 0.68
SRGN-201ENST00000242465 GAPVD1Q14C86 1478 aa19.31■□□□□ 0.68
SRGN-201ENST00000242465 MAGI1Q96QZ7 1491 aaPredicted RBP19.31■□□□□ 0.68
SRGN-201ENST00000242465 FBLN2P98095 1184 aa19.31■□□□□ 0.68
SRGN-201ENST00000242465 TRIM41Q8WV44 630 aa19.31■□□□□ 0.68
SRGN-201ENST00000242465 RIMBP3CA6NJZ7 1639 aa19.3■□□□□ 0.68
SRGN-201ENST00000242465 RIMBP3BA6NNM3 1639 aa19.3■□□□□ 0.68
SRGN-201ENST00000242465 RIMBP3Q9UFD9 1639 aa19.3■□□□□ 0.68
SRGN-201ENST00000242465 ARHGEF11O15085 1522 aa19.26■□□□□ 0.67
SRGN-201ENST00000242465 SYNJ2O15056 1496 aa19.25■□□□□ 0.67
SRGN-201ENST00000242465 CHMP7Q8WUX9 453 aaPredicted RBP19.21■□□□□ 0.67
SRGN-201ENST00000242465 CLASP1Q7Z460 1538 aa19.2■□□□□ 0.66
SRGN-201ENST00000242465 MAPK8IP2Q13387 824 aaPredicted RBP19.2■□□□□ 0.66
SRGN-201ENST00000242465 SCAF1Q9H7N4 1312 aaKnown RBP19.18■□□□□ 0.66
SRGN-201ENST00000242465 ADAMTS12P58397 1594 aa19.15■□□□□ 0.66
SRGN-201ENST00000242465 ERICH3Q5RHP9 1530 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms