RNA–Protein interactions for RNA: ENST00000430246.6

HNRNPC-203, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 4,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-203ENST00000430246 CHIC1Q5VXU3 224 aa8.65□□□□□ -1.02
HNRNPC-203ENST00000430246 AEBP2Q6ZN18 517 aaPredicted RBP8.48□□□□□ -1.05
HNRNPC-203ENST00000430246 SENP3Q9H4L4 574 aaPredicted RBP7.86□□□□□ -1.15
HNRNPC-203ENST00000430246 PHF23Q9BUL5 403 aaPredicted RBP7.5□□□□□ -1.21
HNRNPC-203ENST00000430246 NISCHQ9Y2I1 1504 aa7.47□□□□□ -1.21
HNRNPC-203ENST00000430246 MSH5O43196 834 aa7□□□□□ -1.29
HNRNPC-203ENST00000430246 SLC24A1O60721 1099 aa6.97□□□□□ -1.29
HNRNPC-203ENST00000430246 FOXD1Q16676 465 aa6.93□□□□□ -1.3
HNRNPC-203ENST00000430246 PLPPR3Q6T4P5 718 aa6.91□□□□□ -1.3
HNRNPC-203ENST00000430246 PIAS4Q8N2W9 510 aaPredicted RBP6.68□□□□□ -1.34
HNRNPC-203ENST00000430246 EHMT2Q96KQ7 1210 aa6.64□□□□□ -1.35
HNRNPC-203ENST00000430246 POTEDQ86YR6 584 aa6.6□□□□□ -1.35
HNRNPC-203ENST00000430246 CCDC180Q9P1Z9 1646 aa6.53□□□□□ -1.36
HNRNPC-203ENST00000430246 SCAF1Q9H7N4 1312 aaKnown RBP6.52□□□□□ -1.37
HNRNPC-203ENST00000430246 RTN4Q9NQC3 1192 aaKnown RBP6.48□□□□□ -1.37
HNRNPC-203ENST00000430246 ADRA2BP18089 450 aa6.37□□□□□ -1.39
HNRNPC-203ENST00000430246 PRKCSHP14314 528 aaPredicted RBP6.35□□□□□ -1.39
HNRNPC-203ENST00000430246 ZCCHC6Q5VYS8 1495 aaKnown RBP6.33□□□□□ -1.4
HNRNPC-203ENST00000430246 DCAF1Q9Y4B6 1507 aa6.27□□□□□ -1.41
HNRNPC-203ENST00000430246 KCNA4P22459 653 aa6.24□□□□□ -1.41
HNRNPC-203ENST00000430246 PPP6R1Q9UPN7 881 aa6.2□□□□□ -1.42
HNRNPC-203ENST00000430246 CSRNP3Q8WYN3 585 aa6.17□□□□□ -1.42
HNRNPC-203ENST00000430246 DAXXQ9UER7 740 aaPredicted RBP6.17□□□□□ -1.42
HNRNPC-203ENST00000430246 MYO15BQ96JP2 1530 aa6.14□□□□□ -1.43
HNRNPC-203ENST00000430246 TIMELESSQ9UNS1 1208 aa6.12□□□□□ -1.43
HNRNPC-203ENST00000430246 NCBP3Q53F19 620 aaKnown RBP6.12□□□□□ -1.43
HNRNPC-203ENST00000430246 DMRT2Q9Y5R5 561 aa6.09□□□□□ -1.44
HNRNPC-203ENST00000430246 SHROOM4Q9ULL8 1493 aa6.02□□□□□ -1.45
HNRNPC-203ENST00000430246 APLP2Q06481 763 aa6□□□□□ -1.45
HNRNPC-203ENST00000430246 NACADO15069 1562 aa5.99□□□□□ -1.45
HNRNPC-203ENST00000430246 ABCC9O60706 1549 aa5.98□□□□□ -1.45
HNRNPC-203ENST00000430246 DCAF8L1A6NGE4 600 aa5.97□□□□□ -1.45
HNRNPC-203ENST00000430246 CNKSR2Q8WXI2 1034 aa5.97□□□□□ -1.45
HNRNPC-203ENST00000430246 KLHL34Q8N239 644 aa5.96□□□□□ -1.45
HNRNPC-203ENST00000430246 CACNB1Q02641 598 aaPredicted RBP5.95□□□□□ -1.46
HNRNPC-203ENST00000430246 PPP4R3CPQ6ZMV5 832 aa5.93□□□□□ -1.46
HNRNPC-203ENST00000430246 TULP1O00294 542 aaPredicted RBP5.91□□□□□ -1.46
HNRNPC-203ENST00000430246 DNAJC5BQ9UF47 199 aa5.89□□□□□ -1.47
HNRNPC-203ENST00000430246 SUPT5HO00267 1087 aaKnown RBP5.88□□□□□ -1.47
HNRNPC-203ENST00000430246 SCRIBQ14160 1630 aa5.88□□□□□ -1.47
HNRNPC-203ENST00000430246 RNF216Q9NWF9 866 aaPredicted RBP5.87□□□□□ -1.47
HNRNPC-203ENST00000430246 RB1CC1Q8TDY2 1594 aa5.87□□□□□ -1.47
HNRNPC-203ENST00000430246 DCAF8L2P0C7V8 631 aa5.86□□□□□ -1.47
HNRNPC-203ENST00000430246 PLEKHG5O94827 1062 aa5.85□□□□□ -1.47
HNRNPC-203ENST00000430246 AMER1Q5JTC6 1135 aaPredicted RBP5.85□□□□□ -1.47
HNRNPC-203ENST00000430246 TAOK2Q9UL54 1235 aa5.83□□□□□ -1.48
HNRNPC-203ENST00000430246 RSF1Q96T23 1441 aaPredicted RBP5.82□□□□□ -1.48
HNRNPC-203ENST00000430246 C1QBPQ07021 282 aaKnown RBP5.82□□□□□ -1.48
HNRNPC-203ENST00000430246 HOXD11P31277 338 aaPredicted RBP5.81□□□□□ -1.48
HNRNPC-203ENST00000430246 ZBTB22O15209 634 aa5.81□□□□□ -1.48
HNRNPC-203ENST00000430246 UNC13AQ9UPW8 1703 aa5.79□□□□□ -1.48
HNRNPC-203ENST00000430246 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.78□□□□□ -1.482e-26■■□□□ 12.1
HNRNPC-203ENST00000430246 BAZ1AQ9NRL2 1556 aaPredicted RBP5.77□□□□□ -1.49
HNRNPC-203ENST00000430246 TPRNQ4KMQ1 711 aa5.76□□□□□ -1.49
HNRNPC-203ENST00000430246 MAPK8IP2Q13387 824 aaPredicted RBP5.75□□□□□ -1.49
HNRNPC-203ENST00000430246 MROH2BQ7Z745 1585 aa5.73□□□□□ -1.49
HNRNPC-203ENST00000430246 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.73□□□□□ -1.49
HNRNPC-203ENST00000430246 HNRNPUL2Q1KMD3 747 aaKnown RBP5.73□□□□□ -1.49
HNRNPC-203ENST00000430246 EIF4G1Q04637 1599 aaKnown RBP5.72□□□□□ -1.49
HNRNPC-203ENST00000430246 SMARCA4P51532 1647 aa5.72□□□□□ -1.49
HNRNPC-203ENST00000430246 WIZO95785 1651 aa5.71□□□□□ -1.5
HNRNPC-203ENST00000430246 CECR2Q9BXF3 1484 aa5.71□□□□□ -1.5
HNRNPC-203ENST00000430246 TOP2AP11388 1531 aaKnown RBP5.71□□□□□ -1.5
HNRNPC-203ENST00000430246 ARXQ96QS3 562 aa5.7□□□□□ -1.5
HNRNPC-203ENST00000430246 PEG3Q9GZU2 1588 aa5.7□□□□□ -1.5
HNRNPC-203ENST00000430246 PODXL2Q9NZ53 605 aa5.68□□□□□ -1.5
HNRNPC-203ENST00000430246 BICRAQ9NZM4 1560 aa5.67□□□□□ -1.5
HNRNPC-203ENST00000430246 LOC105371045A0A1W2PR82 267 aa5.65□□□□□ -1.51
HNRNPC-203ENST00000430246 RNF39Q9H2S5 420 aa5.64□□□□□ -1.51
HNRNPC-203ENST00000430246 SMARCA2P51531 1590 aa5.64□□□□□ -1.51
HNRNPC-203ENST00000430246 KDM2AQ9Y2K7 1162 aa5.6□□□□□ -1.51
HNRNPC-203ENST00000430246 FBLN2P98095 1184 aa5.59□□□□□ -1.51
HNRNPC-203ENST00000430246 PLCB2Q00722 1185 aa5.59□□□□□ -1.51
HNRNPC-203ENST00000430246 CCDC88BA6NC98 1476 aa5.59□□□□□ -1.51
HNRNPC-203ENST00000430246 SLC4A1APQ9BWU0 796 aaKnown RBP5.59□□□□□ -1.51
HNRNPC-203ENST00000430246 EIF5BO60841 1220 aaKnown RBP5.58□□□□□ -1.52
HNRNPC-203ENST00000430246 TRIM41Q8WV44 630 aa5.58□□□□□ -1.52
HNRNPC-203ENST00000430246 EEA1Q15075 1411 aa5.57□□□□□ -1.52
HNRNPC-203ENST00000430246 HRCP23327 699 aa5.56□□□□□ -1.52
HNRNPC-203ENST00000430246 TRIM26Q12899 539 aaPredicted RBP5.56□□□□□ -1.52
HNRNPC-203ENST00000430246 SAMD1Q6SPF0 538 aaPredicted RBP5.56□□□□□ -1.52
HNRNPC-203ENST00000430246 GTF3C3Q9Y5Q9 886 aa5.55□□□□□ -1.52
HNRNPC-203ENST00000430246 UBTFP17480 764 aaKnown RBP5.55□□□□□ -1.52
HNRNPC-203ENST00000430246 HMGXB3Q12766 1538 aa5.54□□□□□ -1.52
HNRNPC-203ENST00000430246 ERICH6Q7L0X2 663 aa5.54□□□□□ -1.52
HNRNPC-203ENST00000430246 ATAD2BQ9ULI0 1458 aa5.54□□□□□ -1.52
HNRNPC-203ENST00000430246 ZNF219Q9P2Y4 722 aaPredicted RBP5.53□□□□□ -1.52
HNRNPC-203ENST00000430246 HOMEZQ8IX15 550 aa5.52□□□□□ -1.53
HNRNPC-203ENST00000430246 PRDM2Q13029 1718 aa5.52□□□□□ -1.53
HNRNPC-203ENST00000430246 BAZ1BQ9UIG0 1483 aaKnown RBP5.51□□□□□ -1.53
HNRNPC-203ENST00000430246 CAPN15O75808 1086 aa5.51□□□□□ -1.53
HNRNPC-203ENST00000430246 TRHP20396 242 aaPredicted RBP5.51□□□□□ -1.53
HNRNPC-203ENST00000430246 BCANQ96GW7 911 aa5.51□□□□□ -1.53
HNRNPC-203ENST00000430246 WRNQ14191 1432 aaPredicted RBP eCLIP5.5□□□□□ -1.53
HNRNPC-203ENST00000430246 ABCC8Q09428 1581 aa5.5□□□□□ -1.53
HNRNPC-203ENST00000430246 KIF21BO75037 1637 aa5.5□□□□□ -1.53
HNRNPC-203ENST00000430246 BIVM-ERCC5R4GMW8 1640 aa5.5□□□□□ -1.53
HNRNPC-203ENST00000430246 HAP1P54257 671 aaPredicted RBP5.49□□□□□ -1.53
HNRNPC-203ENST00000430246 ZBTB12Q9Y330 459 aaPredicted RBP5.49□□□□□ -1.53
HNRNPC-203ENST00000430246 NCAPD3P42695 1498 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms