RNA–Protein interactions for RNA: ENST00000575483.5

CDC27-217, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-217ENST00000575483 NISCHQ9Y2I1 1504 aa35.28■■■■□ 3.24
CDC27-217ENST00000575483 AEBP2Q6ZN18 517 aaPredicted RBP33.83■■■■□ 3.01
CDC27-217ENST00000575483 CHIC1Q5VXU3 224 aa33■■■□□ 2.87
CDC27-217ENST00000575483 CCDC180Q9P1Z9 1646 aa31.71■■■□□ 2.67
CDC27-217ENST00000575483 ABCC9O60706 1549 aa31.6■■■□□ 2.65
CDC27-217ENST00000575483 RB1CC1Q8TDY2 1594 aa30.11■■■□□ 2.41
CDC27-217ENST00000575483 NACADO15069 1562 aa29.93■■■□□ 2.38
CDC27-217ENST00000575483 DNAJC5BQ9UF47 199 aa29.69■■■□□ 2.34
CDC27-217ENST00000575483 MYO15BQ96JP2 1530 aa29.57■■■□□ 2.32
CDC27-217ENST00000575483 UNC13AQ9UPW8 1703 aa29.57■■■□□ 2.32
CDC27-217ENST00000575483 DCAF8L2P0C7V8 631 aa29.52■■■□□ 2.32
CDC27-217ENST00000575483 PABPN1Q86U42 306 aaKnown RBP eCLIP29.37■■■□□ 2.29
CDC27-217ENST00000575483 BICRAQ9NZM4 1560 aa29.35■■■□□ 2.29
CDC27-217ENST00000575483 ZCCHC6Q5VYS8 1495 aaKnown RBP29.27■■■□□ 2.28
CDC27-217ENST00000575483 DCAF1Q9Y4B6 1507 aa29.19■■■□□ 2.26
CDC27-217ENST00000575483 PHF23Q9BUL5 403 aaPredicted RBP28.98■■■□□ 2.23
CDC27-217ENST00000575483 SHROOM4Q9ULL8 1493 aa28.9■■■□□ 2.22
CDC27-217ENST00000575483 SCRIBQ14160 1630 aa28.83■■■□□ 2.21
CDC27-217ENST00000575483 SENP3Q9H4L4 574 aaPredicted RBP28.79■■■□□ 2.2
CDC27-217ENST00000575483 CC2D2AQ9P2K1 1620 aa28.61■■■□□ 2.17
CDC27-217ENST00000575483 EIF4G1Q04637 1599 aaKnown RBP28.56■■■□□ 2.16
CDC27-217ENST00000575483 CECR2Q9BXF3 1484 aa28.47■■■□□ 2.15
CDC27-217ENST00000575483 NCAPD3P42695 1498 aa27.64■■■□□ 2.01
CDC27-217ENST00000575483 ATAD2BQ9ULI0 1458 aa27.55■■■□□ 2
CDC27-217ENST00000575483 SMARCA4P51532 1647 aa27.54■■■□□ 2
CDC27-217ENST00000575483 HMGXB3Q12766 1538 aa27.46■■□□□ 1.99
CDC27-217ENST00000575483 SMARCA2P51531 1590 aa27.44■■□□□ 1.98
CDC27-217ENST00000575483 BAZ1AQ9NRL2 1556 aaPredicted RBP27.37■■□□□ 1.97
CDC27-217ENST00000575483 PEG3Q9GZU2 1588 aa27.33■■□□□ 1.97
CDC27-217ENST00000575483 CUX2O14529 1486 aa27.27■■□□□ 1.96
CDC27-217ENST00000575483 BAZ1BQ9UIG0 1483 aaKnown RBP27.23■■□□□ 1.95
CDC27-217ENST00000575483 ERCC6Q03468 1493 aa27.22■■□□□ 1.95
CDC27-217ENST00000575483 DNAJC5Q9H3Z4 198 aa27.22■■□□□ 1.95
CDC27-217ENST00000575483 NESP48681 1621 aa27.19■■□□□ 1.94
CDC27-217ENST00000575483 MROH2BQ7Z745 1585 aa27.19■■□□□ 1.94
CDC27-217ENST00000575483 LAMC3Q9Y6N6 1575 aa27.01■■□□□ 1.92
CDC27-217ENST00000575483 THOC2Q8NI27 1593 aaKnown RBP26.99■■□□□ 1.91
CDC27-217ENST00000575483 KIF21AQ7Z4S6 1674 aa26.89■■□□□ 1.9
CDC27-217ENST00000575483 WIZO95785 1651 aa26.87■■□□□ 1.89
CDC27-217ENST00000575483 PLPPR3Q6T4P5 718 aa26.8■■□□□ 1.88
CDC27-217ENST00000575483 PDS5BQ9NTI5 1447 aa26.77■■□□□ 1.88
CDC27-217ENST00000575483 CADPSQ9ULU8 1353 aa26.74■■□□□ 1.87
CDC27-217ENST00000575483 FOXD1Q16676 465 aa26.68■■□□□ 1.86
CDC27-217ENST00000575483 RSF1Q96T23 1441 aaPredicted RBP26.61■■□□□ 1.85
CDC27-217ENST00000575483 MRC2Q9UBG0 1479 aa26.6■■□□□ 1.85
CDC27-217ENST00000575483 WDR62O43379 1518 aa26.59■■□□□ 1.85
CDC27-217ENST00000575483 TOP2AP11388 1531 aaKnown RBP26.52■■□□□ 1.84
CDC27-217ENST00000575483 CFTRP13569 1480 aa26.49■■□□□ 1.83
CDC27-217ENST00000575483 CEP164Q9UPV0 1460 aa26.47■■□□□ 1.83
CDC27-217ENST00000575483 FANCD2Q9BXW9 1451 aa26.45■■□□□ 1.82
CDC27-217ENST00000575483 PRDM2Q13029 1718 aa26.3■■□□□ 1.8
CDC27-217ENST00000575483 URB2Q14146 1524 aaKnown RBP26.29■■□□□ 1.8
CDC27-217ENST00000575483 CCDC88BA6NC98 1476 aa26.19■■□□□ 1.78
CDC27-217ENST00000575483 TOPBP1Q92547 1522 aa25.98■■□□□ 1.75
CDC27-217ENST00000575483 ZNF608Q9ULD9 1512 aaPredicted RBP25.95■■□□□ 1.74
CDC27-217ENST00000575483 IFT140Q96RY7 1462 aa25.95■■□□□ 1.74
CDC27-217ENST00000575483 OSCARQ8IYS5 282 aa25.91■■□□□ 1.74
CDC27-217ENST00000575483 TRIM41Q8WV44 630 aa25.91■■□□□ 1.74
CDC27-217ENST00000575483 DNMBPQ6XZF7 1577 aa25.89■■□□□ 1.73
CDC27-217ENST00000575483 ABCC8Q09428 1581 aa25.87■■□□□ 1.73
CDC27-217ENST00000575483 EIF4G3O43432 1585 aaKnown RBP25.82■■□□□ 1.72
CDC27-217ENST00000575483 TARBP1Q13395 1621 aaKnown RBP25.81■■□□□ 1.72
CDC27-217ENST00000575483 RIMBP3CA6NJZ7 1639 aa25.72■■□□□ 1.71
CDC27-217ENST00000575483 RIMBP3BA6NNM3 1639 aa25.72■■□□□ 1.71
CDC27-217ENST00000575483 RIMBP3Q9UFD9 1639 aa25.72■■□□□ 1.71
CDC27-217ENST00000575483 POLA1P09884 1462 aaPredicted RBP25.72■■□□□ 1.71
CDC27-217ENST00000575483 AQRO60306 1485 aaKnown RBP eCLIP25.66■■□□□ 1.77e-9■■■■■ 34.8
CDC27-217ENST00000575483 CHD1O14646 1710 aa25.65■■□□□ 1.7
CDC27-217ENST00000575483 ARHGEF11O15085 1522 aa25.62■■□□□ 1.69
CDC27-217ENST00000575483 PPP6R1Q9UPN7 881 aa25.6■■□□□ 1.69
CDC27-217ENST00000575483 RAD54L2Q9Y4B4 1467 aa25.6■■□□□ 1.69
CDC27-217ENST00000575483 ADRA2BP18089 450 aa25.58■■□□□ 1.69
CDC27-217ENST00000575483 CUX1P39880 1505 aa25.55■■□□□ 1.68
CDC27-217ENST00000575483 FGD5Q6ZNL6 1462 aa25.53■■□□□ 1.68
CDC27-217ENST00000575483 SOGA1O94964 1423 aa25.53■■□□□ 1.68
CDC27-217ENST00000575483 WDR97A6NE52 1622 aa25.52■■□□□ 1.68
CDC27-217ENST00000575483 TDRD9Q8NDG6 1382 aaKnown RBP25.48■■□□□ 1.67
CDC27-217ENST00000575483 SNAPC4Q5SXM2 1469 aa25.41■■□□□ 1.66
CDC27-217ENST00000575483 ARAP1Q96P48 1450 aa25.39■■□□□ 1.65
CDC27-217ENST00000575483 CLASP1Q7Z460 1538 aa25.37■■□□□ 1.65
CDC27-217ENST00000575483 MAGI1Q96QZ7 1491 aaPredicted RBP25.36■■□□□ 1.65
CDC27-217ENST00000575483 FBLN2P98095 1184 aa25.34■■□□□ 1.65
CDC27-217ENST00000575483 GRIN2BQ13224 1484 aa25.34■■□□□ 1.65
CDC27-217ENST00000575483 PBRM1Q86U86 1689 aa25.31■■□□□ 1.64
CDC27-217ENST00000575483 CYB5RLQ6IPT4 315 aa25.3■■□□□ 1.64
CDC27-217ENST00000575483 ABCA5Q8WWZ7 1642 aa25.28■■□□□ 1.64
CDC27-217ENST00000575483 SYNJ2O15056 1496 aa25.27■■□□□ 1.64
CDC27-217ENST00000575483 ABCA10Q8WWZ4 1543 aa25.27■■□□□ 1.64
CDC27-217ENST00000575483 SYNJ1O43426 1573 aa25.27■■□□□ 1.64
CDC27-217ENST00000575483 GAPVD1Q14C86 1478 aa25.24■■□□□ 1.63
CDC27-217ENST00000575483 SUPT5HO00267 1087 aaKnown RBP25.23■■□□□ 1.63
CDC27-217ENST00000575483 CHMP7Q8WUX9 453 aaPredicted RBP25.19■■□□□ 1.62
CDC27-217ENST00000575483 BIVM-ERCC5R4GMW8 1640 aa25.17■■□□□ 1.62
CDC27-217ENST00000575483 PIAS4Q8N2W9 510 aaPredicted RBP25.15■■□□□ 1.62
CDC27-217ENST00000575483 TOP2BQ02880 1626 aa25.14■■□□□ 1.61
CDC27-217ENST00000575483 WRNQ14191 1432 aaPredicted RBP eCLIP25.09■■□□□ 1.61
CDC27-217ENST00000575483 ADAMTS12P58397 1594 aa25.07■■□□□ 1.6
CDC27-217ENST00000575483 GRIN2AQ12879 1464 aa25.04■■□□□ 1.6
CDC27-217ENST00000575483 CEP170Q5SW79 1584 aa24.99■■□□□ 1.59
CDC27-217ENST00000575483 NUP160Q12769 1436 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms