RNA–Protein interactions for RNA: ENST00000586086.1

DNMT1-206, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 489 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-206ENST00000586086 CHIC1Q5VXU3 224 aa23.98■■□□□ 1.43
DNMT1-206ENST00000586086 AEBP2Q6ZN18 517 aaPredicted RBP23.55■■□□□ 1.36
DNMT1-206ENST00000586086 PHF23Q9BUL5 403 aaPredicted RBP21.16■□□□□ 0.98
DNMT1-206ENST00000586086 PLPPR3Q6T4P5 718 aa19.97■□□□□ 0.79
DNMT1-206ENST00000586086 SENP3Q9H4L4 574 aaPredicted RBP19.91■□□□□ 0.78
DNMT1-206ENST00000586086 ADRA2BP18089 450 aa18.63■□□□□ 0.57
DNMT1-206ENST00000586086 EHMT2Q96KQ7 1210 aa18.43■□□□□ 0.54
DNMT1-206ENST00000586086 KCNA4P22459 653 aa18.38■□□□□ 0.53
DNMT1-206ENST00000586086 PPP6R1Q9UPN7 881 aa18.38■□□□□ 0.53
DNMT1-206ENST00000586086 FOXD1Q16676 465 aa18.32■□□□□ 0.52
DNMT1-206ENST00000586086 SLC4A1APQ9BWU0 796 aaKnown RBP17.75■□□□□ 0.43
DNMT1-206ENST00000586086 PPP4R3CPQ6ZMV5 832 aa17.73■□□□□ 0.43
DNMT1-206ENST00000586086 NCBP3Q53F19 620 aaKnown RBP17.61■□□□□ 0.41
DNMT1-206ENST00000586086 PIAS4Q8N2W9 510 aaPredicted RBP17.61■□□□□ 0.41
DNMT1-206ENST00000586086 CSRNP3Q8WYN3 585 aa17.61■□□□□ 0.41
DNMT1-206ENST00000586086 NPM3O75607 178 aaKnown RBP17.24■□□□□ 0.35
DNMT1-206ENST00000586086 CNKSR2Q8WXI2 1034 aa17■□□□□ 0.31
DNMT1-206ENST00000586086 SCAF1Q9H7N4 1312 aaKnown RBP16.99■□□□□ 0.31
DNMT1-206ENST00000586086 ZBTB22O15209 634 aa16.85■□□□□ 0.29
DNMT1-206ENST00000586086 FOXD4L1Q9NU39 408 aa16.66■□□□□ 0.26
DNMT1-206ENST00000586086 MSH5O43196 834 aa16.57■□□□□ 0.24
DNMT1-206ENST00000586086 MAPK8IP2Q13387 824 aaPredicted RBP16.49■□□□□ 0.23
DNMT1-206ENST00000586086 RNF216Q9NWF9 866 aaPredicted RBP16.4■□□□□ 0.22
DNMT1-206ENST00000586086 DNAJC5BQ9UF47 199 aa16.4■□□□□ 0.22
DNMT1-206ENST00000586086 SLC24A1O60721 1099 aa16.26■□□□□ 0.19
DNMT1-206ENST00000586086 AMER1Q5JTC6 1135 aaPredicted RBP16.24■□□□□ 0.19
DNMT1-206ENST00000586086 RTN4Q9NQC3 1192 aaKnown RBP16.19■□□□□ 0.18
DNMT1-206ENST00000586086 HOXD11P31277 338 aaPredicted RBP16.02■□□□□ 0.16
DNMT1-206ENST00000586086 SLC4A2P04920 1241 aa16■□□□□ 0.15
DNMT1-206ENST00000586086 DMRT2Q9Y5R5 561 aa16■□□□□ 0.15
DNMT1-206ENST00000586086 FKBP8Q14318 412 aa15.98■□□□□ 0.15
DNMT1-206ENST00000586086 ATXN8OSP0DMR3 200 aa15.95■□□□□ 0.14
DNMT1-206ENST00000586086 MYCNP04198 464 aaPredicted RBP15.94■□□□□ 0.14
DNMT1-206ENST00000586086 DCAF8L1A6NGE4 600 aa15.51■□□□□ 0.07
DNMT1-206ENST00000586086 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.47■□□□□ 0.071e-7■■■□□ 17.6
DNMT1-206ENST00000586086 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.41■□□□□ 0.06
DNMT1-206ENST00000586086 HNRNPUL2Q1KMD3 747 aaKnown RBP15.41■□□□□ 0.06
DNMT1-206ENST00000586086 ATF5Q9Y2D1 282 aaPredicted RBP15.4■□□□□ 0.06
DNMT1-206ENST00000586086 SAMD1Q6SPF0 538 aaPredicted RBP15.38■□□□□ 0.05
DNMT1-206ENST00000586086 U3KPZ7 1027 aaPredicted RBP15.17■□□□□ 0.02
DNMT1-206ENST00000586086 FBXO3Q9UK99 471 aa15.15■□□□□ 0.02
DNMT1-206ENST00000586086 ZNF219Q9P2Y4 722 aaPredicted RBP15.1■□□□□ 0.01
DNMT1-206ENST00000586086 APLP2Q06481 763 aa15.06■□□□□ 0
DNMT1-206ENST00000586086 SPDYE4A6NLX3 237 aa15.01□□□□□ -0.01
DNMT1-206ENST00000586086 DCAF8L2P0C7V8 631 aa14.95□□□□□ -0.02
DNMT1-206ENST00000586086 PLCB2Q00722 1185 aa14.93□□□□□ -0.02
DNMT1-206ENST00000586086 HAP1P54257 671 aaPredicted RBP14.86□□□□□ -0.03
DNMT1-206ENST00000586086 VASPP50552 380 aaPredicted RBP14.85□□□□□ -0.03
DNMT1-206ENST00000586086 FBLN2P98095 1184 aa14.84□□□□□ -0.03
DNMT1-206ENST00000586086 MKRN4PQ13434 485 aaPredicted RBP14.75□□□□□ -0.05
DNMT1-206ENST00000586086 PROM2Q8N271 834 aa14.7□□□□□ -0.06
DNMT1-206ENST00000586086 TRHP20396 242 aaPredicted RBP14.69□□□□□ -0.06
DNMT1-206ENST00000586086 IFNLR1Q8IU57 520 aaPredicted RBP14.69□□□□□ -0.06
DNMT1-206ENST00000586086 BCANQ96GW7 911 aa14.63□□□□□ -0.07
DNMT1-206ENST00000586086 POLA2Q14181 598 aa14.6□□□□□ -0.07
DNMT1-206ENST00000586086 PKD2Q13563 968 aa14.55□□□□□ -0.08
DNMT1-206ENST00000586086 VSIG10Q8N0Z9 540 aa14.55□□□□□ -0.08
DNMT1-206ENST00000586086 KLHL34Q8N239 644 aa14.55□□□□□ -0.08
DNMT1-206ENST00000586086 CAPN15O75808 1086 aa14.52□□□□□ -0.09
DNMT1-206ENST00000586086 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.52□□□□□ -0.09
DNMT1-206ENST00000586086 SPINK5Q9NQ38 1064 aaPredicted RBP14.51□□□□□ -0.09
DNMT1-206ENST00000586086 SPOCK2Q92563 424 aa14.44□□□□□ -0.1
DNMT1-206ENST00000586086 ECM2O94769 699 aaPredicted RBP14.43□□□□□ -0.1
DNMT1-206ENST00000586086 PRKCSHP14314 528 aaPredicted RBP14.42□□□□□ -0.1
DNMT1-206ENST00000586086 ZBTB12Q9Y330 459 aaPredicted RBP14.42□□□□□ -0.1
DNMT1-206ENST00000586086 BBXQ8WY36 941 aaPredicted RBP14.4□□□□□ -0.1
DNMT1-206ENST00000586086 TAOK2Q9UL54 1235 aa14.39□□□□□ -0.11
DNMT1-206ENST00000586086 PAXIP1Q6ZW49 1069 aaPredicted RBP14.38□□□□□ -0.11
DNMT1-206ENST00000586086 CFAP44Q96MT7 982 aa14.38□□□□□ -0.11
DNMT1-206ENST00000586086 PLCD3Q8N3E9 789 aa14.32□□□□□ -0.12
DNMT1-206ENST00000586086 ABCB7O75027 752 aa14.3□□□□□ -0.12
DNMT1-206ENST00000586086 STAG3Q9UJ98 1225 aa14.3□□□□□ -0.12
DNMT1-206ENST00000586086 ZNF692Q9BU19 519 aaPredicted RBP14.26□□□□□ -0.13
DNMT1-206ENST00000586086 NPM1P06748 294 aaKnown RBP eCLIP14.24□□□□□ -0.13
DNMT1-206ENST00000586086 TPRNQ4KMQ1 711 aa14.24□□□□□ -0.13
DNMT1-206ENST00000586086 KDM2AQ9Y2K7 1162 aa14.24□□□□□ -0.13
DNMT1-206ENST00000586086 MIER1Q8N108 512 aa14.22□□□□□ -0.13
DNMT1-206ENST00000586086 SPRYD3Q8NCJ5 442 aa14.22□□□□□ -0.13
DNMT1-206ENST00000586086 RNF39Q9H2S5 420 aa14.22□□□□□ -0.13
DNMT1-206ENST00000586086 RGL2O15211 777 aa14.17□□□□□ -0.14
DNMT1-206ENST00000586086 C1QBPQ07021 282 aaKnown RBP14.16□□□□□ -0.14
DNMT1-206ENST00000586086 CIZ1Q9ULV3 898 aaPredicted RBP14.15□□□□□ -0.14
DNMT1-206ENST00000586086 PLEKHG5O94827 1062 aa14.12□□□□□ -0.15
DNMT1-206ENST00000586086 TSHZ2Q9NRE2 1034 aa14.1□□□□□ -0.15
DNMT1-206ENST00000586086 CHGAP10645 457 aaKnown RBP14.09□□□□□ -0.15
DNMT1-206ENST00000586086 SPDYE2BA6NHP3 402 aa14.08□□□□□ -0.16
DNMT1-206ENST00000586086 SPDYE6P0CI01 402 aa14.08□□□□□ -0.16
DNMT1-206ENST00000586086 SPDYE2Q495Y8 402 aa14.08□□□□□ -0.16
DNMT1-206ENST00000586086 PABPN1Q86U42 306 aaKnown RBP eCLIP14.08□□□□□ -0.16
DNMT1-206ENST00000586086 OSCARQ8IYS5 282 aa14.04□□□□□ -0.16
DNMT1-206ENST00000586086 ZBTB47Q9UFB7 747 aaPredicted RBP14.04□□□□□ -0.16
DNMT1-206ENST00000586086 SSUH2Q9Y2M2 353 aa14□□□□□ -0.17
DNMT1-206ENST00000586086 NBR1Q14596 966 aa13.97□□□□□ -0.17
DNMT1-206ENST00000586086 TRIM41Q8WV44 630 aa13.92□□□□□ -0.18
DNMT1-206ENST00000586086 DSG3P32926 999 aa13.9□□□□□ -0.18
DNMT1-206ENST00000586086 HS6ST3Q8IZP7 471 aa13.82□□□□□ -0.2
DNMT1-206ENST00000586086 GSE1Q14687 1217 aa13.8□□□□□ -0.2
DNMT1-206ENST00000586086 DCAF8Q5TAQ9 597 aa13.74□□□□□ -0.21
DNMT1-206ENST00000586086 DNAJC5Q9H3Z4 198 aa13.71□□□□□ -0.21
DNMT1-206ENST00000586086 RIOK3O14730 519 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms