RNA–Protein interactions for RNA: ENST00000558119.5

RAB8B-202, Transcript of RAB8B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB8B, Length 774 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB8B-202ENST00000558119 AEBP2Q6ZN18 517 aaPredicted RBP30.81■■■□□ 2.52
RAB8B-202ENST00000558119 CHIC1Q5VXU3 224 aa29.2■■■□□ 2.26
RAB8B-202ENST00000558119 SENP3Q9H4L4 574 aaPredicted RBP26.19■■□□□ 1.78
RAB8B-202ENST00000558119 PHF23Q9BUL5 403 aaPredicted RBP25.88■■□□□ 1.73
RAB8B-202ENST00000558119 FOXD1Q16676 465 aa24.46■■□□□ 1.51
RAB8B-202ENST00000558119 PLPPR3Q6T4P5 718 aa23.3■■□□□ 1.32
RAB8B-202ENST00000558119 NISCHQ9Y2I1 1504 aa23.23■■□□□ 1.31
RAB8B-202ENST00000558119 PPP6R1Q9UPN7 881 aa22.91■■□□□ 1.26
RAB8B-202ENST00000558119 PIAS4Q8N2W9 510 aaPredicted RBP22.84■■□□□ 1.25
RAB8B-202ENST00000558119 MSH5O43196 834 aa22.82■■□□□ 1.24
RAB8B-202ENST00000558119 ADRA2BP18089 450 aa22.82■■□□□ 1.24
RAB8B-202ENST00000558119 ABCC9O60706 1549 aa22.52■■□□□ 1.19
RAB8B-202ENST00000558119 POTEDQ86YR6 584 aa22.33■■□□□ 1.17
RAB8B-202ENST00000558119 DNAJC5BQ9UF47 199 aa22.24■■□□□ 1.15
RAB8B-202ENST00000558119 DNAJC5Q9H3Z4 198 aa21.36■■□□□ 1.01
RAB8B-202ENST00000558119 CCDC180Q9P1Z9 1646 aa21.2■□□□□ 0.98
RAB8B-202ENST00000558119 MAPK8IP2Q13387 824 aaPredicted RBP20.96■□□□□ 0.95
RAB8B-202ENST00000558119 PABPN1Q86U42 306 aaKnown RBP eCLIP20.88■□□□□ 0.93
RAB8B-202ENST00000558119 RB1CC1Q8TDY2 1594 aa20.87■□□□□ 0.93
RAB8B-202ENST00000558119 DMRT2Q9Y5R5 561 aa20.79■□□□□ 0.92
RAB8B-202ENST00000558119 SCAF1Q9H7N4 1312 aaKnown RBP20.77■□□□□ 0.91
RAB8B-202ENST00000558119 NACADO15069 1562 aa20.46■□□□□ 0.87
RAB8B-202ENST00000558119 CECR2Q9BXF3 1484 aa20.44■□□□□ 0.86
RAB8B-202ENST00000558119 PPP4R3CPQ6ZMV5 832 aa20.44■□□□□ 0.86
RAB8B-202ENST00000558119 DCAF8L2P0C7V8 631 aa20.31■□□□□ 0.84
RAB8B-202ENST00000558119 BICRAQ9NZM4 1560 aa20.24■□□□□ 0.83
RAB8B-202ENST00000558119 CC2D2AQ9P2K1 1620 aa20.19■□□□□ 0.82
RAB8B-202ENST00000558119 UNC13AQ9UPW8 1703 aa20.08■□□□□ 0.81
RAB8B-202ENST00000558119 CNKSR2Q8WXI2 1034 aa20.04■□□□□ 0.8
RAB8B-202ENST00000558119 HOXD11P31277 338 aaPredicted RBP20.02■□□□□ 0.8
RAB8B-202ENST00000558119 SHROOM4Q9ULL8 1493 aa19.98■□□□□ 0.79
RAB8B-202ENST00000558119 DCAF8L1A6NGE4 600 aa19.94■□□□□ 0.78
RAB8B-202ENST00000558119 TRIM41Q8WV44 630 aa19.92■□□□□ 0.78
RAB8B-202ENST00000558119 CUX2O14529 1486 aa19.92■□□□□ 0.78
RAB8B-202ENST00000558119 EIF4G1Q04637 1599 aaKnown RBP19.88■□□□□ 0.77
RAB8B-202ENST00000558119 RNF216Q9NWF9 866 aaPredicted RBP19.86■□□□□ 0.77
RAB8B-202ENST00000558119 MYO15BQ96JP2 1530 aa19.83■□□□□ 0.77
RAB8B-202ENST00000558119 NCBP3Q53F19 620 aaKnown RBP19.61■□□□□ 0.73
RAB8B-202ENST00000558119 CACNB1Q02641 598 aaPredicted RBP19.6■□□□□ 0.73
RAB8B-202ENST00000558119 ERCC6Q03468 1493 aa19.58■□□□□ 0.72
RAB8B-202ENST00000558119 RNF39Q9H2S5 420 aa19.53■□□□□ 0.72
RAB8B-202ENST00000558119 NPM3O75607 178 aaKnown RBP19.4■□□□□ 0.7
RAB8B-202ENST00000558119 SCRIBQ14160 1630 aa19.38■□□□□ 0.69
RAB8B-202ENST00000558119 C1QBPQ07021 282 aaKnown RBP19.19■□□□□ 0.66
RAB8B-202ENST00000558119 DCAF1Q9Y4B6 1507 aa19.12■□□□□ 0.65
RAB8B-202ENST00000558119 KCNA4P22459 653 aa19.07■□□□□ 0.64
RAB8B-202ENST00000558119 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.07■□□□□ 0.64
RAB8B-202ENST00000558119 NCAPD3P42695 1498 aa18.99■□□□□ 0.63
RAB8B-202ENST00000558119 ZCCHC6Q5VYS8 1495 aaKnown RBP18.97■□□□□ 0.63
RAB8B-202ENST00000558119 NESP48681 1621 aa18.96■□□□□ 0.63
RAB8B-202ENST00000558119 OSCARQ8IYS5 282 aa18.95■□□□□ 0.62
RAB8B-202ENST00000558119 THOC2Q8NI27 1593 aaKnown RBP18.91■□□□□ 0.62
RAB8B-202ENST00000558119 TRHP20396 242 aaPredicted RBP18.76■□□□□ 0.59
RAB8B-202ENST00000558119 SMARCA2P51531 1590 aa18.75■□□□□ 0.59
RAB8B-202ENST00000558119 ATAD2BQ9ULI0 1458 aa18.72■□□□□ 0.59
RAB8B-202ENST00000558119 PDS5BQ9NTI5 1447 aa18.72■□□□□ 0.59
RAB8B-202ENST00000558119 U3KPZ7 1027 aaPredicted RBP18.71■□□□□ 0.59
RAB8B-202ENST00000558119 BAZ1AQ9NRL2 1556 aaPredicted RBP18.68■□□□□ 0.58
RAB8B-202ENST00000558119 LAMC3Q9Y6N6 1575 aa18.64■□□□□ 0.57
RAB8B-202ENST00000558119 HMGXB3Q12766 1538 aa18.63■□□□□ 0.57
RAB8B-202ENST00000558119 CYB5RLQ6IPT4 315 aa18.57■□□□□ 0.56
RAB8B-202ENST00000558119 RIMBP3CA6NJZ7 1639 aa18.56■□□□□ 0.56
RAB8B-202ENST00000558119 RIMBP3BA6NNM3 1639 aa18.56■□□□□ 0.56
RAB8B-202ENST00000558119 RIMBP3Q9UFD9 1639 aa18.56■□□□□ 0.56
RAB8B-202ENST00000558119 SLC4A2P04920 1241 aa18.55■□□□□ 0.56
RAB8B-202ENST00000558119 MRC2Q9UBG0 1479 aa18.54■□□□□ 0.56
RAB8B-202ENST00000558119 KIF21AQ7Z4S6 1674 aa18.5■□□□□ 0.55
RAB8B-202ENST00000558119 BAZ1BQ9UIG0 1483 aaKnown RBP18.47■□□□□ 0.55
RAB8B-202ENST00000558119 ARHGEF11O15085 1522 aa18.47■□□□□ 0.55
RAB8B-202ENST00000558119 WDR62O43379 1518 aa18.47■□□□□ 0.55
RAB8B-202ENST00000558119 ILDR1Q86SU0 546 aaPredicted RBP18.45■□□□□ 0.54
RAB8B-202ENST00000558119 SPINK5Q9NQ38 1064 aaPredicted RBP18.45■□□□□ 0.54
RAB8B-202ENST00000558119 CADPSQ9ULU8 1353 aa18.39■□□□□ 0.53
RAB8B-202ENST00000558119 CAPN15O75808 1086 aa18.37■□□□□ 0.53
RAB8B-202ENST00000558119 SMARCA4P51532 1647 aa18.28■□□□□ 0.52
RAB8B-202ENST00000558119 DSG3P32926 999 aa18.28■□□□□ 0.52
RAB8B-202ENST00000558119 CEP164Q9UPV0 1460 aa18.23■□□□□ 0.51
RAB8B-202ENST00000558119 ARAP1Q96P48 1450 aa18.21■□□□□ 0.51
RAB8B-202ENST00000558119 PEG3Q9GZU2 1588 aa18.15■□□□□ 0.5
RAB8B-202ENST00000558119 FANCD2Q9BXW9 1451 aa18.12■□□□□ 0.49
RAB8B-202ENST00000558119 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.09■□□□□ 0.49
RAB8B-202ENST00000558119 HNRNPUL2Q1KMD3 747 aaKnown RBP18.09■□□□□ 0.49
RAB8B-202ENST00000558119 APLP2Q06481 763 aa18.07■□□□□ 0.48
RAB8B-202ENST00000558119 RSF1Q96T23 1441 aaPredicted RBP18.06■□□□□ 0.48
RAB8B-202ENST00000558119 ZNF219Q9P2Y4 722 aaPredicted RBP18.03■□□□□ 0.48
RAB8B-202ENST00000558119 SAMD1Q6SPF0 538 aaPredicted RBP18.02■□□□□ 0.48
RAB8B-202ENST00000558119 ABCB7O75027 752 aa18■□□□□ 0.47
RAB8B-202ENST00000558119 URB2Q14146 1524 aaKnown RBP17.99■□□□□ 0.47
RAB8B-202ENST00000558119 ZNF608Q9ULD9 1512 aaPredicted RBP17.98■□□□□ 0.47
RAB8B-202ENST00000558119 SLC4A1APQ9BWU0 796 aaKnown RBP17.96■□□□□ 0.47
RAB8B-202ENST00000558119 FBLN2P98095 1184 aa17.95■□□□□ 0.46
RAB8B-202ENST00000558119 IFT140Q96RY7 1462 aa17.95■□□□□ 0.46
RAB8B-202ENST00000558119 MYCNP04198 464 aaPredicted RBP17.91■□□□□ 0.46
RAB8B-202ENST00000558119 CFTRP13569 1480 aa17.88■□□□□ 0.45
RAB8B-202ENST00000558119 MROH2BQ7Z745 1585 aa17.86■□□□□ 0.45
RAB8B-202ENST00000558119 KDM4FA0A1W2PPD8 638 aa17.77■□□□□ 0.44
RAB8B-202ENST00000558119 FOXD4L1Q9NU39 408 aa17.74■□□□□ 0.43
RAB8B-202ENST00000558119 AQRO60306 1485 aaKnown RBP eCLIP17.72■□□□□ 0.434e-6■■■■■ 31
RAB8B-202ENST00000558119 EIF4G3O43432 1585 aaKnown RBP17.71■□□□□ 0.43
RAB8B-202ENST00000558119 CHD1O14646 1710 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms