RNA–Protein interactions for RNA: ENST00000495428.5

CMC1-211, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 608 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-211ENST00000495428 AEBP2Q6ZN18 517 aaPredicted RBP19.94■□□□□ 0.78
CMC1-211ENST00000495428 CHIC1Q5VXU3 224 aa18.97■□□□□ 0.63
CMC1-211ENST00000495428 SENP3Q9H4L4 574 aaPredicted RBP17.19■□□□□ 0.34
CMC1-211ENST00000495428 PHF23Q9BUL5 403 aaPredicted RBP16.85■□□□□ 0.29
CMC1-211ENST00000495428 FOXD1Q16676 465 aa16■□□□□ 0.15
CMC1-211ENST00000495428 POTEDQ86YR6 584 aa15.56■□□□□ 0.08
CMC1-211ENST00000495428 PLPPR3Q6T4P5 718 aa15.35■□□□□ 0.05
CMC1-211ENST00000495428 MSH5O43196 834 aa15.24■□□□□ 0.03
CMC1-211ENST00000495428 PIAS4Q8N2W9 510 aaPredicted RBP14.88□□□□□ -0.03
CMC1-211ENST00000495428 PPP6R1Q9UPN7 881 aa14.74□□□□□ -0.05
CMC1-211ENST00000495428 ADRA2BP18089 450 aa14.72□□□□□ -0.05
CMC1-211ENST00000495428 DMRT2Q9Y5R5 561 aa13.54□□□□□ -0.24
CMC1-211ENST00000495428 SCAF1Q9H7N4 1312 aaKnown RBP13.51□□□□□ -0.25
CMC1-211ENST00000495428 PPP4R3CPQ6ZMV5 832 aa13.5□□□□□ -0.25
CMC1-211ENST00000495428 MAPK8IP2Q13387 824 aaPredicted RBP13.46□□□□□ -0.25
CMC1-211ENST00000495428 CACNB1Q02641 598 aaPredicted RBP13.31□□□□□ -0.28
CMC1-211ENST00000495428 CNKSR2Q8WXI2 1034 aa13.17□□□□□ -0.3
CMC1-211ENST00000495428 NCBP3Q53F19 620 aaKnown RBP13.13□□□□□ -0.31
CMC1-211ENST00000495428 KCNA4P22459 653 aa13□□□□□ -0.33
CMC1-211ENST00000495428 DCAF8L1A6NGE4 600 aa12.99□□□□□ -0.33
CMC1-211ENST00000495428 RNF216Q9NWF9 866 aaPredicted RBP12.94□□□□□ -0.34
CMC1-211ENST00000495428 HOXD11P31277 338 aaPredicted RBP12.93□□□□□ -0.34
CMC1-211ENST00000495428 NPM3O75607 178 aaKnown RBP12.91□□□□□ -0.34
CMC1-211ENST00000495428 RNF39Q9H2S5 420 aa12.91□□□□□ -0.34
CMC1-211ENST00000495428 C1QBPQ07021 282 aaKnown RBP12.74□□□□□ -0.37
CMC1-211ENST00000495428 DNAJC5BQ9UF47 199 aa12.6□□□□□ -0.39
CMC1-211ENST00000495428 SLC4A1APQ9BWU0 796 aaKnown RBP12.37□□□□□ -0.43
CMC1-211ENST00000495428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.32□□□□□ -0.441e-6■■■□□ 18.6
CMC1-211ENST00000495428 SLC4A2P04920 1241 aa12.22□□□□□ -0.45
CMC1-211ENST00000495428 POTEHQ6S545 545 aa12.12□□□□□ -0.47
CMC1-211ENST00000495428 U3KPZ7 1027 aaPredicted RBP12.09□□□□□ -0.47
CMC1-211ENST00000495428 FOXD4L1Q9NU39 408 aa12.03□□□□□ -0.48
CMC1-211ENST00000495428 ZBTB22O15209 634 aa11.95□□□□□ -0.5
CMC1-211ENST00000495428 MYCNP04198 464 aaPredicted RBP11.94□□□□□ -0.5
CMC1-211ENST00000495428 DSG3P32926 999 aa11.93□□□□□ -0.5
CMC1-211ENST00000495428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.92□□□□□ -0.5
CMC1-211ENST00000495428 HNRNPUL2Q1KMD3 747 aaKnown RBP11.92□□□□□ -0.5
CMC1-211ENST00000495428 CAPN15O75808 1086 aa11.91□□□□□ -0.5
CMC1-211ENST00000495428 SAMD1Q6SPF0 538 aaPredicted RBP11.87□□□□□ -0.51
CMC1-211ENST00000495428 SPINK5Q9NQ38 1064 aaPredicted RBP11.86□□□□□ -0.51
CMC1-211ENST00000495428 APLP2Q06481 763 aa11.85□□□□□ -0.51
CMC1-211ENST00000495428 EHMT2Q96KQ7 1210 aa11.81□□□□□ -0.52
CMC1-211ENST00000495428 CSRNP3Q8WYN3 585 aa11.77□□□□□ -0.53
CMC1-211ENST00000495428 ZNF219Q9P2Y4 722 aaPredicted RBP11.69□□□□□ -0.54
CMC1-211ENST00000495428 TRHP20396 242 aaPredicted RBP11.66□□□□□ -0.54
CMC1-211ENST00000495428 ATXN8OSP0DMR3 200 aa11.65□□□□□ -0.54
CMC1-211ENST00000495428 ATF5Q9Y2D1 282 aaPredicted RBP11.6□□□□□ -0.55
CMC1-211ENST00000495428 ABCB7O75027 752 aa11.55□□□□□ -0.56
CMC1-211ENST00000495428 RBM42Q9BTD8 480 aaKnown RBP11.48□□□□□ -0.57
CMC1-211ENST00000495428 POLA2Q14181 598 aa11.45□□□□□ -0.58
CMC1-211ENST00000495428 CHRDL2Q6WN34 429 aa11.35□□□□□ -0.59
CMC1-211ENST00000495428 ZBTB12Q9Y330 459 aaPredicted RBP11.29□□□□□ -0.6
CMC1-211ENST00000495428 FBLN2P98095 1184 aa11.17□□□□□ -0.62
CMC1-211ENST00000495428 SP7Q8TDD2 431 aaPredicted RBP11.17□□□□□ -0.62
CMC1-211ENST00000495428 MKRN4PQ13434 485 aaPredicted RBP11.1□□□□□ -0.63
CMC1-211ENST00000495428 AKT1S1Q96B36 256 aa11.08□□□□□ -0.64
CMC1-211ENST00000495428 OSCARQ8IYS5 282 aa11.06□□□□□ -0.64
CMC1-211ENST00000495428 SPDYE2BA6NHP3 402 aa10.96□□□□□ -0.65
CMC1-211ENST00000495428 SPDYE6P0CI01 402 aa10.96□□□□□ -0.65
CMC1-211ENST00000495428 SPDYE2Q495Y8 402 aa10.96□□□□□ -0.65
CMC1-211ENST00000495428 PIP4P2Q8N4L2 257 aa10.96□□□□□ -0.65
CMC1-211ENST00000495428 REM2Q8IYK8 340 aaPredicted RBP10.95□□□□□ -0.66
CMC1-211ENST00000495428 HAX1O00165 279 aa10.9□□□□□ -0.66
CMC1-211ENST00000495428 ZNF692Q9BU19 519 aaPredicted RBP10.88□□□□□ -0.67
CMC1-211ENST00000495428 SSUH2Q9Y2M2 353 aa10.85□□□□□ -0.67
CMC1-211ENST00000495428 FXR2P51116 673 aaKnown RBP eCLIP10.83□□□□□ -0.68
CMC1-211ENST00000495428 PITPNM1O00562 1244 aa10.82□□□□□ -0.68
CMC1-211ENST00000495428 SPDYE4A6NLX3 237 aa10.79□□□□□ -0.68
CMC1-211ENST00000495428 PABPN1Q86U42 306 aaKnown RBP eCLIP10.72□□□□□ -0.69
CMC1-211ENST00000495428 SPDYE1Q8NFV5 336 aaPredicted RBP10.67□□□□□ -0.7
CMC1-211ENST00000495428 EVX2Q03828 476 aa10.65□□□□□ -0.7
CMC1-211ENST00000495428 FKBP8Q14318 412 aa10.65□□□□□ -0.7
CMC1-211ENST00000495428 PROM2Q8N271 834 aa10.61□□□□□ -0.71
CMC1-211ENST00000495428 CLEC11AQ9Y240 323 aa10.6□□□□□ -0.71
CMC1-211ENST00000495428 PRKAR2AP13861 404 aaKnown RBP10.55□□□□□ -0.72
CMC1-211ENST00000495428 STAG3Q9UJ98 1225 aa10.54□□□□□ -0.72
CMC1-211ENST00000495428 C19orf67A6NJJ6 358 aa10.51□□□□□ -0.73
CMC1-211ENST00000495428 PRR29P0C7W0 189 aa10.5□□□□□ -0.73
CMC1-211ENST00000495428 LHX8Q68G74 356 aa10.46□□□□□ -0.73
CMC1-211ENST00000495428 GABBR2O75899 941 aa10.45□□□□□ -0.74
CMC1-211ENST00000495428 FBXO3Q9UK99 471 aa10.35□□□□□ -0.75
CMC1-211ENST00000495428 CHADLQ6NUI6 762 aa10.34□□□□□ -0.75
CMC1-211ENST00000495428 CREBZFQ9NS37 354 aa10.32□□□□□ -0.76
CMC1-211ENST00000495428 FARP1Q9Y4F1 1045 aaPredicted RBP10.26□□□□□ -0.77
CMC1-211ENST00000495428 MIER1Q8N108 512 aa10.25□□□□□ -0.77
CMC1-211ENST00000495428 PLEKHG5O94827 1062 aa10.24□□□□□ -0.77
CMC1-211ENST00000495428 CLCN6P51797 869 aa10.24□□□□□ -0.77
CMC1-211ENST00000495428 PLCD3Q8N3E9 789 aa10.22□□□□□ -0.77
CMC1-211ENST00000495428 CD44P16070 742 aaKnown RBP10.2□□□□□ -0.78
CMC1-211ENST00000495428 POTEIP0CG38 1075 aa10.19□□□□□ -0.78
CMC1-211ENST00000495428 MNX1P50219 401 aaPredicted RBP10.19□□□□□ -0.78
CMC1-211ENST00000495428 VASPP50552 380 aaPredicted RBP10.19□□□□□ -0.78
CMC1-211ENST00000495428 NPM1P06748 294 aaKnown RBP eCLIP10.17□□□□□ -0.78
CMC1-211ENST00000495428 PLSCR2Q9NRY7 297 aa10.15□□□□□ -0.78
CMC1-211ENST00000495428 ZBTB47Q9UFB7 747 aaPredicted RBP10.14□□□□□ -0.79
CMC1-211ENST00000495428 DCBLD2Q96PD2 775 aa10.11□□□□□ -0.79
CMC1-211ENST00000495428 KLHL34Q8N239 644 aa10.05□□□□□ -0.8
CMC1-211ENST00000495428 PAK3O75914 559 aaPredicted RBP10.04□□□□□ -0.8
CMC1-211ENST00000495428 ZNF579Q8NAF0 562 aaKnown RBP10.03□□□□□ -0.8
CMC1-211ENST00000495428 IFNLR1Q8IU57 520 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms