RNA–Protein interactions for RNA: ENST00000532575.1

CDC27-208, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-208ENST00000532575 AEBP2Q6ZN18 517 aaPredicted RBP30.14■■■□□ 2.42
CDC27-208ENST00000532575 CHIC1Q5VXU3 224 aa29.45■■■□□ 2.31
CDC27-208ENST00000532575 PHF23Q9BUL5 403 aaPredicted RBP25.93■■□□□ 1.74
CDC27-208ENST00000532575 SENP3Q9H4L4 574 aaPredicted RBP25.52■■□□□ 1.68
CDC27-208ENST00000532575 PLPPR3Q6T4P5 718 aa23.92■■□□□ 1.42
CDC27-208ENST00000532575 FOXD1Q16676 465 aa23.71■■□□□ 1.39
CDC27-208ENST00000532575 PPP6R1Q9UPN7 881 aa22.86■■□□□ 1.25
CDC27-208ENST00000532575 ADRA2BP18089 450 aa22.84■■□□□ 1.25
CDC27-208ENST00000532575 PIAS4Q8N2W9 510 aaPredicted RBP22.35■■□□□ 1.17
CDC27-208ENST00000532575 MSH5O43196 834 aa21.81■■□□□ 1.08
CDC27-208ENST00000532575 PPP4R3CPQ6ZMV5 832 aa21.1■□□□□ 0.97
CDC27-208ENST00000532575 SCAF1Q9H7N4 1312 aaKnown RBP20.84■□□□□ 0.93
CDC27-208ENST00000532575 MAPK8IP2Q13387 824 aaPredicted RBP20.72■□□□□ 0.91
CDC27-208ENST00000532575 KCNA4P22459 653 aa20.68■□□□□ 0.9
CDC27-208ENST00000532575 NISCHQ9Y2I1 1504 aa20.67■□□□□ 0.9
CDC27-208ENST00000532575 NCBP3Q53F19 620 aaKnown RBP20.52■□□□□ 0.88
CDC27-208ENST00000532575 CNKSR2Q8WXI2 1034 aa20.49■□□□□ 0.87
CDC27-208ENST00000532575 DMRT2Q9Y5R5 561 aa20.39■□□□□ 0.85
CDC27-208ENST00000532575 NPM3O75607 178 aaKnown RBP20.27■□□□□ 0.84
CDC27-208ENST00000532575 RNF216Q9NWF9 866 aaPredicted RBP20.07■□□□□ 0.8
CDC27-208ENST00000532575 HOXD11P31277 338 aaPredicted RBP19.99■□□□□ 0.79
CDC27-208ENST00000532575 POTEDQ86YR6 584 aa19.82■□□□□ 0.76
CDC27-208ENST00000532575 SLC4A1APQ9BWU0 796 aaKnown RBP19.68■□□□□ 0.74
CDC27-208ENST00000532575 DNAJC5BQ9UF47 199 aa19.65■□□□□ 0.74
CDC27-208ENST00000532575 DCAF8L1A6NGE4 600 aa19.5■□□□□ 0.71
CDC27-208ENST00000532575 EHMT2Q96KQ7 1210 aa19.18■□□□□ 0.66
CDC27-208ENST00000532575 SLC4A2P04920 1241 aa19.14■□□□□ 0.65
CDC27-208ENST00000532575 ZBTB22O15209 634 aa19.04■□□□□ 0.64
CDC27-208ENST00000532575 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.04■□□□□ 0.642e-6■■□□□ 14.1
CDC27-208ENST00000532575 FOXD4L1Q9NU39 408 aa19■□□□□ 0.63
CDC27-208ENST00000532575 CSRNP3Q8WYN3 585 aa18.95■□□□□ 0.62
CDC27-208ENST00000532575 ABCC9O60706 1549 aa18.84■□□□□ 0.61
CDC27-208ENST00000532575 U3KPZ7 1027 aaPredicted RBP18.76■□□□□ 0.59
CDC27-208ENST00000532575 RNF39Q9H2S5 420 aa18.71■□□□□ 0.59
CDC27-208ENST00000532575 MYCNP04198 464 aaPredicted RBP18.7■□□□□ 0.58
CDC27-208ENST00000532575 CCDC180Q9P1Z9 1646 aa18.59■□□□□ 0.57
CDC27-208ENST00000532575 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.48■□□□□ 0.55
CDC27-208ENST00000532575 HNRNPUL2Q1KMD3 747 aaKnown RBP18.48■□□□□ 0.55
CDC27-208ENST00000532575 C1QBPQ07021 282 aaKnown RBP18.47■□□□□ 0.55
CDC27-208ENST00000532575 SAMD1Q6SPF0 538 aaPredicted RBP18.44■□□□□ 0.54
CDC27-208ENST00000532575 ATXN8OSP0DMR3 200 aa18.31■□□□□ 0.52
CDC27-208ENST00000532575 APLP2Q06481 763 aa18.27■□□□□ 0.52
CDC27-208ENST00000532575 ATF5Q9Y2D1 282 aaPredicted RBP18.24■□□□□ 0.51
CDC27-208ENST00000532575 SPINK5Q9NQ38 1064 aaPredicted RBP18.23■□□□□ 0.51
CDC27-208ENST00000532575 CACNB1Q02641 598 aaPredicted RBP18.18■□□□□ 0.5
CDC27-208ENST00000532575 CAPN15O75808 1086 aa18.13■□□□□ 0.49
CDC27-208ENST00000532575 TRHP20396 242 aaPredicted RBP18.06■□□□□ 0.48
CDC27-208ENST00000532575 ZNF219Q9P2Y4 722 aaPredicted RBP18.04■□□□□ 0.48
CDC27-208ENST00000532575 RB1CC1Q8TDY2 1594 aa17.86■□□□□ 0.45
CDC27-208ENST00000532575 DSG3P32926 999 aa17.83■□□□□ 0.44
CDC27-208ENST00000532575 ABCB7O75027 752 aa17.82■□□□□ 0.44
CDC27-208ENST00000532575 POLA2Q14181 598 aa17.78■□□□□ 0.44
CDC27-208ENST00000532575 NACADO15069 1562 aa17.7■□□□□ 0.42
CDC27-208ENST00000532575 DCAF8L2P0C7V8 631 aa17.64■□□□□ 0.41
CDC27-208ENST00000532575 PABPN1Q86U42 306 aaKnown RBP eCLIP17.54■□□□□ 0.4
CDC27-208ENST00000532575 ZBTB12Q9Y330 459 aaPredicted RBP17.45■□□□□ 0.38
CDC27-208ENST00000532575 MKRN4PQ13434 485 aaPredicted RBP17.44■□□□□ 0.38
CDC27-208ENST00000532575 FBLN2P98095 1184 aa17.42■□□□□ 0.38
CDC27-208ENST00000532575 MYO15BQ96JP2 1530 aa17.4■□□□□ 0.38
CDC27-208ENST00000532575 UNC13AQ9UPW8 1703 aa17.29■□□□□ 0.36
CDC27-208ENST00000532575 BICRAQ9NZM4 1560 aa17.28■□□□□ 0.36
CDC27-208ENST00000532575 OSCARQ8IYS5 282 aa17.19■□□□□ 0.34
CDC27-208ENST00000532575 SHROOM4Q9ULL8 1493 aa17.12■□□□□ 0.33
CDC27-208ENST00000532575 FKBP8Q14318 412 aa17.12■□□□□ 0.33
CDC27-208ENST00000532575 DCAF1Q9Y4B6 1507 aa17.08■□□□□ 0.32
CDC27-208ENST00000532575 ZCCHC6Q5VYS8 1495 aaKnown RBP17.06■□□□□ 0.32
CDC27-208ENST00000532575 SPDYE4A6NLX3 237 aa17.05■□□□□ 0.32
CDC27-208ENST00000532575 CECR2Q9BXF3 1484 aa17.02■□□□□ 0.32
CDC27-208ENST00000532575 SPDYE2BA6NHP3 402 aa17.01■□□□□ 0.31
CDC27-208ENST00000532575 SPDYE6P0CI01 402 aa17.01■□□□□ 0.31
CDC27-208ENST00000532575 SPDYE2Q495Y8 402 aa17.01■□□□□ 0.31
CDC27-208ENST00000532575 CC2D2AQ9P2K1 1620 aa16.98■□□□□ 0.31
CDC27-208ENST00000532575 RBM42Q9BTD8 480 aaKnown RBP16.95■□□□□ 0.3
CDC27-208ENST00000532575 ZNF692Q9BU19 519 aaPredicted RBP16.95■□□□□ 0.3
CDC27-208ENST00000532575 SCRIBQ14160 1630 aa16.92■□□□□ 0.3
CDC27-208ENST00000532575 EIF4G1Q04637 1599 aaKnown RBP16.9■□□□□ 0.3
CDC27-208ENST00000532575 SSUH2Q9Y2M2 353 aa16.9■□□□□ 0.3
CDC27-208ENST00000532575 PROM2Q8N271 834 aa16.79■□□□□ 0.28
CDC27-208ENST00000532575 AKT1S1Q96B36 256 aa16.77■□□□□ 0.28
CDC27-208ENST00000532575 DNAJC5Q9H3Z4 198 aa16.65■□□□□ 0.26
CDC27-208ENST00000532575 REM2Q8IYK8 340 aaPredicted RBP16.62■□□□□ 0.25
CDC27-208ENST00000532575 SPDYE1Q8NFV5 336 aaPredicted RBP16.49■□□□□ 0.23
CDC27-208ENST00000532575 FBXO3Q9UK99 471 aa16.46■□□□□ 0.23
CDC27-208ENST00000532575 PITPNM1O00562 1244 aa16.44■□□□□ 0.22
CDC27-208ENST00000532575 STAG3Q9UJ98 1225 aa16.44■□□□□ 0.22
CDC27-208ENST00000532575 CLEC11AQ9Y240 323 aa16.43■□□□□ 0.22
CDC27-208ENST00000532575 CUX2O14529 1486 aa16.37■□□□□ 0.21
CDC27-208ENST00000532575 NCAPD3P42695 1498 aa16.36■□□□□ 0.21
CDC27-208ENST00000532575 ERCC6Q03468 1493 aa16.33■□□□□ 0.2
CDC27-208ENST00000532575 PRR29P0C7W0 189 aa16.28■□□□□ 0.2
CDC27-208ENST00000532575 VASPP50552 380 aaPredicted RBP16.27■□□□□ 0.2
CDC27-208ENST00000532575 ATAD2BQ9ULI0 1458 aa16.26■□□□□ 0.19
CDC27-208ENST00000532575 CHRDL2Q6WN34 429 aa16.25■□□□□ 0.19
CDC27-208ENST00000532575 SMARCA2P51531 1590 aa16.21■□□□□ 0.18
CDC27-208ENST00000532575 HMGXB3Q12766 1538 aa16.18■□□□□ 0.18
CDC27-208ENST00000532575 MIER1Q8N108 512 aa16.14■□□□□ 0.17
CDC27-208ENST00000532575 PLCD3Q8N3E9 789 aa16.14■□□□□ 0.17
CDC27-208ENST00000532575 SMARCA4P51532 1647 aa16.13■□□□□ 0.17
CDC27-208ENST00000532575 FXR2P51116 673 aaKnown RBP eCLIP16.12■□□□□ 0.17
CDC27-208ENST00000532575 CREBZFQ9NS37 354 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms