RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 AEBP2Q6ZN18 517 aaPredicted RBP19.8■□□□□ 0.76
DDX42-211ENST00000580108 CHIC1Q5VXU3 224 aa18.8■□□□□ 0.6
DDX42-211ENST00000580108 SENP3Q9H4L4 574 aaPredicted RBP16.78■□□□□ 0.28
DDX42-211ENST00000580108 PHF23Q9BUL5 403 aaPredicted RBP16.61■□□□□ 0.25
DDX42-211ENST00000580108 FOXD1Q16676 465 aa15.7■□□□□ 0.1
DDX42-211ENST00000580108 PLPPR3Q6T4P5 718 aa15□□□□□ -0.01
DDX42-211ENST00000580108 PPP6R1Q9UPN7 881 aa14.75□□□□□ -0.05
DDX42-211ENST00000580108 ADRA2BP18089 450 aa14.69□□□□□ -0.06
DDX42-211ENST00000580108 PIAS4Q8N2W9 510 aaPredicted RBP14.64□□□□□ -0.07
DDX42-211ENST00000580108 MSH5O43196 834 aa14.59□□□□□ -0.07
DDX42-211ENST00000580108 POTEDQ86YR6 584 aa14.22□□□□□ -0.13
DDX42-211ENST00000580108 MAPK8IP2Q13387 824 aaPredicted RBP13.49□□□□□ -0.25
DDX42-211ENST00000580108 DMRT2Q9Y5R5 561 aa13.35□□□□□ -0.27
DDX42-211ENST00000580108 SCAF1Q9H7N4 1312 aaKnown RBP13.32□□□□□ -0.28
DDX42-211ENST00000580108 PPP4R3CPQ6ZMV5 832 aa13.18□□□□□ -0.3
DDX42-211ENST00000580108 CNKSR2Q8WXI2 1034 aa12.9□□□□□ -0.34
DDX42-211ENST00000580108 HOXD11P31277 338 aaPredicted RBP12.88□□□□□ -0.35
DDX42-211ENST00000580108 RNF216Q9NWF9 866 aaPredicted RBP12.78□□□□□ -0.36
DDX42-211ENST00000580108 DCAF8L1A6NGE4 600 aa12.76□□□□□ -0.37
DDX42-211ENST00000580108 NCBP3Q53F19 620 aaKnown RBP12.62□□□□□ -0.39
DDX42-211ENST00000580108 NPM3O75607 178 aaKnown RBP12.53□□□□□ -0.4
DDX42-211ENST00000580108 RNF39Q9H2S5 420 aa12.51□□□□□ -0.41
DDX42-211ENST00000580108 CACNB1Q02641 598 aaPredicted RBP12.5□□□□□ -0.41
DDX42-211ENST00000580108 DNAJC5BQ9UF47 199 aa12.38□□□□□ -0.43
DDX42-211ENST00000580108 KCNA4P22459 653 aa12.36□□□□□ -0.43
DDX42-211ENST00000580108 C1QBPQ07021 282 aaKnown RBP12.28□□□□□ -0.44
DDX42-211ENST00000580108 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.23□□□□□ -0.454e-8■■■□□ 15.3
DDX42-211ENST00000580108 U3KPZ7 1027 aaPredicted RBP12.05□□□□□ -0.48
DDX42-211ENST00000580108 SLC4A2P04920 1241 aa11.98□□□□□ -0.49
DDX42-211ENST00000580108 SPINK5Q9NQ38 1064 aaPredicted RBP11.86□□□□□ -0.51
DDX42-211ENST00000580108 CAPN15O75808 1086 aa11.78□□□□□ -0.52
DDX42-211ENST00000580108 DSG3P32926 999 aa11.74□□□□□ -0.53
DDX42-211ENST00000580108 SLC4A1APQ9BWU0 796 aaKnown RBP11.63□□□□□ -0.55
DDX42-211ENST00000580108 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.61□□□□□ -0.55
DDX42-211ENST00000580108 TRHP20396 242 aaPredicted RBP11.61□□□□□ -0.55
DDX42-211ENST00000580108 HNRNPUL2Q1KMD3 747 aaKnown RBP11.61□□□□□ -0.55
DDX42-211ENST00000580108 APLP2Q06481 763 aa11.58□□□□□ -0.56
DDX42-211ENST00000580108 SAMD1Q6SPF0 538 aaPredicted RBP11.57□□□□□ -0.56
DDX42-211ENST00000580108 ZNF219Q9P2Y4 722 aaPredicted RBP11.57□□□□□ -0.56
DDX42-211ENST00000580108 ABCB7O75027 752 aa11.55□□□□□ -0.56
DDX42-211ENST00000580108 MYCNP04198 464 aaPredicted RBP11.55□□□□□ -0.56
DDX42-211ENST00000580108 FOXD4L1Q9NU39 408 aa11.47□□□□□ -0.57
DDX42-211ENST00000580108 ZBTB22O15209 634 aa11.4□□□□□ -0.58
DDX42-211ENST00000580108 ATF5Q9Y2D1 282 aaPredicted RBP11.36□□□□□ -0.59
DDX42-211ENST00000580108 POLA2Q14181 598 aa11.31□□□□□ -0.6
DDX42-211ENST00000580108 POTEHQ6S545 545 aa11.13□□□□□ -0.63
DDX42-211ENST00000580108 RBM42Q9BTD8 480 aaKnown RBP11.11□□□□□ -0.63
DDX42-211ENST00000580108 ATXN8OSP0DMR3 200 aa11.09□□□□□ -0.63
DDX42-211ENST00000580108 ZBTB12Q9Y330 459 aaPredicted RBP11.03□□□□□ -0.64
DDX42-211ENST00000580108 OSCARQ8IYS5 282 aa10.98□□□□□ -0.65
DDX42-211ENST00000580108 AKT1S1Q96B36 256 aa10.91□□□□□ -0.66
DDX42-211ENST00000580108 CHRDL2Q6WN34 429 aa10.9□□□□□ -0.66
DDX42-211ENST00000580108 CSRNP3Q8WYN3 585 aa10.89□□□□□ -0.67
DDX42-211ENST00000580108 MKRN4PQ13434 485 aaPredicted RBP10.84□□□□□ -0.67
DDX42-211ENST00000580108 REM2Q8IYK8 340 aaPredicted RBP10.84□□□□□ -0.67
DDX42-211ENST00000580108 FBLN2P98095 1184 aa10.79□□□□□ -0.68
DDX42-211ENST00000580108 EHMT2Q96KQ7 1210 aa10.76□□□□□ -0.69
DDX42-211ENST00000580108 PITPNM1O00562 1244 aa10.74□□□□□ -0.69
DDX42-211ENST00000580108 SPDYE2BA6NHP3 402 aa10.73□□□□□ -0.69
DDX42-211ENST00000580108 SPDYE6P0CI01 402 aa10.73□□□□□ -0.69
DDX42-211ENST00000580108 SPDYE2Q495Y8 402 aa10.73□□□□□ -0.69
DDX42-211ENST00000580108 PIP4P2Q8N4L2 257 aa10.68□□□□□ -0.7
DDX42-211ENST00000580108 SSUH2Q9Y2M2 353 aa10.64□□□□□ -0.71
DDX42-211ENST00000580108 FXR2P51116 673 aaKnown RBP eCLIP10.62□□□□□ -0.71
DDX42-211ENST00000580108 ZNF692Q9BU19 519 aaPredicted RBP10.61□□□□□ -0.71
DDX42-211ENST00000580108 SPDYE1Q8NFV5 336 aaPredicted RBP10.52□□□□□ -0.73
DDX42-211ENST00000580108 CLEC11AQ9Y240 323 aa10.51□□□□□ -0.73
DDX42-211ENST00000580108 PABPN1Q86U42 306 aaKnown RBP eCLIP10.48□□□□□ -0.73
DDX42-211ENST00000580108 SP7Q8TDD2 431 aaPredicted RBP10.45□□□□□ -0.74
DDX42-211ENST00000580108 HAX1O00165 279 aa10.43□□□□□ -0.74
DDX42-211ENST00000580108 PRKAR2AP13861 404 aaKnown RBP10.43□□□□□ -0.74
DDX42-211ENST00000580108 EVX2Q03828 476 aa10.39□□□□□ -0.75
DDX42-211ENST00000580108 CHADLQ6NUI6 762 aa10.36□□□□□ -0.75
DDX42-211ENST00000580108 PRR29P0C7W0 189 aa10.33□□□□□ -0.76
DDX42-211ENST00000580108 SPDYE4A6NLX3 237 aa10.29□□□□□ -0.76
DDX42-211ENST00000580108 C19orf67A6NJJ6 358 aa10.28□□□□□ -0.76
DDX42-211ENST00000580108 FARP1Q9Y4F1 1045 aaPredicted RBP10.18□□□□□ -0.78
DDX42-211ENST00000580108 CREBZFQ9NS37 354 aa10.16□□□□□ -0.78
DDX42-211ENST00000580108 STAG3Q9UJ98 1225 aa10.14□□□□□ -0.79
DDX42-211ENST00000580108 GABBR2O75899 941 aa10.11□□□□□ -0.79
DDX42-211ENST00000580108 CD44P16070 742 aaKnown RBP10.11□□□□□ -0.79
DDX42-211ENST00000580108 PROM2Q8N271 834 aa10.09□□□□□ -0.79
DDX42-211ENST00000580108 MNX1P50219 401 aaPredicted RBP10□□□□□ -0.81
DDX42-211ENST00000580108 ZNF579Q8NAF0 562 aaKnown RBP9.96□□□□□ -0.82
DDX42-211ENST00000580108 ZRANB1Q9UGI0 708 aa9.96□□□□□ -0.82
DDX42-211ENST00000580108 POTEIP0CG38 1075 aa9.95□□□□□ -0.82
DDX42-211ENST00000580108 NPM1P06748 294 aaKnown RBP eCLIP9.89□□□□□ -0.83
DDX42-211ENST00000580108 PHF12Q96QT6 1004 aa9.88□□□□□ -0.83
DDX42-211ENST00000580108 CLCN6P51797 869 aa9.87□□□□□ -0.83
DDX42-211ENST00000580108 GALR2O43603 387 aaPredicted RBP9.86□□□□□ -0.83
DDX42-211ENST00000580108 NISCHQ9Y2I1 1504 aa9.86□□□□□ -0.83
DDX42-211ENST00000580108 FKBP8Q14318 412 aa9.84□□□□□ -0.83
DDX42-211ENST00000580108 PAK3O75914 559 aaPredicted RBP9.83□□□□□ -0.84
DDX42-211ENST00000580108 LHX8Q68G74 356 aa9.8□□□□□ -0.84
DDX42-211ENST00000580108 DCBLD2Q96PD2 775 aa9.79□□□□□ -0.84
DDX42-211ENST00000580108 MIER1Q8N108 512 aa9.77□□□□□ -0.85
DDX42-211ENST00000580108 TSPYL2Q9H2G4 693 aaPredicted RBP9.76□□□□□ -0.85
DDX42-211ENST00000580108 MS4A3Q96HJ5 214 aa9.74□□□□□ -0.85
DDX42-211ENST00000580108 CCDC61Q9Y6R9 512 aa9.74□□□□□ -0.85
DDX42-211ENST00000580108 RASEFQ8IZ41 740 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms