RNA–Protein interactions for RNA: ENST00000527547.5

CDC27-204, Transcript of cell division cycle 27, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC27, Length 2,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-204ENST00000527547 NISCHQ9Y2I1 1504 aa21.11■□□□□ 0.97
CDC27-204ENST00000527547 CCDC180Q9P1Z9 1646 aa18.4■□□□□ 0.54
CDC27-204ENST00000527547 ZCCHC6Q5VYS8 1495 aaKnown RBP17.69■□□□□ 0.42
CDC27-204ENST00000527547 ABCC9O60706 1549 aa17.68■□□□□ 0.42
CDC27-204ENST00000527547 DCAF8L2P0C7V8 631 aa17.62■□□□□ 0.41
CDC27-204ENST00000527547 DCAF1Q9Y4B6 1507 aa17.37■□□□□ 0.37
CDC27-204ENST00000527547 SHROOM4Q9ULL8 1493 aa17.27■□□□□ 0.36
CDC27-204ENST00000527547 MYO15BQ96JP2 1530 aa17.2■□□□□ 0.34
CDC27-204ENST00000527547 NACADO15069 1562 aa17.18■□□□□ 0.34
CDC27-204ENST00000527547 RB1CC1Q8TDY2 1594 aa17.09■□□□□ 0.33
CDC27-204ENST00000527547 SCRIBQ14160 1630 aa17.03■□□□□ 0.32
CDC27-204ENST00000527547 UNC13AQ9UPW8 1703 aa16.79■□□□□ 0.28
CDC27-204ENST00000527547 PABPN1Q86U42 306 aaKnown RBP eCLIP16.69■□□□□ 0.26
CDC27-204ENST00000527547 BICRAQ9NZM4 1560 aa16.63■□□□□ 0.25
CDC27-204ENST00000527547 SUPT5HO00267 1087 aaKnown RBP16.53■□□□□ 0.24
CDC27-204ENST00000527547 CECR2Q9BXF3 1484 aa16.49■□□□□ 0.23
CDC27-204ENST00000527547 RSF1Q96T23 1441 aaPredicted RBP16.35■□□□□ 0.21
CDC27-204ENST00000527547 MROH2BQ7Z745 1585 aa16.35■□□□□ 0.21
CDC27-204ENST00000527547 BAZ1AQ9NRL2 1556 aaPredicted RBP16.29■□□□□ 0.2
CDC27-204ENST00000527547 SMARCA4P51532 1647 aa16.25■□□□□ 0.19
CDC27-204ENST00000527547 WIZO95785 1651 aa16.21■□□□□ 0.19
CDC27-204ENST00000527547 EIF4G1Q04637 1599 aaKnown RBP16.13■□□□□ 0.17
CDC27-204ENST00000527547 ATAD2BQ9ULI0 1458 aa16.03■□□□□ 0.16
CDC27-204ENST00000527547 PEG3Q9GZU2 1588 aa16.01■□□□□ 0.15
CDC27-204ENST00000527547 TOP2AP11388 1531 aaKnown RBP15.98■□□□□ 0.15
CDC27-204ENST00000527547 SMARCA2P51531 1590 aa15.97■□□□□ 0.15
CDC27-204ENST00000527547 CC2D2AQ9P2K1 1620 aa15.94■□□□□ 0.14
CDC27-204ENST00000527547 BAZ1BQ9UIG0 1483 aaKnown RBP15.94■□□□□ 0.14
CDC27-204ENST00000527547 NCAPD3P42695 1498 aa15.88■□□□□ 0.13
CDC27-204ENST00000527547 CCDC88BA6NC98 1476 aa15.86■□□□□ 0.13
CDC27-204ENST00000527547 HMGXB3Q12766 1538 aa15.83■□□□□ 0.13
CDC27-204ENST00000527547 DNAJC5BQ9UF47 199 aa15.77■□□□□ 0.11
CDC27-204ENST00000527547 CHIC1Q5VXU3 224 aa15.7■□□□□ 0.1
CDC27-204ENST00000527547 ABCC8Q09428 1581 aa15.53■□□□□ 0.08
CDC27-204ENST00000527547 CFTRP13569 1480 aa15.51■□□□□ 0.07
CDC27-204ENST00000527547 CADPSQ9ULU8 1353 aa15.5■□□□□ 0.07
CDC27-204ENST00000527547 TRIM41Q8WV44 630 aa15.49■□□□□ 0.07
CDC27-204ENST00000527547 NESP48681 1621 aa15.49■□□□□ 0.07
CDC27-204ENST00000527547 WRNQ14191 1432 aaPredicted RBP eCLIP15.39■□□□□ 0.05
CDC27-204ENST00000527547 PRDM2Q13029 1718 aa15.37■□□□□ 0.05
CDC27-204ENST00000527547 LAMC3Q9Y6N6 1575 aa15.36■□□□□ 0.05
CDC27-204ENST00000527547 SYNJ1O43426 1573 aa15.35■□□□□ 0.05
CDC27-204ENST00000527547 FANCD2Q9BXW9 1451 aa15.34■□□□□ 0.05
CDC27-204ENST00000527547 FAM9AQ8IZU1 332 aaPredicted RBP15.3■□□□□ 0.04
CDC27-204ENST00000527547 CUX1P39880 1505 aa15.28■□□□□ 0.04
CDC27-204ENST00000527547 PDS5BQ9NTI5 1447 aa15.26■□□□□ 0.03
CDC27-204ENST00000527547 KIF21AQ7Z4S6 1674 aa15.25■□□□□ 0.03
CDC27-204ENST00000527547 TOP2BQ02880 1626 aa15.25■□□□□ 0.03
CDC27-204ENST00000527547 CEP164Q9UPV0 1460 aa15.24■□□□□ 0.03
CDC27-204ENST00000527547 BIVM-ERCC5R4GMW8 1640 aa15.23■□□□□ 0.03
CDC27-204ENST00000527547 SOGA1O94964 1423 aa15.2■□□□□ 0.02
CDC27-204ENST00000527547 RUSC2Q8N2Y8 1516 aa15.18■□□□□ 0.02
CDC27-204ENST00000527547 URB2Q14146 1524 aaKnown RBP15.17■□□□□ 0.02
CDC27-204ENST00000527547 LOC105371045A0A1W2PR82 267 aa15.16■□□□□ 0.02
CDC27-204ENST00000527547 EHMT2Q96KQ7 1210 aa15.16■□□□□ 0.02
CDC27-204ENST00000527547 TOPBP1Q92547 1522 aa15.16■□□□□ 0.02
CDC27-204ENST00000527547 DNMBPQ6XZF7 1577 aa15.14■□□□□ 0.01
CDC27-204ENST00000527547 FGD5Q6ZNL6 1462 aa15.14■□□□□ 0.01
CDC27-204ENST00000527547 ERCC6Q03468 1493 aa15.13■□□□□ 0.01
CDC27-204ENST00000527547 POLA1P09884 1462 aaPredicted RBP15.08■□□□□ 0.01
CDC27-204ENST00000527547 MRC2Q9UBG0 1479 aa15.08■□□□□ 0.01
CDC27-204ENST00000527547 RAD54L2Q9Y4B4 1467 aa15.07■□□□□ 0
CDC27-204ENST00000527547 CSRNP3Q8WYN3 585 aa15.03■□□□□ -0
CDC27-204ENST00000527547 CUX2O14529 1486 aa15.02□□□□□ -0.01
CDC27-204ENST00000527547 EEA1Q15075 1411 aa15.01□□□□□ -0.01
CDC27-204ENST00000527547 THOC2Q8NI27 1593 aaKnown RBP15.01□□□□□ -0.01
CDC27-204ENST00000527547 WDR62O43379 1518 aa15□□□□□ -0.01
CDC27-204ENST00000527547 KIF27Q86VH2 1401 aa14.98□□□□□ -0.01
CDC27-204ENST00000527547 ABCA10Q8WWZ4 1543 aa14.96□□□□□ -0.01
CDC27-204ENST00000527547 TDRD9Q8NDG6 1382 aaKnown RBP14.94□□□□□ -0.02
CDC27-204ENST00000527547 TARBP1Q13395 1621 aaKnown RBP14.93□□□□□ -0.02
CDC27-204ENST00000527547 WDR97A6NE52 1622 aa14.92□□□□□ -0.02
CDC27-204ENST00000527547 IGF1RP08069 1367 aa14.9□□□□□ -0.02
CDC27-204ENST00000527547 RAPGEF2Q9Y4G8 1499 aa14.88□□□□□ -0.03
CDC27-204ENST00000527547 ZNF608Q9ULD9 1512 aaPredicted RBP14.87□□□□□ -0.03
CDC27-204ENST00000527547 UBTFP17480 764 aaKnown RBP14.87□□□□□ -0.03
CDC27-204ENST00000527547 AQRO60306 1485 aaKnown RBP eCLIP14.87□□□□□ -0.031e-7■■■■□ 23.9
CDC27-204ENST00000527547 IFT140Q96RY7 1462 aa14.86□□□□□ -0.03
CDC27-204ENST00000527547 KIF21BO75037 1637 aa14.86□□□□□ -0.03
CDC27-204ENST00000527547 GOLGA3Q08378 1498 aa14.86□□□□□ -0.03
CDC27-204ENST00000527547 ABCA5Q8WWZ7 1642 aa14.85□□□□□ -0.03
CDC27-204ENST00000527547 GAPVD1Q14C86 1478 aa14.85□□□□□ -0.03
CDC27-204ENST00000527547 PRXQ9BXM0 1461 aa14.85□□□□□ -0.03
CDC27-204ENST00000527547 CARMIL1Q5VZK9 1371 aa14.82□□□□□ -0.04
CDC27-204ENST00000527547 TNIKQ9UKE5 1360 aa14.78□□□□□ -0.04
CDC27-204ENST00000527547 RANGAP1P46060 587 aaPredicted RBP14.78□□□□□ -0.04
CDC27-204ENST00000527547 ERICH3Q5RHP9 1530 aa14.77□□□□□ -0.04
CDC27-204ENST00000527547 EIF4G3O43432 1585 aaKnown RBP14.77□□□□□ -0.04
CDC27-204ENST00000527547 PBRM1Q86U86 1689 aa14.77□□□□□ -0.05
CDC27-204ENST00000527547 GRIN2BQ13224 1484 aa14.74□□□□□ -0.05
CDC27-204ENST00000527547 CUL7Q14999 1698 aa14.73□□□□□ -0.05
CDC27-204ENST00000527547 CEP162Q5TB80 1403 aa14.73□□□□□ -0.05
CDC27-204ENST00000527547 SNAPC4Q5SXM2 1469 aa14.7□□□□□ -0.06
CDC27-204ENST00000527547 ADAMTS12P58397 1594 aa14.68□□□□□ -0.06
CDC27-204ENST00000527547 FHAD1B1AJZ9 1412 aa14.67□□□□□ -0.06
CDC27-204ENST00000527547 CLIP1P30622 1438 aa14.64□□□□□ -0.07
CDC27-204ENST00000527547 FBLN2P98095 1184 aa14.63□□□□□ -0.07
CDC27-204ENST00000527547 MAGI1Q96QZ7 1491 aaPredicted RBP14.61□□□□□ -0.07
CDC27-204ENST00000527547 CHMP7Q8WUX9 453 aaPredicted RBP14.6□□□□□ -0.07
CDC27-204ENST00000527547 CTTNBP2Q8WZ74 1663 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 156.7 ms