RNA–Protein interactions for RNA: ENST00000418849.1

CMC1-203, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-203ENST00000418849 AEBP2Q6ZN18 517 aaPredicted RBP23.23■■□□□ 1.31
CMC1-203ENST00000418849 CHIC1Q5VXU3 224 aa21.74■■□□□ 1.07
CMC1-203ENST00000418849 SENP3Q9H4L4 574 aaPredicted RBP20■□□□□ 0.79
CMC1-203ENST00000418849 PHF23Q9BUL5 403 aaPredicted RBP19.58■□□□□ 0.72
CMC1-203ENST00000418849 POTEDQ86YR6 584 aa18.82■□□□□ 0.6
CMC1-203ENST00000418849 FOXD1Q16676 465 aa18.7■□□□□ 0.58
CMC1-203ENST00000418849 MSH5O43196 834 aa17.87■□□□□ 0.45
CMC1-203ENST00000418849 PIAS4Q8N2W9 510 aaPredicted RBP17.27■□□□□ 0.36
CMC1-203ENST00000418849 PPP6R1Q9UPN7 881 aa16.82■□□□□ 0.28
CMC1-203ENST00000418849 PLPPR3Q6T4P5 718 aa16.74■□□□□ 0.27
CMC1-203ENST00000418849 ADRA2BP18089 450 aa16.71■□□□□ 0.27
CMC1-203ENST00000418849 CACNB1Q02641 598 aaPredicted RBP15.8■□□□□ 0.12
CMC1-203ENST00000418849 DMRT2Q9Y5R5 561 aa15.72■□□□□ 0.11
CMC1-203ENST00000418849 MAPK8IP2Q13387 824 aaPredicted RBP15.59■□□□□ 0.09
CMC1-203ENST00000418849 SCAF1Q9H7N4 1312 aaKnown RBP15.37■□□□□ 0.05
CMC1-203ENST00000418849 RNF39Q9H2S5 420 aa15.16■□□□□ 0.02
CMC1-203ENST00000418849 DCAF8L1A6NGE4 600 aa15.04■□□□□ -0
CMC1-203ENST00000418849 C1QBPQ07021 282 aaKnown RBP14.9□□□□□ -0.02
CMC1-203ENST00000418849 HOXD11P31277 338 aaPredicted RBP14.83□□□□□ -0.04
CMC1-203ENST00000418849 PPP4R3CPQ6ZMV5 832 aa14.63□□□□□ -0.07
CMC1-203ENST00000418849 POTEHQ6S545 545 aa14.59□□□□□ -0.07
CMC1-203ENST00000418849 DNAJC5BQ9UF47 199 aa14.55□□□□□ -0.08
CMC1-203ENST00000418849 RNF216Q9NWF9 866 aaPredicted RBP14.48□□□□□ -0.09
CMC1-203ENST00000418849 CNKSR2Q8WXI2 1034 aa14.4□□□□□ -0.1
CMC1-203ENST00000418849 NCBP3Q53F19 620 aaKnown RBP14.28□□□□□ -0.12
CMC1-203ENST00000418849 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.08□□□□□ -0.161e-6■■■□□ 18.6
CMC1-203ENST00000418849 NPM3O75607 178 aaKnown RBP13.9□□□□□ -0.18
CMC1-203ENST00000418849 DSG3P32926 999 aa13.89□□□□□ -0.19
CMC1-203ENST00000418849 KCNA4P22459 653 aa13.8□□□□□ -0.2
CMC1-203ENST00000418849 CAPN15O75808 1086 aa13.75□□□□□ -0.21
CMC1-203ENST00000418849 SPINK5Q9NQ38 1064 aaPredicted RBP13.72□□□□□ -0.21
CMC1-203ENST00000418849 U3KPZ7 1027 aaPredicted RBP13.7□□□□□ -0.22
CMC1-203ENST00000418849 ABCB7O75027 752 aa13.33□□□□□ -0.28
CMC1-203ENST00000418849 CHRDL2Q6WN34 429 aa13.33□□□□□ -0.28
CMC1-203ENST00000418849 TRHP20396 242 aaPredicted RBP13.32□□□□□ -0.28
CMC1-203ENST00000418849 RBM42Q9BTD8 480 aaKnown RBP13.32□□□□□ -0.28
CMC1-203ENST00000418849 ZNF219Q9P2Y4 722 aaPredicted RBP13.32□□□□□ -0.28
CMC1-203ENST00000418849 SP7Q8TDD2 431 aaPredicted RBP13.29□□□□□ -0.28
CMC1-203ENST00000418849 APLP2Q06481 763 aa13.28□□□□□ -0.28
CMC1-203ENST00000418849 SLC4A2P04920 1241 aa13.16□□□□□ -0.3
CMC1-203ENST00000418849 SLC4A1APQ9BWU0 796 aaKnown RBP13.16□□□□□ -0.3
CMC1-203ENST00000418849 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.13□□□□□ -0.31
CMC1-203ENST00000418849 HNRNPUL2Q1KMD3 747 aaKnown RBP13.13□□□□□ -0.31
CMC1-203ENST00000418849 SAMD1Q6SPF0 538 aaPredicted RBP13.02□□□□□ -0.33
CMC1-203ENST00000418849 MYCNP04198 464 aaPredicted RBP12.96□□□□□ -0.33
CMC1-203ENST00000418849 FOXD4L1Q9NU39 408 aa12.92□□□□□ -0.34
CMC1-203ENST00000418849 PIP4P2Q8N4L2 257 aa12.82□□□□□ -0.36
CMC1-203ENST00000418849 AKT1S1Q96B36 256 aa12.82□□□□□ -0.36
CMC1-203ENST00000418849 HAX1O00165 279 aa12.8□□□□□ -0.36
CMC1-203ENST00000418849 POLA2Q14181 598 aa12.79□□□□□ -0.36
CMC1-203ENST00000418849 REM2Q8IYK8 340 aaPredicted RBP12.68□□□□□ -0.38
CMC1-203ENST00000418849 ZBTB22O15209 634 aa12.62□□□□□ -0.39
CMC1-203ENST00000418849 FXR2P51116 673 aaKnown RBP eCLIP12.62□□□□□ -0.39
CMC1-203ENST00000418849 ATXN8OSP0DMR3 200 aa12.56□□□□□ -0.4
CMC1-203ENST00000418849 EVX2Q03828 476 aa12.56□□□□□ -0.4
CMC1-203ENST00000418849 PITPNM1O00562 1244 aa12.55□□□□□ -0.4
CMC1-203ENST00000418849 ZBTB12Q9Y330 459 aaPredicted RBP12.52□□□□□ -0.41
CMC1-203ENST00000418849 LHX8Q68G74 356 aa12.44□□□□□ -0.42
CMC1-203ENST00000418849 ATF5Q9Y2D1 282 aaPredicted RBP12.44□□□□□ -0.42
CMC1-203ENST00000418849 OSCARQ8IYS5 282 aa12.4□□□□□ -0.42
CMC1-203ENST00000418849 PLSCR2Q9NRY7 297 aa12.32□□□□□ -0.44
CMC1-203ENST00000418849 EHMT2Q96KQ7 1210 aa12.3□□□□□ -0.44
CMC1-203ENST00000418849 CSRNP3Q8WYN3 585 aa12.28□□□□□ -0.44
CMC1-203ENST00000418849 GABBR2O75899 941 aa12.27□□□□□ -0.45
CMC1-203ENST00000418849 C19orf67A6NJJ6 358 aa12.26□□□□□ -0.45
CMC1-203ENST00000418849 PRKAR2AP13861 404 aaKnown RBP12.2□□□□□ -0.46
CMC1-203ENST00000418849 FBLN2P98095 1184 aa12.2□□□□□ -0.46
CMC1-203ENST00000418849 SPDYE2BA6NHP3 402 aa12.05□□□□□ -0.48
CMC1-203ENST00000418849 SPDYE6P0CI01 402 aa12.05□□□□□ -0.48
CMC1-203ENST00000418849 SPDYE2Q495Y8 402 aa12.05□□□□□ -0.48
CMC1-203ENST00000418849 SPDYE1Q8NFV5 336 aaPredicted RBP12.04□□□□□ -0.48
CMC1-203ENST00000418849 CLEC11AQ9Y240 323 aa12□□□□□ -0.49
CMC1-203ENST00000418849 POTEIP0CG38 1075 aa11.99□□□□□ -0.49
CMC1-203ENST00000418849 MKRN4PQ13434 485 aaPredicted RBP11.91□□□□□ -0.5
CMC1-203ENST00000418849 CLCN6P51797 869 aa11.87□□□□□ -0.51
CMC1-203ENST00000418849 CHADLQ6NUI6 762 aa11.85□□□□□ -0.51
CMC1-203ENST00000418849 ZNF692Q9BU19 519 aaPredicted RBP11.85□□□□□ -0.51
CMC1-203ENST00000418849 SSUH2Q9Y2M2 353 aa11.8□□□□□ -0.52
CMC1-203ENST00000418849 CD44P16070 742 aaKnown RBP11.77□□□□□ -0.53
CMC1-203ENST00000418849 DCBLD2Q96PD2 775 aa11.76□□□□□ -0.53
CMC1-203ENST00000418849 POTEMA6NI47 508 aa11.75□□□□□ -0.53
CMC1-203ENST00000418849 PRR29P0C7W0 189 aa11.71□□□□□ -0.53
CMC1-203ENST00000418849 OTUD5Q96G74 571 aa11.71□□□□□ -0.53
CMC1-203ENST00000418849 POTEGQ6S5H5 508 aa11.69□□□□□ -0.54
CMC1-203ENST00000418849 PCDH10Q9P2E7 1040 aa11.68□□□□□ -0.54
CMC1-203ENST00000418849 PABPN1Q86U42 306 aaKnown RBP eCLIP11.65□□□□□ -0.54
CMC1-203ENST00000418849 FARP1Q9Y4F1 1045 aaPredicted RBP11.65□□□□□ -0.54
CMC1-203ENST00000418849 SPDYE4A6NLX3 237 aa11.59□□□□□ -0.55
CMC1-203ENST00000418849 ZNF579Q8NAF0 562 aaKnown RBP11.58□□□□□ -0.56
CMC1-203ENST00000418849 POTEB2H3BUK9 544 aa11.56□□□□□ -0.56
CMC1-203ENST00000418849 STAG3Q9UJ98 1225 aa11.52□□□□□ -0.57
CMC1-203ENST00000418849 ZRANB1Q9UGI0 708 aa11.47□□□□□ -0.57
CMC1-203ENST00000418849 GALR2O43603 387 aaPredicted RBP11.46□□□□□ -0.57
CMC1-203ENST00000418849 LCE2DQ5TA82 110 aaPredicted RBP11.34□□□□□ -0.59
CMC1-203ENST00000418849 PELP1Q8IZL8 1130 aaKnown RBP11.31□□□□□ -0.6
CMC1-203ENST00000418849 MAMSTRQ6ZN01 415 aa11.3□□□□□ -0.6
CMC1-203ENST00000418849 PROM2Q8N271 834 aa11.3□□□□□ -0.6
CMC1-203ENST00000418849 POTEJP0CG39 1038 aa11.26□□□□□ -0.61
CMC1-203ENST00000418849 METRNQ9UJH8 293 aa11.25□□□□□ -0.61
CMC1-203ENST00000418849 FAM163AQ96GL9 167 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms