RNA–Protein interactions for RNA: ENST00000525495.6

CDC27-202, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 1,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-202ENST00000525495 NISCHQ9Y2I1 1504 aa29.1■■■□□ 2.25
CDC27-202ENST00000525495 AEBP2Q6ZN18 517 aaPredicted RBP26.68■■□□□ 1.86
CDC27-202ENST00000525495 CCDC180Q9P1Z9 1646 aa25.92■■□□□ 1.74
CDC27-202ENST00000525495 ABCC9O60706 1549 aa25.47■■□□□ 1.67
CDC27-202ENST00000525495 CHIC1Q5VXU3 224 aa25.11■■□□□ 1.61
CDC27-202ENST00000525495 RB1CC1Q8TDY2 1594 aa24.42■■□□□ 1.5
CDC27-202ENST00000525495 NACADO15069 1562 aa24.37■■□□□ 1.49
CDC27-202ENST00000525495 DCAF8L2P0C7V8 631 aa24.33■■□□□ 1.49
CDC27-202ENST00000525495 ZCCHC6Q5VYS8 1495 aaKnown RBP24.22■■□□□ 1.47
CDC27-202ENST00000525495 MYO15BQ96JP2 1530 aa24.17■■□□□ 1.46
CDC27-202ENST00000525495 DCAF1Q9Y4B6 1507 aa24.05■■□□□ 1.44
CDC27-202ENST00000525495 UNC13AQ9UPW8 1703 aa23.96■■□□□ 1.43
CDC27-202ENST00000525495 PABPN1Q86U42 306 aaKnown RBP eCLIP23.78■■□□□ 1.4
CDC27-202ENST00000525495 BICRAQ9NZM4 1560 aa23.74■■□□□ 1.39
CDC27-202ENST00000525495 SCRIBQ14160 1630 aa23.67■■□□□ 1.38
CDC27-202ENST00000525495 DNAJC5BQ9UF47 199 aa23.49■■□□□ 1.35
CDC27-202ENST00000525495 SHROOM4Q9ULL8 1493 aa23.39■■□□□ 1.34
CDC27-202ENST00000525495 EIF4G1Q04637 1599 aaKnown RBP23.1■■□□□ 1.29
CDC27-202ENST00000525495 CC2D2AQ9P2K1 1620 aa23.04■■□□□ 1.28
CDC27-202ENST00000525495 CECR2Q9BXF3 1484 aa22.87■■□□□ 1.25
CDC27-202ENST00000525495 SENP3Q9H4L4 574 aaPredicted RBP22.85■■□□□ 1.25
CDC27-202ENST00000525495 SMARCA4P51532 1647 aa22.62■■□□□ 1.21
CDC27-202ENST00000525495 BAZ1AQ9NRL2 1556 aaPredicted RBP22.55■■□□□ 1.2
CDC27-202ENST00000525495 ATAD2BQ9ULI0 1458 aa22.51■■□□□ 1.19
CDC27-202ENST00000525495 NCAPD3P42695 1498 aa22.48■■□□□ 1.19
CDC27-202ENST00000525495 PHF23Q9BUL5 403 aaPredicted RBP22.48■■□□□ 1.19
CDC27-202ENST00000525495 MROH2BQ7Z745 1585 aa22.46■■□□□ 1.19
CDC27-202ENST00000525495 SMARCA2P51531 1590 aa22.45■■□□□ 1.18
CDC27-202ENST00000525495 PEG3Q9GZU2 1588 aa22.39■■□□□ 1.17
CDC27-202ENST00000525495 HMGXB3Q12766 1538 aa22.37■■□□□ 1.17
CDC27-202ENST00000525495 BAZ1BQ9UIG0 1483 aaKnown RBP22.3■■□□□ 1.16
CDC27-202ENST00000525495 WIZO95785 1651 aa22.22■■□□□ 1.15
CDC27-202ENST00000525495 RSF1Q96T23 1441 aaPredicted RBP22.14■■□□□ 1.14
CDC27-202ENST00000525495 NESP48681 1621 aa22.04■■□□□ 1.12
CDC27-202ENST00000525495 TOP2AP11388 1531 aaKnown RBP21.93■■□□□ 1.1
CDC27-202ENST00000525495 LAMC3Q9Y6N6 1575 aa21.92■■□□□ 1.1
CDC27-202ENST00000525495 ERCC6Q03468 1493 aa21.92■■□□□ 1.1
CDC27-202ENST00000525495 CADPSQ9ULU8 1353 aa21.83■■□□□ 1.08
CDC27-202ENST00000525495 KIF21AQ7Z4S6 1674 aa21.78■■□□□ 1.08
CDC27-202ENST00000525495 PDS5BQ9NTI5 1447 aa21.74■■□□□ 1.07
CDC27-202ENST00000525495 CUX2O14529 1486 aa21.71■■□□□ 1.07
CDC27-202ENST00000525495 THOC2Q8NI27 1593 aaKnown RBP21.71■■□□□ 1.07
CDC27-202ENST00000525495 CCDC88BA6NC98 1476 aa21.69■■□□□ 1.06
CDC27-202ENST00000525495 CFTRP13569 1480 aa21.69■■□□□ 1.06
CDC27-202ENST00000525495 FANCD2Q9BXW9 1451 aa21.59■■□□□ 1.05
CDC27-202ENST00000525495 CEP164Q9UPV0 1460 aa21.56■■□□□ 1.04
CDC27-202ENST00000525495 PRDM2Q13029 1718 aa21.55■■□□□ 1.04
CDC27-202ENST00000525495 MRC2Q9UBG0 1479 aa21.55■■□□□ 1.04
CDC27-202ENST00000525495 WDR62O43379 1518 aa21.5■■□□□ 1.03
CDC27-202ENST00000525495 SUPT5HO00267 1087 aaKnown RBP21.49■■□□□ 1.03
CDC27-202ENST00000525495 URB2Q14146 1524 aaKnown RBP21.41■■□□□ 1.02
CDC27-202ENST00000525495 FOXD1Q16676 465 aa21.29■■□□□ 1
CDC27-202ENST00000525495 TOPBP1Q92547 1522 aa21.25■□□□□ 0.99
CDC27-202ENST00000525495 DNMBPQ6XZF7 1577 aa21.2■□□□□ 0.98
CDC27-202ENST00000525495 ABCC8Q09428 1581 aa21.17■□□□□ 0.98
CDC27-202ENST00000525495 DNAJC5Q9H3Z4 198 aa21.17■□□□□ 0.98
CDC27-202ENST00000525495 IFT140Q96RY7 1462 aa21.1■□□□□ 0.97
CDC27-202ENST00000525495 ZNF608Q9ULD9 1512 aaPredicted RBP21.07■□□□□ 0.96
CDC27-202ENST00000525495 CUX1P39880 1505 aa21.07■□□□□ 0.96
CDC27-202ENST00000525495 POLA1P09884 1462 aaPredicted RBP21.06■□□□□ 0.96
CDC27-202ENST00000525495 TARBP1Q13395 1621 aaKnown RBP21.05■□□□□ 0.96
CDC27-202ENST00000525495 FGD5Q6ZNL6 1462 aa21■□□□□ 0.95
CDC27-202ENST00000525495 RAD54L2Q9Y4B4 1467 aa20.98■□□□□ 0.95
CDC27-202ENST00000525495 EIF4G3O43432 1585 aaKnown RBP20.98■□□□□ 0.95
CDC27-202ENST00000525495 SOGA1O94964 1423 aa20.94■□□□□ 0.94
CDC27-202ENST00000525495 AQRO60306 1485 aaKnown RBP eCLIP20.92■□□□□ 0.947e-9■■■■■ 34.8
CDC27-202ENST00000525495 TDRD9Q8NDG6 1382 aaKnown RBP20.86■□□□□ 0.93
CDC27-202ENST00000525495 SYNJ1O43426 1573 aa20.86■□□□□ 0.93
CDC27-202ENST00000525495 WRNQ14191 1432 aaPredicted RBP eCLIP20.86■□□□□ 0.93
CDC27-202ENST00000525495 WDR97A6NE52 1622 aa20.86■□□□□ 0.93
CDC27-202ENST00000525495 BIVM-ERCC5R4GMW8 1640 aa20.86■□□□□ 0.93
CDC27-202ENST00000525495 TOP2BQ02880 1626 aa20.84■□□□□ 0.93
CDC27-202ENST00000525495 OSCARQ8IYS5 282 aa20.79■□□□□ 0.92
CDC27-202ENST00000525495 ABCA10Q8WWZ4 1543 aa20.77■□□□□ 0.92
CDC27-202ENST00000525495 CHD1O14646 1710 aa20.75■□□□□ 0.91
CDC27-202ENST00000525495 ABCA5Q8WWZ7 1642 aa20.73■□□□□ 0.91
CDC27-202ENST00000525495 SNAPC4Q5SXM2 1469 aa20.72■□□□□ 0.91
CDC27-202ENST00000525495 PBRM1Q86U86 1689 aa20.71■□□□□ 0.91
CDC27-202ENST00000525495 GRIN2BQ13224 1484 aa20.71■□□□□ 0.91
CDC27-202ENST00000525495 GAPVD1Q14C86 1478 aa20.71■□□□□ 0.91
CDC27-202ENST00000525495 MAGI1Q96QZ7 1491 aaPredicted RBP20.66■□□□□ 0.9
CDC27-202ENST00000525495 FBLN2P98095 1184 aa20.66■□□□□ 0.9
CDC27-202ENST00000525495 SYNJ2O15056 1496 aa20.59■□□□□ 0.89
CDC27-202ENST00000525495 CHMP7Q8WUX9 453 aaPredicted RBP20.56■□□□□ 0.88
CDC27-202ENST00000525495 RIMBP3CA6NJZ7 1639 aa20.53■□□□□ 0.88
CDC27-202ENST00000525495 RIMBP3BA6NNM3 1639 aa20.53■□□□□ 0.88
CDC27-202ENST00000525495 RIMBP3Q9UFD9 1639 aa20.53■□□□□ 0.88
CDC27-202ENST00000525495 ADAMTS12P58397 1594 aa20.52■□□□□ 0.88
CDC27-202ENST00000525495 ERICH3Q5RHP9 1530 aa20.52■□□□□ 0.88
CDC27-202ENST00000525495 ARHGEF11O15085 1522 aa20.5■□□□□ 0.87
CDC27-202ENST00000525495 CLASP1Q7Z460 1538 aa20.5■□□□□ 0.87
CDC27-202ENST00000525495 GRIN2AQ12879 1464 aa20.46■□□□□ 0.87
CDC27-202ENST00000525495 FHAD1B1AJZ9 1412 aa20.45■□□□□ 0.86
CDC27-202ENST00000525495 TRIM41Q8WV44 630 aa20.44■□□□□ 0.86
CDC27-202ENST00000525495 KIF27Q86VH2 1401 aa20.41■□□□□ 0.86
CDC27-202ENST00000525495 CEP170Q5SW79 1584 aa20.39■□□□□ 0.85
CDC27-202ENST00000525495 NUP160Q12769 1436 aa20.38■□□□□ 0.85
CDC27-202ENST00000525495 IGF1RP08069 1367 aa20.37■□□□□ 0.85
CDC27-202ENST00000525495 ARAP1Q96P48 1450 aa20.34■□□□□ 0.85
CDC27-202ENST00000525495 CUL7Q14999 1698 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms