Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.17■□□□□ 0.82
VCX3BQ9H321 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
VCX3BQ9H321 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
VCX3BQ9H321 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.17■□□□□ 0.82
VCX3BQ9H321 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.17■□□□□ 0.82
VCX3BQ9H321 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
VCX3BQ9H321 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VCX3BQ9H321 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
VCX3BQ9H321 AP005212.1-201ENST00000581547 1997 ntBASIC20.17■□□□□ 0.82
VCX3BQ9H321 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
VCX3BQ9H321 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
VCX3BQ9H321 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
VCX3BQ9H321 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VCX3BQ9H321 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
VCX3BQ9H321 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VCX3BQ9H321 LINC01529-204ENST00000636474 1715 ntBASIC20.16■□□□□ 0.82
VCX3BQ9H321 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.16■□□□□ 0.82
VCX3BQ9H321 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VCX3BQ9H321 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
VCX3BQ9H321 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VCX3BQ9H321 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.16■□□□□ 0.82
VCX3BQ9H321 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.16■□□□□ 0.82
VCX3BQ9H321 AIRN-201ENST00000601203 4374 ntBASIC20.16■□□□□ 0.82
VCX3BQ9H321 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VCX3BQ9H321 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
VCX3BQ9H321 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.16■□□□□ 0.82
VCX3BQ9H321 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
VCX3BQ9H321 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.16■□□□□ 0.82
VCX3BQ9H321 AC009086.3-201ENST00000623486 1008 ntBASIC20.16■□□□□ 0.82
VCX3BQ9H321 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VCX3BQ9H321 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
VCX3BQ9H321 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VCX3BQ9H321 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.16■□□□□ 0.82
VCX3BQ9H321 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VCX3BQ9H321 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VCX3BQ9H321 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VCX3BQ9H321 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.16■□□□□ 0.82
VCX3BQ9H321 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
VCX3BQ9H321 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
VCX3BQ9H321 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.15■□□□□ 0.82
VCX3BQ9H321 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
VCX3BQ9H321 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
VCX3BQ9H321 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
VCX3BQ9H321 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VCX3BQ9H321 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
VCX3BQ9H321 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
VCX3BQ9H321 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
VCX3BQ9H321 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.15■□□□□ 0.82
VCX3BQ9H321 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
VCX3BQ9H321 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
VCX3BQ9H321 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.15■□□□□ 0.82
VCX3BQ9H321 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
VCX3BQ9H321 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VCX3BQ9H321 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VCX3BQ9H321 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.15■□□□□ 0.82
VCX3BQ9H321 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.15■□□□□ 0.82
VCX3BQ9H321 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
VCX3BQ9H321 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VCX3BQ9H321 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
VCX3BQ9H321 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
VCX3BQ9H321 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
VCX3BQ9H321 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.14■□□□□ 0.81
VCX3BQ9H321 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VCX3BQ9H321 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VCX3BQ9H321 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.14■□□□□ 0.81
VCX3BQ9H321 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
VCX3BQ9H321 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.14■□□□□ 0.81
VCX3BQ9H321 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.14■□□□□ 0.81
VCX3BQ9H321 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
VCX3BQ9H321 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VCX3BQ9H321 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
VCX3BQ9H321 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VCX3BQ9H321 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VCX3BQ9H321 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
VCX3BQ9H321 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VCX3BQ9H321 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VCX3BQ9H321 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
VCX3BQ9H321 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VCX3BQ9H321 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
VCX3BQ9H321 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.13■□□□□ 0.81
VCX3BQ9H321 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
VCX3BQ9H321 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VCX3BQ9H321 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
VCX3BQ9H321 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VCX3BQ9H321 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
VCX3BQ9H321 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
VCX3BQ9H321 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VCX3BQ9H321 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.13■□□□□ 0.81
VCX3BQ9H321 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VCX3BQ9H321 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.12■□□□□ 0.81
VCX3BQ9H321 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.12■□□□□ 0.81
VCX3BQ9H321 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.12■□□□□ 0.81
VCX3BQ9H321 AFG3L1P-217ENST00000557444 2447 ntBASIC20.12■□□□□ 0.81
VCX3BQ9H321 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VCX3BQ9H321 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VCX3BQ9H321 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
VCX3BQ9H321 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
VCX3BQ9H321 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.12■□□□□ 0.81
VCX3BQ9H321 AL049796.1-201ENST00000565336 1766 ntBASIC20.12■□□□□ 0.81
VCX3BQ9H321 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms