RNA–Protein interactions for RNA: ENST00000448775.3

CLMP-201, Transcript of CXADR like membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLMP, Length 5,072 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMP-201ENST00000448775 DCAF8L2P0C7V8 631 aa30.25■■■□□ 2.43
CLMP-201ENST00000448775 NISCHQ9Y2I1 1504 aa30.15■■■□□ 2.42
CLMP-201ENST00000448775 SUPT5HO00267 1087 aaKnown RBP29.45■■■□□ 2.31
CLMP-201ENST00000448775 PELP1Q8IZL8 1130 aaKnown RBP28.86■■■□□ 2.21
CLMP-201ENST00000448775 SHROOM4Q9ULL8 1493 aa28.68■■■□□ 2.18
CLMP-201ENST00000448775 PCGF6Q9BYE7 350 aa28.5■■■□□ 2.15
CLMP-201ENST00000448775 MYT1Q01538 1121 aa28.31■■■□□ 2.12
CLMP-201ENST00000448775 ZEB1P37275 1124 aaPredicted RBP28.18■■■□□ 2.1
CLMP-201ENST00000448775 CENPBP07199 599 aaPredicted RBP28.18■■■□□ 2.1
CLMP-201ENST00000448775 EHMT2Q96KQ7 1210 aa28.16■■■□□ 2.1
CLMP-201ENST00000448775 APLP2Q06481 763 aa27.74■■■□□ 2.03
CLMP-201ENST00000448775 HRCP23327 699 aa27.71■■■□□ 2.03
CLMP-201ENST00000448775 FAM9AQ8IZU1 332 aaPredicted RBP27.67■■■□□ 2.02
CLMP-201ENST00000448775 CCER1Q8TC90 406 aaPredicted RBP27.61■■■□□ 2.01
CLMP-201ENST00000448775 ERICH6Q7L0X2 663 aa27.58■■■□□ 2
CLMP-201ENST00000448775 TTBK1Q5TCY1 1321 aaPredicted RBP27.42■■□□□ 1.98
CLMP-201ENST00000448775 TRIM26Q12899 539 aaPredicted RBP27.3■■□□□ 1.96
CLMP-201ENST00000448775 TRIM41Q8WV44 630 aa27.28■■□□□ 1.96
CLMP-201ENST00000448775 YTHDC1Q96MU7 727 aaKnown RBP27.22■■□□□ 1.95
CLMP-201ENST00000448775 NEFLP07196 543 aa27.12■■□□□ 1.93
CLMP-201ENST00000448775 PPARGC1BQ86YN6 1023 aaKnown RBP26.94■■□□□ 1.9
CLMP-201ENST00000448775 CHIC1Q5VXU3 224 aa26.77■■□□□ 1.88
CLMP-201ENST00000448775 UBTFP17480 764 aaKnown RBP26.74■■□□□ 1.87
CLMP-201ENST00000448775 RANGAP1P46060 587 aaPredicted RBP26.67■■□□□ 1.86
CLMP-201ENST00000448775 LOC105371045A0A1W2PR82 267 aa26.63■■□□□ 1.85
CLMP-201ENST00000448775 DIEXFQ68CQ4 756 aaKnown RBP26.5■■□□□ 1.83
CLMP-201ENST00000448775 GTF3C3Q9Y5Q9 886 aa26.35■■□□□ 1.81
CLMP-201ENST00000448775 ATP1B4Q9UN42 357 aaPredicted RBP26.29■■□□□ 1.8
CLMP-201ENST00000448775 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.27■■□□□ 1.8
CLMP-201ENST00000448775 HNRNPUL2Q1KMD3 747 aaKnown RBP26.14■■□□□ 1.78
CLMP-201ENST00000448775 DAXXQ9UER7 740 aaPredicted RBP26.12■■□□□ 1.77
CLMP-201ENST00000448775 ACIN1Q9UKV3 1341 aaKnown RBP26.11■■□□□ 1.77
CLMP-201ENST00000448775 RTL5Q5HYW3 569 aaPredicted RBP26.02■■□□□ 1.76
CLMP-201ENST00000448775 ITGAEP38570 1179 aa25.92■■□□□ 1.74
CLMP-201ENST00000448775 ZNF316A6NFI3 1004 aaPredicted RBP25.81■■□□□ 1.72
CLMP-201ENST00000448775 BCANQ96GW7 911 aa25.75■■□□□ 1.71
CLMP-201ENST00000448775 ABCC9O60706 1549 aa25.69■■□□□ 1.7
CLMP-201ENST00000448775 POLR3GLQ9BT43 218 aa25.65■■□□□ 1.7
CLMP-201ENST00000448775 CDK11AQ9UQ88 783 aaPredicted RBP25.64■■□□□ 1.7
CLMP-201ENST00000448775 CLSPNQ9HAW4 1339 aa25.59■■□□□ 1.69
CLMP-201ENST00000448775 SCAF1Q9H7N4 1312 aaKnown RBP25.54■■□□□ 1.68
CLMP-201ENST00000448775 DCAF1Q9Y4B6 1507 aa25.5■■□□□ 1.67
CLMP-201ENST00000448775 PABPN1Q86U42 306 aaKnown RBP eCLIP25.47■■□□□ 1.67
CLMP-201ENST00000448775 ANP32CO43423 234 aa25.47■■□□□ 1.67
CLMP-201ENST00000448775 CNGB1Q14028 1251 aaPredicted RBP25.46■■□□□ 1.67
CLMP-201ENST00000448775 NEUROD1Q13562 356 aa25.46■■□□□ 1.67
CLMP-201ENST00000448775 FAM50AQ14320 339 aaKnown RBP25.24■■□□□ 1.63
CLMP-201ENST00000448775 MYT1LQ9UL68 1186 aa25.23■■□□□ 1.63
CLMP-201ENST00000448775 ANP32AP39687 249 aaKnown RBP25.2■■□□□ 1.62
CLMP-201ENST00000448775 FKBP8Q14318 412 aa25.17■■□□□ 1.62
CLMP-201ENST00000448775 TRIM52Q96A61 297 aa25.03■■□□□ 1.6
CLMP-201ENST00000448775 ZCCHC6Q5VYS8 1495 aaKnown RBP25.02■■□□□ 1.6
CLMP-201ENST00000448775 EIF5BO60841 1220 aaKnown RBP24.95■■□□□ 1.59
CLMP-201ENST00000448775 CSRNP3Q8WYN3 585 aa24.92■■□□□ 1.58
CLMP-201ENST00000448775 MIER1Q8N108 512 aa24.9■■□□□ 1.58
CLMP-201ENST00000448775 ANP32EQ9BTT0 268 aa24.86■■□□□ 1.57
CLMP-201ENST00000448775 NPM2Q86SE8 214 aaKnown RBP24.85■■□□□ 1.57
CLMP-201ENST00000448775 HNRNPUQ00839 825 aaKnown RBP eCLIP24.8■■□□□ 1.56
CLMP-201ENST00000448775 SCRIBQ14160 1630 aa24.78■■□□□ 1.56
CLMP-201ENST00000448775 DDX10Q13206 875 aaKnown RBP24.76■■□□□ 1.55
CLMP-201ENST00000448775 SLC4A1APQ9BWU0 796 aaKnown RBP24.76■■□□□ 1.55
CLMP-201ENST00000448775 GLIPR1L2Q4G1C9 344 aa24.76■■□□□ 1.55
CLMP-201ENST00000448775 ZNF326Q5BKZ1 582 aaKnown RBP24.74■■□□□ 1.55
CLMP-201ENST00000448775 ZBTB47Q9UFB7 747 aaPredicted RBP24.72■■□□□ 1.55
CLMP-201ENST00000448775 NBR1Q14596 966 aa24.71■■□□□ 1.55
CLMP-201ENST00000448775 MYO15BQ96JP2 1530 aa24.71■■□□□ 1.55
CLMP-201ENST00000448775 CCDC180Q9P1Z9 1646 aa24.67■■□□□ 1.54
CLMP-201ENST00000448775 CANXP27824 592 aaKnown RBP24.62■■□□□ 1.53
CLMP-201ENST00000448775 TONSLQ96HA7 1378 aa24.61■■□□□ 1.53
CLMP-201ENST00000448775 CCDC136Q96JN2 1154 aa24.59■■□□□ 1.53
CLMP-201ENST00000448775 FAM9BQ8IZU0 186 aa24.54■■□□□ 1.52
CLMP-201ENST00000448775 ANP32BQ92688 251 aaKnown RBP24.5■■□□□ 1.51
CLMP-201ENST00000448775 P3H3Q8IVL6 736 aa24.49■■□□□ 1.51
CLMP-201ENST00000448775 FBLN2P98095 1184 aa24.45■■□□□ 1.5
CLMP-201ENST00000448775 UPF2Q9HAU5 1272 aaKnown RBP24.42■■□□□ 1.5
CLMP-201ENST00000448775 IRX6P78412 446 aaPredicted RBP24.4■■□□□ 1.5
CLMP-201ENST00000448775 BCL11AQ9H165 835 aa24.4■■□□□ 1.5
CLMP-201ENST00000448775 SUPT16HQ9Y5B9 1047 aaKnown RBP24.37■■□□□ 1.49
CLMP-201ENST00000448775 MRS2Q9HD23 443 aa24.35■■□□□ 1.49
CLMP-201ENST00000448775 ARID3CA6NKF2 412 aa24.3■■□□□ 1.48
CLMP-201ENST00000448775 TMC1Q8TDI8 760 aa24.29■■□□□ 1.48
CLMP-201ENST00000448775 HSP90AA1P07900 732 aaKnown RBP24.28■■□□□ 1.48
CLMP-201ENST00000448775 DDRGK1Q96HY6 314 aa24.23■■□□□ 1.47
CLMP-201ENST00000448775 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.22■■□□□ 1.47
CLMP-201ENST00000448775 RSF1Q96T23 1441 aaPredicted RBP24.19■■□□□ 1.46
CLMP-201ENST00000448775 SALL2Q9Y467 1007 aaPredicted RBP24.19■■□□□ 1.46
CLMP-201ENST00000448775 NEFMP07197 916 aa24.18■■□□□ 1.46
CLMP-201ENST00000448775 HIRIP3Q9BW71 556 aaPredicted RBP24.16■■□□□ 1.46
CLMP-201ENST00000448775 CLIP1P30622 1438 aa24.15■■□□□ 1.46
CLMP-201ENST00000448775 PPM1GO15355 546 aaPredicted RBP24.15■■□□□ 1.46
CLMP-201ENST00000448775 ARXQ96QS3 562 aa24.13■■□□□ 1.45
CLMP-201ENST00000448775 CEP162Q5TB80 1403 aa24.13■■□□□ 1.45
CLMP-201ENST00000448775 PPP4R2Q9NY27 417 aa24.12■■□□□ 1.45
CLMP-201ENST00000448775 NOP58Q9Y2X3 529 aaKnown RBP24.11■■□□□ 1.45
CLMP-201ENST00000448775 EIF4G2P78344 907 aaKnown RBP eCLIP24.09■■□□□ 1.45
CLMP-201ENST00000448775 RB1CC1Q8TDY2 1594 aa24.09■■□□□ 1.45
CLMP-201ENST00000448775 ERICH6BQ5W0A0 696 aa24.08■■□□□ 1.44
CLMP-201ENST00000448775 RBM19Q9Y4C8 960 aaKnown RBP24.05■■□□□ 1.44
CLMP-201ENST00000448775 ZNF777Q9ULD5 760 aaPredicted RBP24.05■■□□□ 1.44
CLMP-201ENST00000448775 EEA1Q15075 1411 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms