RNA–Protein interactions for RNA: ENST00000358660.3

NTRK1-201, Transcript of neurotrophic receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NTRK1, Length 2,492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK1-201ENST00000358660 NISCHQ9Y2I1 1504 aa39.13■■■■□ 3.86
NTRK1-201ENST00000358660 CCDC180Q9P1Z9 1646 aa33.64■■■□□ 2.98
NTRK1-201ENST00000358660 ZCCHC6Q5VYS8 1495 aaKnown RBP32.93■■■□□ 2.86
NTRK1-201ENST00000358660 SHROOM4Q9ULL8 1493 aa32.7■■■□□ 2.83
NTRK1-201ENST00000358660 DCAF8L2P0C7V8 631 aa32.65■■■□□ 2.82
NTRK1-201ENST00000358660 DCAF1Q9Y4B6 1507 aa32.12■■■□□ 2.73
NTRK1-201ENST00000358660 HRCP23327 699 aa32■■■□□ 2.71
NTRK1-201ENST00000358660 SUPT5HO00267 1087 aaKnown RBP31.97■■■□□ 2.71
NTRK1-201ENST00000358660 ABCC9O60706 1549 aa31.93■■■□□ 2.7
NTRK1-201ENST00000358660 MYO15BQ96JP2 1530 aa31.52■■■□□ 2.64
NTRK1-201ENST00000358660 CHIC1Q5VXU3 224 aa31.4■■■□□ 2.62
NTRK1-201ENST00000358660 SCRIBQ14160 1630 aa31.39■■■□□ 2.62
NTRK1-201ENST00000358660 NACADO15069 1562 aa31.33■■■□□ 2.61
NTRK1-201ENST00000358660 PCGF6Q9BYE7 350 aa31.24■■■□□ 2.59
NTRK1-201ENST00000358660 PPARGC1BQ86YN6 1023 aaKnown RBP31.13■■■□□ 2.57
NTRK1-201ENST00000358660 RB1CC1Q8TDY2 1594 aa30.99■■■□□ 2.55
NTRK1-201ENST00000358660 PELP1Q8IZL8 1130 aaKnown RBP30.94■■■□□ 2.54
NTRK1-201ENST00000358660 RSF1Q96T23 1441 aaPredicted RBP30.64■■■□□ 2.5
NTRK1-201ENST00000358660 CECR2Q9BXF3 1484 aa30.6■■■□□ 2.49
NTRK1-201ENST00000358660 UNC13AQ9UPW8 1703 aa30.46■■■□□ 2.47
NTRK1-201ENST00000358660 TRIM26Q12899 539 aaPredicted RBP30.41■■■□□ 2.46
NTRK1-201ENST00000358660 MROH2BQ7Z745 1585 aa30.38■■■□□ 2.45
NTRK1-201ENST00000358660 PABPN1Q86U42 306 aaKnown RBP eCLIP30.37■■■□□ 2.45
NTRK1-201ENST00000358660 LOC105371045A0A1W2PR82 267 aa30.34■■■□□ 2.45
NTRK1-201ENST00000358660 ZEB1P37275 1124 aaPredicted RBP30.25■■■□□ 2.43
NTRK1-201ENST00000358660 BICRAQ9NZM4 1560 aa30.21■■■□□ 2.43
NTRK1-201ENST00000358660 SCAF1Q9H7N4 1312 aaKnown RBP30.16■■■□□ 2.42
NTRK1-201ENST00000358660 WIZO95785 1651 aa30.14■■■□□ 2.42
NTRK1-201ENST00000358660 BAZ1AQ9NRL2 1556 aaPredicted RBP30.11■■■□□ 2.41
NTRK1-201ENST00000358660 SMARCA4P51532 1647 aa29.96■■■□□ 2.39
NTRK1-201ENST00000358660 TRIM41Q8WV44 630 aa29.85■■■□□ 2.37
NTRK1-201ENST00000358660 MYT1Q01538 1121 aa29.78■■■□□ 2.36
NTRK1-201ENST00000358660 TOP2AP11388 1531 aaKnown RBP29.67■■■□□ 2.34
NTRK1-201ENST00000358660 CCDC88BA6NC98 1476 aa29.54■■■□□ 2.32
NTRK1-201ENST00000358660 ACIN1Q9UKV3 1341 aaKnown RBP29.52■■■□□ 2.32
NTRK1-201ENST00000358660 SMARCA2P51531 1590 aa29.49■■■□□ 2.31
NTRK1-201ENST00000358660 FAM9AQ8IZU1 332 aaPredicted RBP29.47■■■□□ 2.31
NTRK1-201ENST00000358660 PEG3Q9GZU2 1588 aa29.45■■■□□ 2.31
NTRK1-201ENST00000358660 ATAD2BQ9ULI0 1458 aa29.44■■■□□ 2.3
NTRK1-201ENST00000358660 EIF4G1Q04637 1599 aaKnown RBP29.44■■■□□ 2.3
NTRK1-201ENST00000358660 NEUROD1Q13562 356 aa29.36■■■□□ 2.29
NTRK1-201ENST00000358660 BAZ1BQ9UIG0 1483 aaKnown RBP29.28■■■□□ 2.28
NTRK1-201ENST00000358660 GTF3C3Q9Y5Q9 886 aa29.2■■■□□ 2.26
NTRK1-201ENST00000358660 CENPBP07199 599 aaPredicted RBP29.18■■■□□ 2.26
NTRK1-201ENST00000358660 ABCC8Q09428 1581 aa29.17■■■□□ 2.26
NTRK1-201ENST00000358660 EHMT2Q96KQ7 1210 aa29.07■■■□□ 2.24
NTRK1-201ENST00000358660 NCAPD3P42695 1498 aa29.02■■■□□ 2.24
NTRK1-201ENST00000358660 DIEXFQ68CQ4 756 aaKnown RBP29.02■■■□□ 2.24
NTRK1-201ENST00000358660 CCER1Q8TC90 406 aaPredicted RBP28.97■■■□□ 2.23
NTRK1-201ENST00000358660 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.96■■■□□ 2.23
NTRK1-201ENST00000358660 WRNQ14191 1432 aaPredicted RBP eCLIP28.93■■■□□ 2.22
NTRK1-201ENST00000358660 HMGXB3Q12766 1538 aa28.93■■■□□ 2.22
NTRK1-201ENST00000358660 EEA1Q15075 1411 aa28.77■■■□□ 2.2
NTRK1-201ENST00000358660 SOGA1O94964 1423 aa28.75■■■□□ 2.19
NTRK1-201ENST00000358660 CEP162Q5TB80 1403 aa28.74■■■□□ 2.19
NTRK1-201ENST00000358660 CC2D2AQ9P2K1 1620 aa28.74■■■□□ 2.19
NTRK1-201ENST00000358660 TNIKQ9UKE5 1360 aa28.73■■■□□ 2.19
NTRK1-201ENST00000358660 SYNJ1O43426 1573 aa28.68■■■□□ 2.18
NTRK1-201ENST00000358660 RUSC2Q8N2Y8 1516 aa28.65■■■□□ 2.18
NTRK1-201ENST00000358660 CSRNP3Q8WYN3 585 aa28.54■■■□□ 2.16
NTRK1-201ENST00000358660 CFTRP13569 1480 aa28.54■■■□□ 2.16
NTRK1-201ENST00000358660 ZNF316A6NFI3 1004 aaPredicted RBP28.52■■■□□ 2.16
NTRK1-201ENST00000358660 GOLGA3Q08378 1498 aa28.52■■■□□ 2.16
NTRK1-201ENST00000358660 KIF21BO75037 1637 aa28.4■■■□□ 2.14
NTRK1-201ENST00000358660 CADPSQ9ULU8 1353 aa28.4■■■□□ 2.14
NTRK1-201ENST00000358660 TOP2BQ02880 1626 aa28.39■■■□□ 2.14
NTRK1-201ENST00000358660 YTHDC1Q96MU7 727 aaKnown RBP28.36■■■□□ 2.13
NTRK1-201ENST00000358660 DNAJC5BQ9UF47 199 aa28.36■■■□□ 2.13
NTRK1-201ENST00000358660 CUX1P39880 1505 aa28.34■■■□□ 2.13
NTRK1-201ENST00000358660 UBTFP17480 764 aaKnown RBP28.34■■■□□ 2.13
NTRK1-201ENST00000358660 CEP164Q9UPV0 1460 aa28.33■■■□□ 2.13
NTRK1-201ENST00000358660 BIVM-ERCC5R4GMW8 1640 aa28.29■■■□□ 2.12
NTRK1-201ENST00000358660 TTBK1Q5TCY1 1321 aaPredicted RBP28.26■■■□□ 2.11
NTRK1-201ENST00000358660 MIER1Q8N108 512 aa28.25■■■□□ 2.11
NTRK1-201ENST00000358660 NESP48681 1621 aa28.2■■■□□ 2.11
NTRK1-201ENST00000358660 PRDM2Q13029 1718 aa28.16■■■□□ 2.1
NTRK1-201ENST00000358660 CLIP1P30622 1438 aa28.13■■■□□ 2.09
NTRK1-201ENST00000358660 VPS8Q8N3P4 1428 aa28.12■■■□□ 2.09
NTRK1-201ENST00000358660 FANCD2Q9BXW9 1451 aa28.11■■■□□ 2.09
NTRK1-201ENST00000358660 RAPGEF2Q9Y4G8 1499 aa28.08■■■□□ 2.09
NTRK1-201ENST00000358660 CLSPNQ9HAW4 1339 aa28.03■■■□□ 2.08
NTRK1-201ENST00000358660 KIF27Q86VH2 1401 aa27.97■■■□□ 2.07
NTRK1-201ENST00000358660 FGD5Q6ZNL6 1462 aa27.96■■■□□ 2.07
NTRK1-201ENST00000358660 RANGAP1P46060 587 aaPredicted RBP27.95■■■□□ 2.06
NTRK1-201ENST00000358660 PRXQ9BXM0 1461 aa27.91■■■□□ 2.06
NTRK1-201ENST00000358660 CUX2O14529 1486 aa27.9■■■□□ 2.06
NTRK1-201ENST00000358660 ERICH3Q5RHP9 1530 aa27.89■■■□□ 2.05
NTRK1-201ENST00000358660 LAMC3Q9Y6N6 1575 aa27.88■■■□□ 2.05
NTRK1-201ENST00000358660 HNRNPUL2Q1KMD3 747 aaKnown RBP27.86■■■□□ 2.05
NTRK1-201ENST00000358660 SUPT16HQ9Y5B9 1047 aaKnown RBP27.85■■■□□ 2.05
NTRK1-201ENST00000358660 TOPBP1Q92547 1522 aa27.83■■■□□ 2.05
NTRK1-201ENST00000358660 APLP2Q06481 763 aa27.81■■■□□ 2.04
NTRK1-201ENST00000358660 RAD54L2Q9Y4B4 1467 aa27.8■■■□□ 2.04
NTRK1-201ENST00000358660 DNMBPQ6XZF7 1577 aa27.8■■■□□ 2.04
NTRK1-201ENST00000358660 ANP32EQ9BTT0 268 aa27.8■■■□□ 2.04
NTRK1-201ENST00000358660 IGF1RP08069 1367 aa27.79■■■□□ 2.04
NTRK1-201ENST00000358660 POLA1P09884 1462 aaPredicted RBP27.77■■■□□ 2.04
NTRK1-201ENST00000358660 URB2Q14146 1524 aaKnown RBP27.76■■■□□ 2.03
NTRK1-201ENST00000358660 PDS5BQ9NTI5 1447 aa27.75■■■□□ 2.03
NTRK1-201ENST00000358660 TSHZ2Q9NRE2 1034 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms