RNA–Protein interactions for RNA: ENST00000544935.5

PRKAR1B-212, Transcript of protein kinase cAMP-dependent type I regulatory subunit beta, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRKAR1B, Length 2,494 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1B-212ENST00000544935 NISCHQ9Y2I1 1504 aa40.4■■■■■ 4.06
PRKAR1B-212ENST00000544935 CCDC180Q9P1Z9 1646 aa35.66■■■■□ 3.3
PRKAR1B-212ENST00000544935 ABCC9O60706 1549 aa34.06■■■■□ 3.04
PRKAR1B-212ENST00000544935 ZCCHC6Q5VYS8 1495 aaKnown RBP33.94■■■■□ 3.02
PRKAR1B-212ENST00000544935 DCAF1Q9Y4B6 1507 aa33.5■■■□□ 2.95
PRKAR1B-212ENST00000544935 MYO15BQ96JP2 1530 aa33.36■■■□□ 2.93
PRKAR1B-212ENST00000544935 DCAF8L2P0C7V8 631 aa33.33■■■□□ 2.93
PRKAR1B-212ENST00000544935 SHROOM4Q9ULL8 1493 aa33.3■■■□□ 2.92
PRKAR1B-212ENST00000544935 NACADO15069 1562 aa33.3■■■□□ 2.92
PRKAR1B-212ENST00000544935 RB1CC1Q8TDY2 1594 aa33.15■■■□□ 2.9
PRKAR1B-212ENST00000544935 SCRIBQ14160 1630 aa32.53■■■□□ 2.8
PRKAR1B-212ENST00000544935 UNC13AQ9UPW8 1703 aa32.49■■■□□ 2.79
PRKAR1B-212ENST00000544935 SUPT5HO00267 1087 aaKnown RBP32.29■■■□□ 2.76
PRKAR1B-212ENST00000544935 BICRAQ9NZM4 1560 aa32.13■■■□□ 2.73
PRKAR1B-212ENST00000544935 HRCP23327 699 aa31.91■■■□□ 2.7
PRKAR1B-212ENST00000544935 PABPN1Q86U42 306 aaKnown RBP eCLIP31.91■■■□□ 2.7
PRKAR1B-212ENST00000544935 RSF1Q96T23 1441 aaPredicted RBP31.46■■■□□ 2.63
PRKAR1B-212ENST00000544935 PELP1Q8IZL8 1130 aaKnown RBP31.38■■■□□ 2.61
PRKAR1B-212ENST00000544935 CECR2Q9BXF3 1484 aa31.35■■■□□ 2.61
PRKAR1B-212ENST00000544935 BAZ1AQ9NRL2 1556 aaPredicted RBP31.27■■■□□ 2.6
PRKAR1B-212ENST00000544935 SMARCA4P51532 1647 aa31.21■■■□□ 2.59
PRKAR1B-212ENST00000544935 EIF4G1Q04637 1599 aaKnown RBP31.21■■■□□ 2.59
PRKAR1B-212ENST00000544935 PPARGC1BQ86YN6 1023 aaKnown RBP31.2■■■□□ 2.59
PRKAR1B-212ENST00000544935 MROH2BQ7Z745 1585 aa31.16■■■□□ 2.58
PRKAR1B-212ENST00000544935 CHIC1Q5VXU3 224 aa31.13■■■□□ 2.57
PRKAR1B-212ENST00000544935 PCGF6Q9BYE7 350 aa31■■■□□ 2.55
PRKAR1B-212ENST00000544935 WIZO95785 1651 aa30.93■■■□□ 2.54
PRKAR1B-212ENST00000544935 PEG3Q9GZU2 1588 aa30.91■■■□□ 2.54
PRKAR1B-212ENST00000544935 CC2D2AQ9P2K1 1620 aa30.9■■■□□ 2.54
PRKAR1B-212ENST00000544935 SMARCA2P51531 1590 aa30.84■■■□□ 2.53
PRKAR1B-212ENST00000544935 ATAD2BQ9ULI0 1458 aa30.81■■■□□ 2.52
PRKAR1B-212ENST00000544935 NCAPD3P42695 1498 aa30.69■■■□□ 2.5
PRKAR1B-212ENST00000544935 HMGXB3Q12766 1538 aa30.64■■■□□ 2.5
PRKAR1B-212ENST00000544935 TOP2AP11388 1531 aaKnown RBP30.61■■■□□ 2.49
PRKAR1B-212ENST00000544935 BAZ1BQ9UIG0 1483 aaKnown RBP30.6■■■□□ 2.49
PRKAR1B-212ENST00000544935 DNAJC5BQ9UF47 199 aa30.54■■■□□ 2.48
PRKAR1B-212ENST00000544935 SCAF1Q9H7N4 1312 aaKnown RBP30.43■■■□□ 2.46
PRKAR1B-212ENST00000544935 CCDC88BA6NC98 1476 aa30.32■■■□□ 2.44
PRKAR1B-212ENST00000544935 TRIM41Q8WV44 630 aa30.31■■■□□ 2.44
PRKAR1B-212ENST00000544935 MYT1Q01538 1121 aa30.28■■■□□ 2.44
PRKAR1B-212ENST00000544935 LOC105371045A0A1W2PR82 267 aa29.99■■■□□ 2.39
PRKAR1B-212ENST00000544935 TRIM26Q12899 539 aaPredicted RBP29.93■■■□□ 2.38
PRKAR1B-212ENST00000544935 ABCC8Q09428 1581 aa29.86■■■□□ 2.37
PRKAR1B-212ENST00000544935 CFTRP13569 1480 aa29.82■■■□□ 2.36
PRKAR1B-212ENST00000544935 ZEB1P37275 1124 aaPredicted RBP29.82■■■□□ 2.36
PRKAR1B-212ENST00000544935 CADPSQ9ULU8 1353 aa29.81■■■□□ 2.36
PRKAR1B-212ENST00000544935 LAMC3Q9Y6N6 1575 aa29.8■■■□□ 2.36
PRKAR1B-212ENST00000544935 FAM9AQ8IZU1 332 aaPredicted RBP29.8■■■□□ 2.36
PRKAR1B-212ENST00000544935 PRDM2Q13029 1718 aa29.78■■■□□ 2.36
PRKAR1B-212ENST00000544935 NESP48681 1621 aa29.7■■■□□ 2.35
PRKAR1B-212ENST00000544935 WRNQ14191 1432 aaPredicted RBP eCLIP29.61■■■□□ 2.338e-6■■■■■ 51.9
PRKAR1B-212ENST00000544935 ACIN1Q9UKV3 1341 aaKnown RBP29.54■■■□□ 2.32
PRKAR1B-212ENST00000544935 PDS5BQ9NTI5 1447 aa29.52■■■□□ 2.32
PRKAR1B-212ENST00000544935 FANCD2Q9BXW9 1451 aa29.48■■■□□ 2.31
PRKAR1B-212ENST00000544935 SYNJ1O43426 1573 aa29.45■■■□□ 2.31
PRKAR1B-212ENST00000544935 KIF21AQ7Z4S6 1674 aa29.45■■■□□ 2.31
PRKAR1B-212ENST00000544935 NEUROD1Q13562 356 aa29.44■■■□□ 2.3
PRKAR1B-212ENST00000544935 EEA1Q15075 1411 aa29.43■■■□□ 2.3
PRKAR1B-212ENST00000544935 SOGA1O94964 1423 aa29.42■■■□□ 2.3
PRKAR1B-212ENST00000544935 EHMT2Q96KQ7 1210 aa29.39■■■□□ 2.3
PRKAR1B-212ENST00000544935 CEP164Q9UPV0 1460 aa29.39■■■□□ 2.29
PRKAR1B-212ENST00000544935 ERCC6Q03468 1493 aa29.3■■■□□ 2.28
PRKAR1B-212ENST00000544935 GTF3C3Q9Y5Q9 886 aa29.3■■■□□ 2.28
PRKAR1B-212ENST00000544935 TOP2BQ02880 1626 aa29.28■■■□□ 2.28
PRKAR1B-212ENST00000544935 RUSC2Q8N2Y8 1516 aa29.26■■■□□ 2.27
PRKAR1B-212ENST00000544935 CSRNP3Q8WYN3 585 aa29.25■■■□□ 2.27
PRKAR1B-212ENST00000544935 BIVM-ERCC5R4GMW8 1640 aa29.23■■■□□ 2.27
PRKAR1B-212ENST00000544935 MRC2Q9UBG0 1479 aa29.19■■■□□ 2.26
PRKAR1B-212ENST00000544935 CUX1P39880 1505 aa29.18■■■□□ 2.26
PRKAR1B-212ENST00000544935 DNMBPQ6XZF7 1577 aa29.17■■■□□ 2.26
PRKAR1B-212ENST00000544935 THOC2Q8NI27 1593 aaKnown RBP29.15■■■□□ 2.26
PRKAR1B-212ENST00000544935 URB2Q14146 1524 aaKnown RBP29.15■■■□□ 2.26
PRKAR1B-212ENST00000544935 TOPBP1Q92547 1522 aa29.11■■■□□ 2.25
PRKAR1B-212ENST00000544935 WDR62O43379 1518 aa29.1■■■□□ 2.25
PRKAR1B-212ENST00000544935 GOLGA3Q08378 1498 aa29.06■■■□□ 2.24
PRKAR1B-212ENST00000544935 TNIKQ9UKE5 1360 aa29.06■■■□□ 2.24
PRKAR1B-212ENST00000544935 CENPBP07199 599 aaPredicted RBP29.04■■■□□ 2.24
PRKAR1B-212ENST00000544935 KIF21BO75037 1637 aa29.01■■■□□ 2.23
PRKAR1B-212ENST00000544935 CEP162Q5TB80 1403 aa28.96■■■□□ 2.23
PRKAR1B-212ENST00000544935 UBTFP17480 764 aaKnown RBP28.95■■■□□ 2.23
PRKAR1B-212ENST00000544935 FGD5Q6ZNL6 1462 aa28.94■■■□□ 2.22
PRKAR1B-212ENST00000544935 POLA1P09884 1462 aaPredicted RBP28.9■■■□□ 2.22
PRKAR1B-212ENST00000544935 KIF27Q86VH2 1401 aa28.82■■■□□ 2.2
PRKAR1B-212ENST00000544935 CUX2O14529 1486 aa28.8■■■□□ 2.2
PRKAR1B-212ENST00000544935 RAPGEF2Q9Y4G8 1499 aa28.79■■■□□ 2.2
PRKAR1B-212ENST00000544935 DIEXFQ68CQ4 756 aaKnown RBP28.79■■■□□ 2.2
PRKAR1B-212ENST00000544935 TARBP1Q13395 1621 aaKnown RBP28.77■■■□□ 2.2
PRKAR1B-212ENST00000544935 WDR97A6NE52 1622 aa28.75■■■□□ 2.19
PRKAR1B-212ENST00000544935 RAD54L2Q9Y4B4 1467 aa28.75■■■□□ 2.19
PRKAR1B-212ENST00000544935 IFT140Q96RY7 1462 aa28.74■■■□□ 2.19
PRKAR1B-212ENST00000544935 PRXQ9BXM0 1461 aa28.73■■■□□ 2.19
PRKAR1B-212ENST00000544935 ERICH3Q5RHP9 1530 aa28.73■■■□□ 2.19
PRKAR1B-212ENST00000544935 ABCA10Q8WWZ4 1543 aa28.71■■■□□ 2.19
PRKAR1B-212ENST00000544935 CLIP1P30622 1438 aa28.63■■■□□ 2.17
PRKAR1B-212ENST00000544935 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.58■■■□□ 2.17
PRKAR1B-212ENST00000544935 ABCA5Q8WWZ7 1642 aa28.57■■■□□ 2.16
PRKAR1B-212ENST00000544935 TTBK1Q5TCY1 1321 aaPredicted RBP28.52■■■□□ 2.16
PRKAR1B-212ENST00000544935 ZNF608Q9ULD9 1512 aaPredicted RBP28.52■■■□□ 2.16
PRKAR1B-212ENST00000544935 CCER1Q8TC90 406 aaPredicted RBP28.52■■■□□ 2.16
PRKAR1B-212ENST00000544935 EIF4G3O43432 1585 aaKnown RBP28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms