Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.98■□□□□ 0.79
TRBV5-3A0A0A0MS03 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.98■□□□□ 0.79
TRBV5-3A0A0A0MS03 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
TRBV5-3A0A0A0MS03 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV5-3A0A0A0MS03 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV5-3A0A0A0MS03 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV5-3A0A0A0MS03 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV5-3A0A0A0MS03 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.98■□□□□ 0.79
TRBV5-3A0A0A0MS03 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV5-3A0A0A0MS03 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TRBV5-3A0A0A0MS03 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
TRBV5-3A0A0A0MS03 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-3A0A0A0MS03 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-3A0A0A0MS03 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-3A0A0A0MS03 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-3A0A0A0MS03 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-3A0A0A0MS03 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-3A0A0A0MS03 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.97■□□□□ 0.79
TRBV5-3A0A0A0MS03 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-3A0A0A0MS03 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-3A0A0A0MS03 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-3A0A0A0MS03 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-3A0A0A0MS03 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
TRBV5-3A0A0A0MS03 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-3A0A0A0MS03 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-3A0A0A0MS03 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.97■□□□□ 0.79
TRBV5-3A0A0A0MS03 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-3A0A0A0MS03 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.97■□□□□ 0.79
TRBV5-3A0A0A0MS03 AC011298.3-201ENST00000615796 283 ntBASIC19.97■□□□□ 0.79
TRBV5-3A0A0A0MS03 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-3A0A0A0MS03 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.97■□□□□ 0.79
TRBV5-3A0A0A0MS03 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-3A0A0A0MS03 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV5-3A0A0A0MS03 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.97■□□□□ 0.79
TRBV5-3A0A0A0MS03 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TRBV5-3A0A0A0MS03 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-3A0A0A0MS03 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-3A0A0A0MS03 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-3A0A0A0MS03 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-3A0A0A0MS03 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.96■□□□□ 0.79
TRBV5-3A0A0A0MS03 FEM1AP1-201ENST00000431297 1995 ntBASIC19.96■□□□□ 0.79
TRBV5-3A0A0A0MS03 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-3A0A0A0MS03 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-3A0A0A0MS03 MIR4466-201ENST00000606121 54 ntBASIC19.96■□□□□ 0.79
TRBV5-3A0A0A0MS03 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TRBV5-3A0A0A0MS03 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-3A0A0A0MS03 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-3A0A0A0MS03 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-3A0A0A0MS03 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-3A0A0A0MS03 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-3A0A0A0MS03 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-3A0A0A0MS03 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV5-3A0A0A0MS03 SYT6-210ENST00000641643 1587 ntBASIC19.95■□□□□ 0.78
TRBV5-3A0A0A0MS03 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.95■□□□□ 0.78
TRBV5-3A0A0A0MS03 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.95■□□□□ 0.78
TRBV5-3A0A0A0MS03 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV5-3A0A0A0MS03 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.95■□□□□ 0.78
TRBV5-3A0A0A0MS03 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV5-3A0A0A0MS03 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV5-3A0A0A0MS03 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV5-3A0A0A0MS03 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
TRBV5-3A0A0A0MS03 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.95■□□□□ 0.78
TRBV5-3A0A0A0MS03 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV5-3A0A0A0MS03 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV5-3A0A0A0MS03 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TRBV5-3A0A0A0MS03 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
TRBV5-3A0A0A0MS03 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.95■□□□□ 0.78
TRBV5-3A0A0A0MS03 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV5-3A0A0A0MS03 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TRBV5-3A0A0A0MS03 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV5-3A0A0A0MS03 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV5-3A0A0A0MS03 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.95■□□□□ 0.78
TRBV5-3A0A0A0MS03 LINC01006-201ENST00000333319 2292 ntBASIC19.95■□□□□ 0.78
TRBV5-3A0A0A0MS03 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TRBV5-3A0A0A0MS03 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV5-3A0A0A0MS03 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV5-3A0A0A0MS03 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV5-3A0A0A0MS03 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV5-3A0A0A0MS03 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV5-3A0A0A0MS03 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV5-3A0A0A0MS03 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.94■□□□□ 0.78
TRBV5-3A0A0A0MS03 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.94■□□□□ 0.78
TRBV5-3A0A0A0MS03 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
TRBV5-3A0A0A0MS03 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV5-3A0A0A0MS03 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.94■□□□□ 0.78
TRBV5-3A0A0A0MS03 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV5-3A0A0A0MS03 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.94■□□□□ 0.78
TRBV5-3A0A0A0MS03 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV5-3A0A0A0MS03 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV5-3A0A0A0MS03 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV5-3A0A0A0MS03 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV5-3A0A0A0MS03 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.93■□□□□ 0.78
TRBV5-3A0A0A0MS03 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV5-3A0A0A0MS03 DUX4L19-201ENST00000557448 1267 ntBASIC19.93■□□□□ 0.78
TRBV5-3A0A0A0MS03 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.93■□□□□ 0.78
TRBV5-3A0A0A0MS03 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.93■□□□□ 0.78
TRBV5-3A0A0A0MS03 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.93■□□□□ 0.78
TRBV5-3A0A0A0MS03 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV5-3A0A0A0MS03 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV5-3A0A0A0MS03 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms