Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM56-RWDD3S4R434 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.43■□□□□ 0.38
TMEM56-RWDD3S4R434 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM56-RWDD3S4R434 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.43■□□□□ 0.38
TMEM56-RWDD3S4R434 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TMEM56-RWDD3S4R434 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.42■□□□□ 0.38
TMEM56-RWDD3S4R434 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TMEM56-RWDD3S4R434 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM56-RWDD3S4R434 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM56-RWDD3S4R434 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM56-RWDD3S4R434 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.42■□□□□ 0.38
TMEM56-RWDD3S4R434 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM56-RWDD3S4R434 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.42■□□□□ 0.38
TMEM56-RWDD3S4R434 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.42■□□□□ 0.38
TMEM56-RWDD3S4R434 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM56-RWDD3S4R434 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.42■□□□□ 0.38
TMEM56-RWDD3S4R434 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.42■□□□□ 0.38
TMEM56-RWDD3S4R434 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM56-RWDD3S4R434 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TMEM56-RWDD3S4R434 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM56-RWDD3S4R434 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM56-RWDD3S4R434 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
TMEM56-RWDD3S4R434 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM56-RWDD3S4R434 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM56-RWDD3S4R434 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM56-RWDD3S4R434 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM56-RWDD3S4R434 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM56-RWDD3S4R434 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM56-RWDD3S4R434 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM56-RWDD3S4R434 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.42■□□□□ 0.38
TMEM56-RWDD3S4R434 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
TMEM56-RWDD3S4R434 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM56-RWDD3S4R434 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM56-RWDD3S4R434 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM56-RWDD3S4R434 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM56-RWDD3S4R434 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM56-RWDD3S4R434 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM56-RWDD3S4R434 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM56-RWDD3S4R434 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM56-RWDD3S4R434 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM56-RWDD3S4R434 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM56-RWDD3S4R434 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.41■□□□□ 0.38
TMEM56-RWDD3S4R434 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM56-RWDD3S4R434 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TMEM56-RWDD3S4R434 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEM56-RWDD3S4R434 MTDHP2-201ENST00000601468 714 ntBASIC17.41■□□□□ 0.38
TMEM56-RWDD3S4R434 AC012354.3-201ENST00000623734 483 ntBASIC17.41■□□□□ 0.38
TMEM56-RWDD3S4R434 AC068587.7-201ENST00000641602 218 ntBASIC17.41■□□□□ 0.38
TMEM56-RWDD3S4R434 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TMEM56-RWDD3S4R434 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM56-RWDD3S4R434 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM56-RWDD3S4R434 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.41■□□□□ 0.38
TMEM56-RWDD3S4R434 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM56-RWDD3S4R434 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TMEM56-RWDD3S4R434 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TMEM56-RWDD3S4R434 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM56-RWDD3S4R434 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
TMEM56-RWDD3S4R434 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM56-RWDD3S4R434 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TMEM56-RWDD3S4R434 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM56-RWDD3S4R434 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TMEM56-RWDD3S4R434 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM56-RWDD3S4R434 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.4■□□□□ 0.38
TMEM56-RWDD3S4R434 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM56-RWDD3S4R434 AC241377.3-202ENST00000626088 1088 ntBASIC17.4■□□□□ 0.38
TMEM56-RWDD3S4R434 AC241585.3-202ENST00000628937 1088 ntBASIC17.4■□□□□ 0.38
TMEM56-RWDD3S4R434 AC245100.8-202ENST00000629247 1058 ntBASIC17.4■□□□□ 0.38
TMEM56-RWDD3S4R434 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.4■□□□□ 0.38
TMEM56-RWDD3S4R434 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM56-RWDD3S4R434 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM56-RWDD3S4R434 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.4■□□□□ 0.38
TMEM56-RWDD3S4R434 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM56-RWDD3S4R434 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.4■□□□□ 0.38
TMEM56-RWDD3S4R434 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.4■□□□□ 0.38
TMEM56-RWDD3S4R434 AC133637.1-201ENST00000624115 1537 ntBASIC17.4■□□□□ 0.38
TMEM56-RWDD3S4R434 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TMEM56-RWDD3S4R434 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM56-RWDD3S4R434 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM56-RWDD3S4R434 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM56-RWDD3S4R434 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
TMEM56-RWDD3S4R434 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM56-RWDD3S4R434 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TMEM56-RWDD3S4R434 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.4■□□□□ 0.38
TMEM56-RWDD3S4R434 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.4■□□□□ 0.38
TMEM56-RWDD3S4R434 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.4■□□□□ 0.38
TMEM56-RWDD3S4R434 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
TMEM56-RWDD3S4R434 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.38
TMEM56-RWDD3S4R434 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.39■□□□□ 0.38
TMEM56-RWDD3S4R434 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.38
TMEM56-RWDD3S4R434 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM56-RWDD3S4R434 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TMEM56-RWDD3S4R434 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM56-RWDD3S4R434 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.39■□□□□ 0.37
TMEM56-RWDD3S4R434 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM56-RWDD3S4R434 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM56-RWDD3S4R434 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM56-RWDD3S4R434 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.39■□□□□ 0.37
TMEM56-RWDD3S4R434 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TMEM56-RWDD3S4R434 AL033527.3-201ENST00000566366 1196 ntBASIC17.39■□□□□ 0.37
TMEM56-RWDD3S4R434 AL451085.2-201ENST00000605085 799 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms