Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CSNK1G1Q9HCP0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CSNK1G1Q9HCP0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
CSNK1G1Q9HCP0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.44■■□□□ 1.18
CSNK1G1Q9HCP0 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CSNK1G1Q9HCP0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CSNK1G1Q9HCP0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CSNK1G1Q9HCP0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
CSNK1G1Q9HCP0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CSNK1G1Q9HCP0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.44■■□□□ 1.18
CSNK1G1Q9HCP0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.44■■□□□ 1.18
CSNK1G1Q9HCP0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.44■■□□□ 1.18
CSNK1G1Q9HCP0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CSNK1G1Q9HCP0 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.44■■□□□ 1.18
CSNK1G1Q9HCP0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
CSNK1G1Q9HCP0 AC138907.5-202ENST00000569484 235 ntBASIC22.44■■□□□ 1.18
CSNK1G1Q9HCP0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CSNK1G1Q9HCP0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CSNK1G1Q9HCP0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CSNK1G1Q9HCP0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CSNK1G1Q9HCP0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CSNK1G1Q9HCP0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.43■■□□□ 1.18
CSNK1G1Q9HCP0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.43■■□□□ 1.18
CSNK1G1Q9HCP0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CSNK1G1Q9HCP0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.43■■□□□ 1.18
CSNK1G1Q9HCP0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.43■■□□□ 1.18
CSNK1G1Q9HCP0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
CSNK1G1Q9HCP0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CSNK1G1Q9HCP0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CSNK1G1Q9HCP0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.43■■□□□ 1.18
CSNK1G1Q9HCP0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.43■■□□□ 1.18
CSNK1G1Q9HCP0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CSNK1G1Q9HCP0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CSNK1G1Q9HCP0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CSNK1G1Q9HCP0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CSNK1G1Q9HCP0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CSNK1G1Q9HCP0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CSNK1G1Q9HCP0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CSNK1G1Q9HCP0 AL117328.2-201ENST00000624617 1940 ntBASIC22.41■■□□□ 1.18
CSNK1G1Q9HCP0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.41■■□□□ 1.18
CSNK1G1Q9HCP0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
CSNK1G1Q9HCP0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CSNK1G1Q9HCP0 AC137761.2-201ENST00000561729 223 ntBASIC22.41■■□□□ 1.18
CSNK1G1Q9HCP0 AC145350.3-201ENST00000569033 163 ntBASIC22.41■■□□□ 1.18
CSNK1G1Q9HCP0 AL137784.2-201ENST00000607332 1000 ntBASIC22.41■■□□□ 1.18
CSNK1G1Q9HCP0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CSNK1G1Q9HCP0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CSNK1G1Q9HCP0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CSNK1G1Q9HCP0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CSNK1G1Q9HCP0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CSNK1G1Q9HCP0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.4■■□□□ 1.18
CSNK1G1Q9HCP0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
CSNK1G1Q9HCP0 AC010141.2-201ENST00000452426 721 ntBASIC22.4■■□□□ 1.18
CSNK1G1Q9HCP0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.4■■□□□ 1.18
CSNK1G1Q9HCP0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.4■■□□□ 1.18
CSNK1G1Q9HCP0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.4■■□□□ 1.18
CSNK1G1Q9HCP0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.4■■□□□ 1.18
CSNK1G1Q9HCP0 AP001160.3-201ENST00000601484 763 ntBASIC22.4■■□□□ 1.18
CSNK1G1Q9HCP0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CSNK1G1Q9HCP0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CSNK1G1Q9HCP0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CSNK1G1Q9HCP0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CSNK1G1Q9HCP0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.4■■□□□ 1.18
CSNK1G1Q9HCP0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CSNK1G1Q9HCP0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.39■■□□□ 1.17
CSNK1G1Q9HCP0 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.39■■□□□ 1.17
CSNK1G1Q9HCP0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CSNK1G1Q9HCP0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CSNK1G1Q9HCP0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CSNK1G1Q9HCP0 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CSNK1G1Q9HCP0 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CSNK1G1Q9HCP0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CSNK1G1Q9HCP0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.38■■□□□ 1.17
CSNK1G1Q9HCP0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CSNK1G1Q9HCP0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CSNK1G1Q9HCP0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.38■■□□□ 1.17
CSNK1G1Q9HCP0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CSNK1G1Q9HCP0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.38■■□□□ 1.17
CSNK1G1Q9HCP0 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
CSNK1G1Q9HCP0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.38■■□□□ 1.17
CSNK1G1Q9HCP0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
CSNK1G1Q9HCP0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CSNK1G1Q9HCP0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.37■■□□□ 1.17
CSNK1G1Q9HCP0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CSNK1G1Q9HCP0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.37■■□□□ 1.17
CSNK1G1Q9HCP0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CSNK1G1Q9HCP0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.37■■□□□ 1.17
CSNK1G1Q9HCP0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.37■■□□□ 1.17
CSNK1G1Q9HCP0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.37■■□□□ 1.17
CSNK1G1Q9HCP0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.37■■□□□ 1.17
CSNK1G1Q9HCP0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CSNK1G1Q9HCP0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CSNK1G1Q9HCP0 AC010542.4-201ENST00000563151 1910 ntBASIC22.37■■□□□ 1.17
CSNK1G1Q9HCP0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CSNK1G1Q9HCP0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
CSNK1G1Q9HCP0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
CSNK1G1Q9HCP0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CSNK1G1Q9HCP0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CSNK1G1Q9HCP0 AC016769.1-201ENST00000409132 1010 ntBASIC22.36■■□□□ 1.17
CSNK1G1Q9HCP0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms