Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VCX3BQ9H321 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
VCX3BQ9H321 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VCX3BQ9H321 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.29■□□□□ 0.84
VCX3BQ9H321 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.28■□□□□ 0.84
VCX3BQ9H321 GABARAPL3-202ENST00000624044 1851 ntBASIC20.28■□□□□ 0.84
VCX3BQ9H321 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VCX3BQ9H321 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.28■□□□□ 0.84
VCX3BQ9H321 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
VCX3BQ9H321 AC007029.1-201ENST00000604183 313 ntBASIC20.28■□□□□ 0.84
VCX3BQ9H321 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
VCX3BQ9H321 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VCX3BQ9H321 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VCX3BQ9H321 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.28■□□□□ 0.84
VCX3BQ9H321 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
VCX3BQ9H321 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VCX3BQ9H321 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VCX3BQ9H321 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
VCX3BQ9H321 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.27■□□□□ 0.84
VCX3BQ9H321 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
VCX3BQ9H321 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VCX3BQ9H321 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
VCX3BQ9H321 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VCX3BQ9H321 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VCX3BQ9H321 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
VCX3BQ9H321 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.27■□□□□ 0.84
VCX3BQ9H321 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
VCX3BQ9H321 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.27■□□□□ 0.83
VCX3BQ9H321 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
VCX3BQ9H321 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
VCX3BQ9H321 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
VCX3BQ9H321 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
VCX3BQ9H321 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VCX3BQ9H321 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
VCX3BQ9H321 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VCX3BQ9H321 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
VCX3BQ9H321 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VCX3BQ9H321 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.26■□□□□ 0.83
VCX3BQ9H321 AC011551.1-201ENST00000614101 683 ntBASIC20.26■□□□□ 0.83
VCX3BQ9H321 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
VCX3BQ9H321 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
VCX3BQ9H321 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
VCX3BQ9H321 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
VCX3BQ9H321 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VCX3BQ9H321 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.25■□□□□ 0.83
VCX3BQ9H321 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.25■□□□□ 0.83
VCX3BQ9H321 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
VCX3BQ9H321 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VCX3BQ9H321 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VCX3BQ9H321 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
VCX3BQ9H321 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
VCX3BQ9H321 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.25■□□□□ 0.83
VCX3BQ9H321 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.25■□□□□ 0.83
VCX3BQ9H321 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.25■□□□□ 0.83
VCX3BQ9H321 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VCX3BQ9H321 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
VCX3BQ9H321 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VCX3BQ9H321 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.25■□□□□ 0.83
VCX3BQ9H321 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VCX3BQ9H321 HCG11-201ENST00000411553 5696 ntBASIC20.25■□□□□ 0.83
VCX3BQ9H321 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
VCX3BQ9H321 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VCX3BQ9H321 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VCX3BQ9H321 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.24■□□□□ 0.83
VCX3BQ9H321 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VCX3BQ9H321 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
VCX3BQ9H321 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VCX3BQ9H321 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
VCX3BQ9H321 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
VCX3BQ9H321 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VCX3BQ9H321 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VCX3BQ9H321 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.24■□□□□ 0.83
VCX3BQ9H321 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
VCX3BQ9H321 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
VCX3BQ9H321 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VCX3BQ9H321 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
VCX3BQ9H321 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
VCX3BQ9H321 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VCX3BQ9H321 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VCX3BQ9H321 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.23■□□□□ 0.83
VCX3BQ9H321 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
VCX3BQ9H321 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VCX3BQ9H321 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
VCX3BQ9H321 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VCX3BQ9H321 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VCX3BQ9H321 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
VCX3BQ9H321 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
VCX3BQ9H321 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.23■□□□□ 0.83
VCX3BQ9H321 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
VCX3BQ9H321 CA15P2-201ENST00000611168 834 ntBASIC20.23■□□□□ 0.83
VCX3BQ9H321 CR559946.2-201ENST00000623684 991 ntBASIC20.23■□□□□ 0.83
VCX3BQ9H321 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.23■□□□□ 0.83
VCX3BQ9H321 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VCX3BQ9H321 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.23■□□□□ 0.83
VCX3BQ9H321 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VCX3BQ9H321 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VCX3BQ9H321 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.23■□□□□ 0.83
VCX3BQ9H321 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
VCX3BQ9H321 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
VCX3BQ9H321 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms