RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 DCAF8L2P0C7V8 631 aa31.9■■■□□ 2.7
HCG11-201ENST00000411553 SUPT5HO00267 1087 aaKnown RBP30.05■■■□□ 2.4
HCG11-201ENST00000411553 SHROOM4Q9ULL8 1493 aa29.37■■■□□ 2.29
HCG11-201ENST00000411553 NISCHQ9Y2I1 1504 aa29.37■■■□□ 2.29
HCG11-201ENST00000411553 EHMT2Q96KQ7 1210 aa29.3■■■□□ 2.28
HCG11-201ENST00000411553 PELP1Q8IZL8 1130 aaKnown RBP29.05■■■□□ 2.24
HCG11-201ENST00000411553 APLP2Q06481 763 aa28.99■■■□□ 2.23
HCG11-201ENST00000411553 FAM9AQ8IZU1 332 aaPredicted RBP28.72■■■□□ 2.19
HCG11-201ENST00000411553 TTBK1Q5TCY1 1321 aaPredicted RBP28.32■■■□□ 2.12
HCG11-201ENST00000411553 RANGAP1P46060 587 aaPredicted RBP28.09■■■□□ 2.09
HCG11-201ENST00000411553 PCGF6Q9BYE7 350 aa28.04■■■□□ 2.08
HCG11-201ENST00000411553 ATP1B4Q9UN42 357 aaPredicted RBP27.98■■■□□ 2.07
HCG11-201ENST00000411553 ERICH6Q7L0X2 663 aa27.85■■■□□ 2.05
HCG11-201ENST00000411553 TRIM41Q8WV44 630 aa27.84■■■□□ 2.05
HCG11-201ENST00000411553 CENPBP07199 599 aaPredicted RBP27.78■■■□□ 2.04
HCG11-201ENST00000411553 CCER1Q8TC90 406 aaPredicted RBP27.78■■■□□ 2.04
HCG11-201ENST00000411553 ZEB1P37275 1124 aaPredicted RBP27.72■■■□□ 2.03
HCG11-201ENST00000411553 UBTFP17480 764 aaKnown RBP27.67■■■□□ 2.02
HCG11-201ENST00000411553 NEFLP07196 543 aa27.4■■□□□ 1.98
HCG11-201ENST00000411553 YTHDC1Q96MU7 727 aaKnown RBP27.18■■□□□ 1.94
HCG11-201ENST00000411553 MYT1LQ9UL68 1186 aa27.1■■□□□ 1.93
HCG11-201ENST00000411553 PPARGC1BQ86YN6 1023 aaKnown RBP27.03■■□□□ 1.92
HCG11-201ENST00000411553 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27■■□□□ 1.91
HCG11-201ENST00000411553 HNRNPUL2Q1KMD3 747 aaKnown RBP27■■□□□ 1.91
HCG11-201ENST00000411553 ITGAEP38570 1179 aa26.85■■□□□ 1.89
HCG11-201ENST00000411553 POLR3GLQ9BT43 218 aa26.85■■□□□ 1.89
HCG11-201ENST00000411553 TRIM26Q12899 539 aaPredicted RBP26.76■■□□□ 1.87
HCG11-201ENST00000411553 DAXXQ9UER7 740 aaPredicted RBP26.75■■□□□ 1.87
HCG11-201ENST00000411553 MYT1Q01538 1121 aa26.55■■□□□ 1.84
HCG11-201ENST00000411553 CHIC1Q5VXU3 224 aa26.55■■□□□ 1.84
HCG11-201ENST00000411553 CNGB1Q14028 1251 aaPredicted RBP26.52■■□□□ 1.84
HCG11-201ENST00000411553 SLC4A1APQ9BWU0 796 aaKnown RBP26.48■■□□□ 1.83
HCG11-201ENST00000411553 HRCP23327 699 aa26.4■■□□□ 1.82
HCG11-201ENST00000411553 LOC105371045A0A1W2PR82 267 aa26.34■■□□□ 1.81
HCG11-201ENST00000411553 CLSPNQ9HAW4 1339 aa26.16■■□□□ 1.78
HCG11-201ENST00000411553 FAM50AQ14320 339 aaKnown RBP26.15■■□□□ 1.78
HCG11-201ENST00000411553 TRIM52Q96A61 297 aa26.1■■□□□ 1.77
HCG11-201ENST00000411553 ZNF316A6NFI3 1004 aaPredicted RBP26.08■■□□□ 1.77
HCG11-201ENST00000411553 RTL5Q5HYW3 569 aaPredicted RBP25.95■■□□□ 1.75
HCG11-201ENST00000411553 DIEXFQ68CQ4 756 aaKnown RBP25.91■■□□□ 1.74
HCG11-201ENST00000411553 PABPN1Q86U42 306 aaKnown RBP eCLIP25.91■■□□□ 1.74
HCG11-201ENST00000411553 NEUROD1Q13562 356 aa25.89■■□□□ 1.74
HCG11-201ENST00000411553 ZNF326Q5BKZ1 582 aaKnown RBP25.81■■□□□ 1.72
HCG11-201ENST00000411553 FBLN2P98095 1184 aa25.79■■□□□ 1.72
HCG11-201ENST00000411553 ZBTB47Q9UFB7 747 aaPredicted RBP25.77■■□□□ 1.72
HCG11-201ENST00000411553 ABCC9O60706 1549 aa25.75■■□□□ 1.71
HCG11-201ENST00000411553 ANP32CO43423 234 aa25.67■■□□□ 1.7
HCG11-201ENST00000411553 SLC24A1O60721 1099 aa25.63■■□□□ 1.69
HCG11-201ENST00000411553 BCANQ96GW7 911 aa25.61■■□□□ 1.69
HCG11-201ENST00000411553 NEFMP07197 916 aa25.56■■□□□ 1.68
HCG11-201ENST00000411553 CANXP27824 592 aaKnown RBP25.54■■□□□ 1.68
HCG11-201ENST00000411553 CDK11AQ9UQ88 783 aaPredicted RBP25.46■■□□□ 1.67
HCG11-201ENST00000411553 BCL11AQ9H165 835 aa25.46■■□□□ 1.67
HCG11-201ENST00000411553 ARID3CA6NKF2 412 aa25.43■■□□□ 1.66
HCG11-201ENST00000411553 P3H3Q8IVL6 736 aa25.41■■□□□ 1.66
HCG11-201ENST00000411553 ZNF777Q9ULD5 760 aaPredicted RBP25.36■■□□□ 1.65
HCG11-201ENST00000411553 ESF1Q9H501 851 aaKnown RBP25.3■■□□□ 1.64
HCG11-201ENST00000411553 GTF3C3Q9Y5Q9 886 aa25.27■■□□□ 1.64
HCG11-201ENST00000411553 CSRNP3Q8WYN3 585 aa25.21■■□□□ 1.63
HCG11-201ENST00000411553 STAG3Q9UJ98 1225 aa25.15■■□□□ 1.62
HCG11-201ENST00000411553 CHGAP10645 457 aaKnown RBP25.11■■□□□ 1.61
HCG11-201ENST00000411553 ANP32AP39687 249 aaKnown RBP25.08■■□□□ 1.61
HCG11-201ENST00000411553 NPM1P06748 294 aaKnown RBP eCLIP25.04■■□□□ 1.6
HCG11-201ENST00000411553 PLPPR3Q6T4P5 718 aa25.01■■□□□ 1.59
HCG11-201ENST00000411553 TONSLQ96HA7 1378 aa24.97■■□□□ 1.59
HCG11-201ENST00000411553 NPM2Q86SE8 214 aaKnown RBP24.97■■□□□ 1.59
HCG11-201ENST00000411553 HSP90AA1P07900 732 aaKnown RBP24.89■■□□□ 1.58
HCG11-201ENST00000411553 ANP32BQ92688 251 aaKnown RBP24.85■■□□□ 1.57
HCG11-201ENST00000411553 UPF2Q9HAU5 1272 aaKnown RBP24.84■■□□□ 1.57
HCG11-201ENST00000411553 ACIN1Q9UKV3 1341 aaKnown RBP24.81■■□□□ 1.56
HCG11-201ENST00000411553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.8■■□□□ 1.56
HCG11-201ENST00000411553 HNRNPUQ00839 825 aaKnown RBP eCLIP24.78■■□□□ 1.56
HCG11-201ENST00000411553 FAM9BQ8IZU0 186 aa24.78■■□□□ 1.56
HCG11-201ENST00000411553 FKBP8Q14318 412 aa24.75■■□□□ 1.55
HCG11-201ENST00000411553 CHIC2Q9UKJ5 165 aa24.74■■□□□ 1.55
HCG11-201ENST00000411553 SCRIBQ14160 1630 aa24.73■■□□□ 1.55
HCG11-201ENST00000411553 SALL2Q9Y467 1007 aaPredicted RBP24.72■■□□□ 1.55
HCG11-201ENST00000411553 DDX10Q13206 875 aaKnown RBP24.7■■□□□ 1.54
HCG11-201ENST00000411553 TSPY4P0CV99 314 aa24.69■■□□□ 1.54
HCG11-201ENST00000411553 TSPY10P0CW01 314 aa24.69■■□□□ 1.54
HCG11-201ENST00000411553 TMC1Q8TDI8 760 aa24.69■■□□□ 1.54
HCG11-201ENST00000411553 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.67■■□□□ 1.54
HCG11-201ENST00000411553 WDR43Q15061 677 aaKnown RBP eCLIP24.66■■□□□ 1.54
HCG11-201ENST00000411553 SCAF1Q9H7N4 1312 aaKnown RBP24.63■■□□□ 1.53
HCG11-201ENST00000411553 KDM2AQ9Y2K7 1162 aa24.61■■□□□ 1.53
HCG11-201ENST00000411553 CHMP7Q8WUX9 453 aaPredicted RBP24.56■■□□□ 1.52
HCG11-201ENST00000411553 CCDC136Q96JN2 1154 aa24.55■■□□□ 1.52
HCG11-201ENST00000411553 MTUS2Q5JR59 1369 aa24.54■■□□□ 1.52
HCG11-201ENST00000411553 A0A0G2JS52 829 aa24.52■■□□□ 1.52
HCG11-201ENST00000411553 MRS2Q9HD23 443 aa24.5■■□□□ 1.51
HCG11-201ENST00000411553 MYH16Q9H6N6 1097 aa24.48■■□□□ 1.51
HCG11-201ENST00000411553 EIF5BO60841 1220 aaKnown RBP24.44■■□□□ 1.5
HCG11-201ENST00000411553 ZBTB7CA1YPR0 619 aa24.44■■□□□ 1.5
HCG11-201ENST00000411553 PPP1R15AO75807 674 aaPredicted RBP24.44■■□□□ 1.5
HCG11-201ENST00000411553 C14orf37Q86TY3 774 aa24.41■■□□□ 1.5
HCG11-201ENST00000411553 PLEKHG5O94827 1062 aa24.36■■□□□ 1.49
HCG11-201ENST00000411553 KCNH8Q96L42 1107 aa24.35■■□□□ 1.49
HCG11-201ENST00000411553 SENP3Q9H4L4 574 aaPredicted RBP24.34■■□□□ 1.49
HCG11-201ENST00000411553 EIF4G2P78344 907 aaKnown RBP eCLIP24.33■■□□□ 1.48
HCG11-201ENST00000411553 RRP7BPQ9NSQ0 103 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms