Protein–RNA interactions for Protein: Q9NST1

PNPLA3, Patatin-like phospholipase domain-containing protein 3, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNPLA3Q9NST1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PNPLA3Q9NST1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PNPLA3Q9NST1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.4■□□□□ 0.86
PNPLA3Q9NST1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PNPLA3Q9NST1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PNPLA3Q9NST1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PNPLA3Q9NST1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
PNPLA3Q9NST1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.4■□□□□ 0.86
PNPLA3Q9NST1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.4■□□□□ 0.86
PNPLA3Q9NST1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.4■□□□□ 0.86
PNPLA3Q9NST1 AF213884.3-201ENST00000563833 479 ntBASIC20.4■□□□□ 0.86
PNPLA3Q9NST1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.4■□□□□ 0.86
PNPLA3Q9NST1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PNPLA3Q9NST1 AL157384.1-201ENST00000445995 2473 ntBASIC20.39■□□□□ 0.86
PNPLA3Q9NST1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.39■□□□□ 0.86
PNPLA3Q9NST1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PNPLA3Q9NST1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PNPLA3Q9NST1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PNPLA3Q9NST1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.39■□□□□ 0.86
PNPLA3Q9NST1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PNPLA3Q9NST1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PNPLA3Q9NST1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PNPLA3Q9NST1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PNPLA3Q9NST1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PNPLA3Q9NST1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PNPLA3Q9NST1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PNPLA3Q9NST1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PNPLA3Q9NST1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PNPLA3Q9NST1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PNPLA3Q9NST1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PNPLA3Q9NST1 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.39■□□□□ 0.85
PNPLA3Q9NST1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.39■□□□□ 0.85
PNPLA3Q9NST1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PNPLA3Q9NST1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PNPLA3Q9NST1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.39■□□□□ 0.85
PNPLA3Q9NST1 MIR4767-201ENST00000582827 78 ntBASIC20.39■□□□□ 0.85
PNPLA3Q9NST1 AL136967.2-201ENST00000623968 743 ntBASIC20.39■□□□□ 0.85
PNPLA3Q9NST1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.39■□□□□ 0.85
PNPLA3Q9NST1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PNPLA3Q9NST1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PNPLA3Q9NST1 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PNPLA3Q9NST1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PNPLA3Q9NST1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PNPLA3Q9NST1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PNPLA3Q9NST1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.38■□□□□ 0.85
PNPLA3Q9NST1 C17orf82-201ENST00000623772 1530 ntBASIC20.38■□□□□ 0.85
PNPLA3Q9NST1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.38■□□□□ 0.85
PNPLA3Q9NST1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PNPLA3Q9NST1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PNPLA3Q9NST1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
PNPLA3Q9NST1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PNPLA3Q9NST1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PNPLA3Q9NST1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.38■□□□□ 0.85
PNPLA3Q9NST1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.38■□□□□ 0.85
PNPLA3Q9NST1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
PNPLA3Q9NST1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.38■□□□□ 0.85
PNPLA3Q9NST1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.38■□□□□ 0.85
PNPLA3Q9NST1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PNPLA3Q9NST1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PNPLA3Q9NST1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PNPLA3Q9NST1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.38■□□□□ 0.85
PNPLA3Q9NST1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PNPLA3Q9NST1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PNPLA3Q9NST1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PNPLA3Q9NST1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PNPLA3Q9NST1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
PNPLA3Q9NST1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PNPLA3Q9NST1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PNPLA3Q9NST1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PNPLA3Q9NST1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PNPLA3Q9NST1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PNPLA3Q9NST1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
PNPLA3Q9NST1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
PNPLA3Q9NST1 AP001330.3-201ENST00000520123 633 ntBASIC20.37■□□□□ 0.85
PNPLA3Q9NST1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.37■□□□□ 0.85
PNPLA3Q9NST1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
PNPLA3Q9NST1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PNPLA3Q9NST1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
PNPLA3Q9NST1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.36■□□□□ 0.85
PNPLA3Q9NST1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PNPLA3Q9NST1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PNPLA3Q9NST1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PNPLA3Q9NST1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.36■□□□□ 0.85
PNPLA3Q9NST1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PNPLA3Q9NST1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PNPLA3Q9NST1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PNPLA3Q9NST1 MIR939-201ENST00000401314 82 ntBASIC20.36■□□□□ 0.85
PNPLA3Q9NST1 AC105265.2-201ENST00000467189 838 ntBASIC20.36■□□□□ 0.85
PNPLA3Q9NST1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.36■□□□□ 0.85
PNPLA3Q9NST1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.36■□□□□ 0.85
PNPLA3Q9NST1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PNPLA3Q9NST1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PNPLA3Q9NST1 AC244015.2-201ENST00000616358 1861 ntBASIC20.36■□□□□ 0.85
PNPLA3Q9NST1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PNPLA3Q9NST1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PNPLA3Q9NST1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PNPLA3Q9NST1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PNPLA3Q9NST1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
PNPLA3Q9NST1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
PNPLA3Q9NST1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms