Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
ITM2AO43736 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ITM2AO43736 AC006455.2-201ENST00000429931 906 ntBASIC20.99■□□□□ 0.95
ITM2AO43736 TSPY9P-201ENST00000440215 945 ntBASIC20.99■□□□□ 0.95
ITM2AO43736 TSPY11P-201ENST00000442607 1045 ntBASIC20.99■□□□□ 0.95
ITM2AO43736 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ITM2AO43736 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.99■□□□□ 0.95
ITM2AO43736 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ITM2AO43736 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
ITM2AO43736 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.98■□□□□ 0.95
ITM2AO43736 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ITM2AO43736 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ITM2AO43736 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
ITM2AO43736 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.98■□□□□ 0.95
ITM2AO43736 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
ITM2AO43736 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.97■□□□□ 0.95
ITM2AO43736 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ITM2AO43736 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ITM2AO43736 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ITM2AO43736 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.97■□□□□ 0.95
ITM2AO43736 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ITM2AO43736 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ITM2AO43736 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.97■□□□□ 0.95
ITM2AO43736 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.97■□□□□ 0.95
ITM2AO43736 AC239859.2-201ENST00000444165 318 ntBASIC20.97■□□□□ 0.95
ITM2AO43736 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.97■□□□□ 0.95
ITM2AO43736 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ITM2AO43736 AL117332.1-201ENST00000622628 974 ntBASIC20.97■□□□□ 0.95
ITM2AO43736 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ITM2AO43736 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ITM2AO43736 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ITM2AO43736 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ITM2AO43736 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.97■□□□□ 0.95
ITM2AO43736 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.97■□□□□ 0.95
ITM2AO43736 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ITM2AO43736 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ITM2AO43736 LINC01006-201ENST00000333319 2292 ntBASIC20.97■□□□□ 0.95
ITM2AO43736 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.97■□□□□ 0.95
ITM2AO43736 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ITM2AO43736 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.96■□□□□ 0.95
ITM2AO43736 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ITM2AO43736 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ITM2AO43736 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ITM2AO43736 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ITM2AO43736 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
ITM2AO43736 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
ITM2AO43736 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.96■□□□□ 0.95
ITM2AO43736 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ITM2AO43736 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ITM2AO43736 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ITM2AO43736 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ITM2AO43736 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
ITM2AO43736 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
ITM2AO43736 pRNA.6-201ENST00000610482 90 ntBASIC20.95■□□□□ 0.94
ITM2AO43736 pRNA.5-201ENST00000612139 90 ntBASIC20.95■□□□□ 0.94
ITM2AO43736 pRNA.11-201ENST00000618423 90 ntBASIC20.95■□□□□ 0.94
ITM2AO43736 pRNA.13-201ENST00000619112 90 ntBASIC20.95■□□□□ 0.94
ITM2AO43736 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ITM2AO43736 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ITM2AO43736 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ITM2AO43736 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ITM2AO43736 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ITM2AO43736 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ITM2AO43736 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ITM2AO43736 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ITM2AO43736 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.94■□□□□ 0.94
ITM2AO43736 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ITM2AO43736 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ITM2AO43736 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ITM2AO43736 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ITM2AO43736 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
ITM2AO43736 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.94■□□□□ 0.94
ITM2AO43736 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ITM2AO43736 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
ITM2AO43736 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.94■□□□□ 0.94
ITM2AO43736 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ITM2AO43736 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
ITM2AO43736 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ITM2AO43736 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ITM2AO43736 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ITM2AO43736 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ITM2AO43736 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ITM2AO43736 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ITM2AO43736 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ITM2AO43736 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ITM2AO43736 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ITM2AO43736 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.93■□□□□ 0.94
ITM2AO43736 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.93■□□□□ 0.94
ITM2AO43736 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
ITM2AO43736 AC241377.3-202ENST00000626088 1088 ntBASIC20.93■□□□□ 0.94
ITM2AO43736 AC241585.3-202ENST00000628937 1088 ntBASIC20.93■□□□□ 0.94
ITM2AO43736 AC245100.8-202ENST00000629247 1058 ntBASIC20.93■□□□□ 0.94
ITM2AO43736 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ITM2AO43736 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ITM2AO43736 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.92■□□□□ 0.94
ITM2AO43736 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ITM2AO43736 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.92■□□□□ 0.94
ITM2AO43736 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.92■□□□□ 0.94
ITM2AO43736 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
ITM2AO43736 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms