Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 KRT125P-201ENST00000546827 989 ntBASIC14.6□□□□□ -0.07
NDUFA1O15239 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFA1O15239 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC14.6□□□□□ -0.07
NDUFA1O15239 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFA1O15239 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFA1O15239 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NDUFA1O15239 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFA1O15239 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
NDUFA1O15239 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFA1O15239 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC14.59□□□□□ -0.07
NDUFA1O15239 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC14.59□□□□□ -0.07
NDUFA1O15239 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFA1O15239 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFA1O15239 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFA1O15239 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFA1O15239 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFA1O15239 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFA1O15239 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC14.59□□□□□ -0.07
NDUFA1O15239 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NDUFA1O15239 AC009086.3-201ENST00000623486 1008 ntBASIC14.59□□□□□ -0.07
NDUFA1O15239 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFA1O15239 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFA1O15239 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFA1O15239 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFA1O15239 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC14.59□□□□□ -0.07
NDUFA1O15239 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFA1O15239 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC14.59□□□□□ -0.07
NDUFA1O15239 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
NDUFA1O15239 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC14.59□□□□□ -0.07
NDUFA1O15239 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NDUFA1O15239 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.07
NDUFA1O15239 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC14.58□□□□□ -0.07
NDUFA1O15239 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NDUFA1O15239 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NDUFA1O15239 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC14.58□□□□□ -0.07
NDUFA1O15239 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC14.58□□□□□ -0.07
NDUFA1O15239 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NDUFA1O15239 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC14.58□□□□□ -0.08
NDUFA1O15239 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFA1O15239 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC14.58□□□□□ -0.08
NDUFA1O15239 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
NDUFA1O15239 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
NDUFA1O15239 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC14.58□□□□□ -0.08
NDUFA1O15239 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFA1O15239 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC14.58□□□□□ -0.08
NDUFA1O15239 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFA1O15239 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFA1O15239 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFA1O15239 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFA1O15239 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
NDUFA1O15239 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NDUFA1O15239 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NDUFA1O15239 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NDUFA1O15239 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC14.57□□□□□ -0.08
NDUFA1O15239 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NDUFA1O15239 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NDUFA1O15239 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC14.57□□□□□ -0.08
NDUFA1O15239 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NDUFA1O15239 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NDUFA1O15239 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NDUFA1O15239 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NDUFA1O15239 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NDUFA1O15239 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NDUFA1O15239 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC14.57□□□□□ -0.08
NDUFA1O15239 MTDHP2-201ENST00000601468 714 ntBASIC14.57□□□□□ -0.08
NDUFA1O15239 CA15P2-201ENST00000611168 834 ntBASIC14.57□□□□□ -0.08
NDUFA1O15239 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC14.57□□□□□ -0.08
NDUFA1O15239 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NDUFA1O15239 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NDUFA1O15239 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
NDUFA1O15239 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NDUFA1O15239 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NDUFA1O15239 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
NDUFA1O15239 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC14.57□□□□□ -0.08
NDUFA1O15239 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC14.57□□□□□ -0.08
NDUFA1O15239 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
NDUFA1O15239 ME2-206ENST00000638410 2289 ntTSL 5 BASIC14.57□□□□□ -0.08
NDUFA1O15239 ME2-210ENST00000639255 2262 ntTSL 5 BASIC14.57□□□□□ -0.08
NDUFA1O15239 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC14.57□□□□□ -0.08
NDUFA1O15239 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NDUFA1O15239 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFA1O15239 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFA1O15239 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFA1O15239 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFA1O15239 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
NDUFA1O15239 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFA1O15239 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC14.56□□□□□ -0.08
NDUFA1O15239 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFA1O15239 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFA1O15239 RNF146-205ENST00000477776 762 ntTSL 3 BASIC14.56□□□□□ -0.08
NDUFA1O15239 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFA1O15239 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC14.56□□□□□ -0.08
NDUFA1O15239 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NDUFA1O15239 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
NDUFA1O15239 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFA1O15239 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
NDUFA1O15239 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFA1O15239 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC14.56□□□□□ -0.08
NDUFA1O15239 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFA1O15239 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms