Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.75■□□□□ 0.91
LINC01555Q8NAE3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.75■□□□□ 0.91
LINC01555Q8NAE3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.75■□□□□ 0.91
LINC01555Q8NAE3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LINC01555Q8NAE3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.75■□□□□ 0.91
LINC01555Q8NAE3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
LINC01555Q8NAE3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.75■□□□□ 0.91
LINC01555Q8NAE3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LINC01555Q8NAE3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LINC01555Q8NAE3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.75■□□□□ 0.91
LINC01555Q8NAE3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
LINC01555Q8NAE3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
LINC01555Q8NAE3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.74■□□□□ 0.91
LINC01555Q8NAE3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LINC01555Q8NAE3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
LINC01555Q8NAE3 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LINC01555Q8NAE3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LINC01555Q8NAE3 KRT18P14-201ENST00000534205 1250 ntBASIC20.74■□□□□ 0.91
LINC01555Q8NAE3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.74■□□□□ 0.91
LINC01555Q8NAE3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
LINC01555Q8NAE3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
LINC01555Q8NAE3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
LINC01555Q8NAE3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LINC01555Q8NAE3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
LINC01555Q8NAE3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC01555Q8NAE3 AP006587.3-201ENST00000525742 1516 ntBASIC20.73■□□□□ 0.91
LINC01555Q8NAE3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LINC01555Q8NAE3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC01555Q8NAE3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC01555Q8NAE3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.73■□□□□ 0.91
LINC01555Q8NAE3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.73■□□□□ 0.91
LINC01555Q8NAE3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.73■□□□□ 0.91
LINC01555Q8NAE3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.73■□□□□ 0.91
LINC01555Q8NAE3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
LINC01555Q8NAE3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
LINC01555Q8NAE3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
LINC01555Q8NAE3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.73■□□□□ 0.91
LINC01555Q8NAE3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC01555Q8NAE3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC01555Q8NAE3 AC026471.6-201ENST00000622954 1905 ntBASIC20.72■□□□□ 0.91
LINC01555Q8NAE3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LINC01555Q8NAE3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LINC01555Q8NAE3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINC01555Q8NAE3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINC01555Q8NAE3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
LINC01555Q8NAE3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.72■□□□□ 0.91
LINC01555Q8NAE3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.72■□□□□ 0.91
LINC01555Q8NAE3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.72■□□□□ 0.91
LINC01555Q8NAE3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LINC01555Q8NAE3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LINC01555Q8NAE3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINC01555Q8NAE3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINC01555Q8NAE3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINC01555Q8NAE3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINC01555Q8NAE3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.71■□□□□ 0.91
LINC01555Q8NAE3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LINC01555Q8NAE3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.71■□□□□ 0.91
LINC01555Q8NAE3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.71■□□□□ 0.91
LINC01555Q8NAE3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.71■□□□□ 0.91
LINC01555Q8NAE3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.71■□□□□ 0.91
LINC01555Q8NAE3 MIR5787-201ENST00000611784 55 ntBASIC20.71■□□□□ 0.91
LINC01555Q8NAE3 FAM99A-202ENST00000538190 1989 ntBASIC20.71■□□□□ 0.91
LINC01555Q8NAE3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINC01555Q8NAE3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.71■□□□□ 0.91
LINC01555Q8NAE3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.7■□□□□ 0.91
LINC01555Q8NAE3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.7■□□□□ 0.9
LINC01555Q8NAE3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LINC01555Q8NAE3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC01555Q8NAE3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LINC01555Q8NAE3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC01555Q8NAE3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.7■□□□□ 0.9
LINC01555Q8NAE3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LINC01555Q8NAE3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.7■□□□□ 0.9
LINC01555Q8NAE3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
LINC01555Q8NAE3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.7■□□□□ 0.9
LINC01555Q8NAE3 AC034268.1-201ENST00000441047 882 ntBASIC20.7■□□□□ 0.9
LINC01555Q8NAE3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.7■□□□□ 0.9
LINC01555Q8NAE3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
LINC01555Q8NAE3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.7■□□□□ 0.9
LINC01555Q8NAE3 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.7■□□□□ 0.9
LINC01555Q8NAE3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
LINC01555Q8NAE3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC01555Q8NAE3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.7■□□□□ 0.9
LINC01555Q8NAE3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC01555Q8NAE3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC01555Q8NAE3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
LINC01555Q8NAE3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LINC01555Q8NAE3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.69■□□□□ 0.9
LINC01555Q8NAE3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LINC01555Q8NAE3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LINC01555Q8NAE3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.69■□□□□ 0.9
LINC01555Q8NAE3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LINC01555Q8NAE3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LINC01555Q8NAE3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
LINC01555Q8NAE3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC01555Q8NAE3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC01555Q8NAE3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC01555Q8NAE3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LINC01555Q8NAE3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.69■□□□□ 0.9
LINC01555Q8NAE3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms