Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC71LQ8N9Z2 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC71LQ8N9Z2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC71LQ8N9Z2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC71LQ8N9Z2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC71LQ8N9Z2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC71LQ8N9Z2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC71LQ8N9Z2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC71LQ8N9Z2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC71LQ8N9Z2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC71LQ8N9Z2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC71LQ8N9Z2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.82■□□□□ 0.44
CCDC71LQ8N9Z2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.82■□□□□ 0.44
CCDC71LQ8N9Z2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC71LQ8N9Z2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.82■□□□□ 0.44
CCDC71LQ8N9Z2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC71LQ8N9Z2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC71LQ8N9Z2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.82■□□□□ 0.44
CCDC71LQ8N9Z2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC71LQ8N9Z2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC71LQ8N9Z2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CCDC71LQ8N9Z2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC71LQ8N9Z2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC71LQ8N9Z2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC71LQ8N9Z2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC71LQ8N9Z2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
CCDC71LQ8N9Z2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC71LQ8N9Z2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC71LQ8N9Z2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC71LQ8N9Z2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC71LQ8N9Z2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC71LQ8N9Z2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
CCDC71LQ8N9Z2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC71LQ8N9Z2 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC71LQ8N9Z2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC71LQ8N9Z2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC71LQ8N9Z2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC71LQ8N9Z2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CCDC71LQ8N9Z2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
CCDC71LQ8N9Z2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC71LQ8N9Z2 TSPY13P-201ENST00000338964 914 ntBASIC17.81■□□□□ 0.44
CCDC71LQ8N9Z2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.81■□□□□ 0.44
CCDC71LQ8N9Z2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC71LQ8N9Z2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC71LQ8N9Z2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC71LQ8N9Z2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC71LQ8N9Z2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC71LQ8N9Z2 AC073130.3-201ENST00000624389 2278 ntBASIC17.81■□□□□ 0.44
CCDC71LQ8N9Z2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC71LQ8N9Z2 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CCDC71LQ8N9Z2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC71LQ8N9Z2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC71LQ8N9Z2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC71LQ8N9Z2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC71LQ8N9Z2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC71LQ8N9Z2 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC71LQ8N9Z2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC71LQ8N9Z2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC71LQ8N9Z2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC71LQ8N9Z2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CCDC71LQ8N9Z2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
CCDC71LQ8N9Z2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC71LQ8N9Z2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC71LQ8N9Z2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC71LQ8N9Z2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC71LQ8N9Z2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC71LQ8N9Z2 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CCDC71LQ8N9Z2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC71LQ8N9Z2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC71LQ8N9Z2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC71LQ8N9Z2 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC71LQ8N9Z2 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC71LQ8N9Z2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC71LQ8N9Z2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC71LQ8N9Z2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC71LQ8N9Z2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CCDC71LQ8N9Z2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC71LQ8N9Z2 YBX1P4-201ENST00000392794 808 ntBASIC17.79■□□□□ 0.44
CCDC71LQ8N9Z2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC71LQ8N9Z2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC71LQ8N9Z2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CCDC71LQ8N9Z2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.79■□□□□ 0.44
CCDC71LQ8N9Z2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC71LQ8N9Z2 LINC01521-201ENST00000504184 1943 ntBASIC17.78■□□□□ 0.44
CCDC71LQ8N9Z2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.78■□□□□ 0.44
CCDC71LQ8N9Z2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC71LQ8N9Z2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC71LQ8N9Z2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC71LQ8N9Z2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.78■□□□□ 0.44
CCDC71LQ8N9Z2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CCDC71LQ8N9Z2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC71LQ8N9Z2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.78■□□□□ 0.44
CCDC71LQ8N9Z2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCDC71LQ8N9Z2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC71LQ8N9Z2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC71LQ8N9Z2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC71LQ8N9Z2 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC71LQ8N9Z2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC71LQ8N9Z2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCDC71LQ8N9Z2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms