Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00474Q9P2X8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00474Q9P2X8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC14□□□□□ -0.17
LINC00474Q9P2X8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00474Q9P2X8 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC14□□□□□ -0.17
LINC00474Q9P2X8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC14□□□□□ -0.17
LINC00474Q9P2X8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00474Q9P2X8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00474Q9P2X8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00474Q9P2X8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00474Q9P2X8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00474Q9P2X8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LINC00474Q9P2X8 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00474Q9P2X8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00474Q9P2X8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LINC00474Q9P2X8 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00474Q9P2X8 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00474Q9P2X8 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC13.99□□□□□ -0.17
LINC00474Q9P2X8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00474Q9P2X8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00474Q9P2X8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00474Q9P2X8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00474Q9P2X8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00474Q9P2X8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00474Q9P2X8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00474Q9P2X8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
LINC00474Q9P2X8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00474Q9P2X8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
LINC00474Q9P2X8 MPST-208ENST00000628507 698 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00474Q9P2X8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00474Q9P2X8 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LINC00474Q9P2X8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00474Q9P2X8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00474Q9P2X8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00474Q9P2X8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00474Q9P2X8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00474Q9P2X8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00474Q9P2X8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC00474Q9P2X8 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00474Q9P2X8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC00474Q9P2X8 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00474Q9P2X8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00474Q9P2X8 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LINC00474Q9P2X8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LINC00474Q9P2X8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC00474Q9P2X8 AC091305.1-201ENST00000479476 895 ntBASIC13.98□□□□□ -0.17
LINC00474Q9P2X8 AC126544.1-201ENST00000580842 1059 ntBASIC13.98□□□□□ -0.17
LINC00474Q9P2X8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00474Q9P2X8 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00474Q9P2X8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
LINC00474Q9P2X8 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00474Q9P2X8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00474Q9P2X8 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LINC00474Q9P2X8 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00474Q9P2X8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LINC00474Q9P2X8 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00474Q9P2X8 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00474Q9P2X8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00474Q9P2X8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00474Q9P2X8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC00474Q9P2X8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC00474Q9P2X8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00474Q9P2X8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00474Q9P2X8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00474Q9P2X8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00474Q9P2X8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
LINC00474Q9P2X8 GRAMD4P4-201ENST00000613563 1115 ntBASIC13.97□□□□□ -0.17
LINC00474Q9P2X8 AC110285.6-201ENST00000617652 491 ntBASIC13.97□□□□□ -0.17
LINC00474Q9P2X8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC13.97□□□□□ -0.17
LINC00474Q9P2X8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LINC00474Q9P2X8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC00474Q9P2X8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00474Q9P2X8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00474Q9P2X8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LINC00474Q9P2X8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00474Q9P2X8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LINC00474Q9P2X8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00474Q9P2X8 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00474Q9P2X8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LINC00474Q9P2X8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00474Q9P2X8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
LINC00474Q9P2X8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC00474Q9P2X8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00474Q9P2X8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00474Q9P2X8 AC010141.3-201ENST00000456659 717 ntBASIC13.96□□□□□ -0.17
LINC00474Q9P2X8 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LINC00474Q9P2X8 AL031602.1-201ENST00000633169 911 ntBASIC13.96□□□□□ -0.17
LINC00474Q9P2X8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00474Q9P2X8 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LINC00474Q9P2X8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC13.96□□□□□ -0.17
LINC00474Q9P2X8 RASA4CP-201ENST00000424092 1398 ntBASIC13.96□□□□□ -0.18
LINC00474Q9P2X8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC13.96□□□□□ -0.18
LINC00474Q9P2X8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00474Q9P2X8 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00474Q9P2X8 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00474Q9P2X8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00474Q9P2X8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
LINC00474Q9P2X8 SLC47A1P1-202ENST00000449666 945 ntBASIC13.95□□□□□ -0.18
LINC00474Q9P2X8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00474Q9P2X8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms