Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.32■■□□□ 1.32
LRRC53A6NM62 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.32■■□□□ 1.32
LRRC53A6NM62 AC079089.2-201ENST00000531211 1277 ntBASIC23.32■■□□□ 1.32
LRRC53A6NM62 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
LRRC53A6NM62 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
LRRC53A6NM62 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LRRC53A6NM62 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LRRC53A6NM62 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
LRRC53A6NM62 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LRRC53A6NM62 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LRRC53A6NM62 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.31■■□□□ 1.32
LRRC53A6NM62 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
LRRC53A6NM62 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LRRC53A6NM62 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.31■■□□□ 1.32
LRRC53A6NM62 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.31■■□□□ 1.32
LRRC53A6NM62 MIR3181-201ENST00000578512 73 ntBASIC23.31■■□□□ 1.32
LRRC53A6NM62 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
LRRC53A6NM62 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
LRRC53A6NM62 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
LRRC53A6NM62 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.31■■□□□ 1.32
LRRC53A6NM62 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LRRC53A6NM62 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
LRRC53A6NM62 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LRRC53A6NM62 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LRRC53A6NM62 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LRRC53A6NM62 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
LRRC53A6NM62 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LRRC53A6NM62 AC026471.6-201ENST00000622954 1905 ntBASIC23.3■■□□□ 1.32
LRRC53A6NM62 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
LRRC53A6NM62 AC005229.4-201ENST00000610085 2198 ntBASIC23.3■■□□□ 1.32
LRRC53A6NM62 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LRRC53A6NM62 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.29■■□□□ 1.32
LRRC53A6NM62 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LRRC53A6NM62 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
LRRC53A6NM62 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LRRC53A6NM62 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
LRRC53A6NM62 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
LRRC53A6NM62 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.29■■□□□ 1.32
LRRC53A6NM62 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.29■■□□□ 1.32
LRRC53A6NM62 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.29■■□□□ 1.32
LRRC53A6NM62 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
LRRC53A6NM62 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.29■■□□□ 1.32
LRRC53A6NM62 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LRRC53A6NM62 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.29■■□□□ 1.32
LRRC53A6NM62 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LRRC53A6NM62 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
LRRC53A6NM62 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.28■■□□□ 1.32
LRRC53A6NM62 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
LRRC53A6NM62 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LRRC53A6NM62 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LRRC53A6NM62 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
LRRC53A6NM62 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LRRC53A6NM62 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LRRC53A6NM62 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.27■■□□□ 1.32
LRRC53A6NM62 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
LRRC53A6NM62 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
LRRC53A6NM62 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
LRRC53A6NM62 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LRRC53A6NM62 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.27■■□□□ 1.32
LRRC53A6NM62 AL512631.2-201ENST00000604634 923 ntBASIC23.27■■□□□ 1.32
LRRC53A6NM62 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LRRC53A6NM62 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.27■■□□□ 1.32
LRRC53A6NM62 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LRRC53A6NM62 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.27■■□□□ 1.32
LRRC53A6NM62 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LRRC53A6NM62 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
LRRC53A6NM62 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LRRC53A6NM62 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
LRRC53A6NM62 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LRRC53A6NM62 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.26■■□□□ 1.31
LRRC53A6NM62 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.26■■□□□ 1.31
LRRC53A6NM62 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.26■■□□□ 1.31
LRRC53A6NM62 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
LRRC53A6NM62 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LRRC53A6NM62 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LRRC53A6NM62 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LRRC53A6NM62 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
LRRC53A6NM62 Z98882.1-201ENST00000622160 2253 ntBASIC23.25■■□□□ 1.31
LRRC53A6NM62 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LRRC53A6NM62 SRD5A1P1-201ENST00000442297 786 ntBASIC23.25■■□□□ 1.31
LRRC53A6NM62 OR2I1P-207ENST00000453522 948 ntBASIC23.25■■□□□ 1.31
LRRC53A6NM62 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LRRC53A6NM62 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.25■■□□□ 1.31
LRRC53A6NM62 OR7E47P-201ENST00000546390 1422 ntBASIC23.25■■□□□ 1.31
LRRC53A6NM62 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
LRRC53A6NM62 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.24■■□□□ 1.31
LRRC53A6NM62 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LRRC53A6NM62 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
LRRC53A6NM62 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
LRRC53A6NM62 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.24■■□□□ 1.31
LRRC53A6NM62 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
LRRC53A6NM62 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
LRRC53A6NM62 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.24■■□□□ 1.31
LRRC53A6NM62 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.24■■□□□ 1.31
LRRC53A6NM62 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
LRRC53A6NM62 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
LRRC53A6NM62 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.24■■□□□ 1.31
LRRC53A6NM62 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
LRRC53A6NM62 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.23■■□□□ 1.31
LRRC53A6NM62 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms