Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.56■■□□□ 1.84
CHD8Q9HCK8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.56■■□□□ 1.84
CHD8Q9HCK8 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CHD8Q9HCK8 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.55■■□□□ 1.84
CHD8Q9HCK8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.55■■□□□ 1.84
CHD8Q9HCK8 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
CHD8Q9HCK8 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
CHD8Q9HCK8 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
CHD8Q9HCK8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CHD8Q9HCK8 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
CHD8Q9HCK8 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CHD8Q9HCK8 CR559946.2-201ENST00000623684 991 ntBASIC26.51■■□□□ 1.83
CHD8Q9HCK8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CHD8Q9HCK8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.5■■□□□ 1.83
CHD8Q9HCK8 DUX4L29-201ENST00000425409 679 ntBASIC26.5■■□□□ 1.83
CHD8Q9HCK8 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CHD8Q9HCK8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CHD8Q9HCK8 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC26.47■■□□□ 1.83
CHD8Q9HCK8 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CHD8Q9HCK8 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.47■■□□□ 1.83
CHD8Q9HCK8 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHD8Q9HCK8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CHD8Q9HCK8 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHD8Q9HCK8 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CHD8Q9HCK8 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.44■■□□□ 1.82
CHD8Q9HCK8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.44■■□□□ 1.82
CHD8Q9HCK8 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
CHD8Q9HCK8 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC26.44■■□□□ 1.82
CHD8Q9HCK8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.44■■□□□ 1.82
CHD8Q9HCK8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CHD8Q9HCK8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CHD8Q9HCK8 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.41■■□□□ 1.82
CHD8Q9HCK8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHD8Q9HCK8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHD8Q9HCK8 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.39■■□□□ 1.82
CHD8Q9HCK8 RARRES2P2-201ENST00000394842 485 ntBASIC26.39■■□□□ 1.81
CHD8Q9HCK8 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHD8Q9HCK8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.38■■□□□ 1.81
CHD8Q9HCK8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.38■■□□□ 1.81
CHD8Q9HCK8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.37■■□□□ 1.81
CHD8Q9HCK8 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
CHD8Q9HCK8 AC021231.2-201ENST00000594613 730 ntBASIC26.36■■□□□ 1.81
CHD8Q9HCK8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
CHD8Q9HCK8 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.33■■□□□ 1.81
CHD8Q9HCK8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHD8Q9HCK8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CHD8Q9HCK8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CHD8Q9HCK8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CHD8Q9HCK8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
CHD8Q9HCK8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CHD8Q9HCK8 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.28■■□□□ 1.8
CHD8Q9HCK8 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHD8Q9HCK8 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
CHD8Q9HCK8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHD8Q9HCK8 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CHD8Q9HCK8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHD8Q9HCK8 ABHD17AP5-201ENST00000580133 923 ntBASIC26.27■■□□□ 1.8
CHD8Q9HCK8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CHD8Q9HCK8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHD8Q9HCK8 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CHD8Q9HCK8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.23■■□□□ 1.79
CHD8Q9HCK8 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHD8Q9HCK8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.22■■□□□ 1.79
CHD8Q9HCK8 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHD8Q9HCK8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.2■■□□□ 1.79
CHD8Q9HCK8 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.79
CHD8Q9HCK8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CHD8Q9HCK8 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.17■■□□□ 1.78
CHD8Q9HCK8 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
CHD8Q9HCK8 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
CHD8Q9HCK8 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC26.14■■□□□ 1.78
CHD8Q9HCK8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
CHD8Q9HCK8 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CHD8Q9HCK8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.13■■□□□ 1.77
CHD8Q9HCK8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.13■■□□□ 1.77
CHD8Q9HCK8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.11■■□□□ 1.77
CHD8Q9HCK8 DUX4L11-201ENST00000611504 1267 ntBASIC26.1■■□□□ 1.77
CHD8Q9HCK8 DUX4L12-201ENST00000614593 1267 ntBASIC26.1■■□□□ 1.77
CHD8Q9HCK8 LINC01971-201ENST00000617888 1048 ntBASIC26.1■■□□□ 1.77
CHD8Q9HCK8 DUX4L14-201ENST00000621227 1267 ntBASIC26.1■■□□□ 1.77
CHD8Q9HCK8 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.09■■□□□ 1.77
CHD8Q9HCK8 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.08■■□□□ 1.77
CHD8Q9HCK8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.07■■□□□ 1.76
CHD8Q9HCK8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.07■■□□□ 1.76
CHD8Q9HCK8 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
CHD8Q9HCK8 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CHD8Q9HCK8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CHD8Q9HCK8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.05■■□□□ 1.76
CHD8Q9HCK8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CHD8Q9HCK8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
CHD8Q9HCK8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
CHD8Q9HCK8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CHD8Q9HCK8 RNF126P1-201ENST00000567452 1320 ntBASIC26.02■■□□□ 1.76
CHD8Q9HCK8 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.02■■□□□ 1.76
CHD8Q9HCK8 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.01■■□□□ 1.75
CHD8Q9HCK8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26■■□□□ 1.75
CHD8Q9HCK8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
CHD8Q9HCK8 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC25.99■■□□□ 1.75
CHD8Q9HCK8 AC019069.1-201ENST00000610008 1333 ntBASIC25.98■■□□□ 1.75
CHD8Q9HCK8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.98■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms