Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CNTNAP3BQ96NU0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.6■■□□□ 1.85
CNTNAP3BQ96NU0 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
CNTNAP3BQ96NU0 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CNTNAP3BQ96NU0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.56■■□□□ 1.84
CNTNAP3BQ96NU0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.56■■□□□ 1.84
CNTNAP3BQ96NU0 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CNTNAP3BQ96NU0 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.56■■□□□ 1.84
CNTNAP3BQ96NU0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.55■■□□□ 1.84
CNTNAP3BQ96NU0 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CNTNAP3BQ96NU0 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
CNTNAP3BQ96NU0 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CNTNAP3BQ96NU0 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.53■■□□□ 1.84
CNTNAP3BQ96NU0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CNTNAP3BQ96NU0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
CNTNAP3BQ96NU0 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.52■■□□□ 1.84
CNTNAP3BQ96NU0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.52■■□□□ 1.84
CNTNAP3BQ96NU0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CNTNAP3BQ96NU0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.51■■□□□ 1.83
CNTNAP3BQ96NU0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.5■■□□□ 1.83
CNTNAP3BQ96NU0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CNTNAP3BQ96NU0 AC145285.7-201ENST00000614819 1539 ntBASIC26.49■■□□□ 1.83
CNTNAP3BQ96NU0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
CNTNAP3BQ96NU0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
CNTNAP3BQ96NU0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
CNTNAP3BQ96NU0 AC021231.2-201ENST00000594613 730 ntBASIC26.47■■□□□ 1.83
CNTNAP3BQ96NU0 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.46■■□□□ 1.83
CNTNAP3BQ96NU0 ABHD17AP5-201ENST00000580133 923 ntBASIC26.46■■□□□ 1.83
CNTNAP3BQ96NU0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.46■■□□□ 1.83
CNTNAP3BQ96NU0 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.45■■□□□ 1.82
CNTNAP3BQ96NU0 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.82
CNTNAP3BQ96NU0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CNTNAP3BQ96NU0 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC26.44■■□□□ 1.82
CNTNAP3BQ96NU0 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC26.43■■□□□ 1.82
CNTNAP3BQ96NU0 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CNTNAP3BQ96NU0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CNTNAP3BQ96NU0 CR559946.2-201ENST00000623684 991 ntBASIC26.42■■□□□ 1.82
CNTNAP3BQ96NU0 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CNTNAP3BQ96NU0 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CNTNAP3BQ96NU0 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC26.4■■□□□ 1.82
CNTNAP3BQ96NU0 RARRES2P2-201ENST00000394842 485 ntBASIC26.4■■□□□ 1.82
CNTNAP3BQ96NU0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
CNTNAP3BQ96NU0 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
CNTNAP3BQ96NU0 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CNTNAP3BQ96NU0 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
CNTNAP3BQ96NU0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.37■■□□□ 1.81
CNTNAP3BQ96NU0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CNTNAP3BQ96NU0 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CNTNAP3BQ96NU0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
CNTNAP3BQ96NU0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CNTNAP3BQ96NU0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CNTNAP3BQ96NU0 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.33■■□□□ 1.81
CNTNAP3BQ96NU0 DUX4L11-201ENST00000611504 1267 ntBASIC26.32■■□□□ 1.8
CNTNAP3BQ96NU0 DUX4L12-201ENST00000614593 1267 ntBASIC26.32■■□□□ 1.8
CNTNAP3BQ96NU0 DUX4L14-201ENST00000621227 1267 ntBASIC26.32■■□□□ 1.8
CNTNAP3BQ96NU0 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC26.32■■□□□ 1.8
CNTNAP3BQ96NU0 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.3■■□□□ 1.8
CNTNAP3BQ96NU0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.29■■□□□ 1.8
CNTNAP3BQ96NU0 AC019069.1-201ENST00000610008 1333 ntBASIC26.28■■□□□ 1.8
CNTNAP3BQ96NU0 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.28■■□□□ 1.8
CNTNAP3BQ96NU0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CNTNAP3BQ96NU0 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
CNTNAP3BQ96NU0 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
CNTNAP3BQ96NU0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CNTNAP3BQ96NU0 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CNTNAP3BQ96NU0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.24■■□□□ 1.79
CNTNAP3BQ96NU0 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CNTNAP3BQ96NU0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.23■■□□□ 1.79
CNTNAP3BQ96NU0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CNTNAP3BQ96NU0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.22■■□□□ 1.79
CNTNAP3BQ96NU0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
CNTNAP3BQ96NU0 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
CNTNAP3BQ96NU0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.21■■□□□ 1.79
CNTNAP3BQ96NU0 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.2■■□□□ 1.78
CNTNAP3BQ96NU0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.2■■□□□ 1.78
CNTNAP3BQ96NU0 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CNTNAP3BQ96NU0 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CNTNAP3BQ96NU0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CNTNAP3BQ96NU0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
CNTNAP3BQ96NU0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.17■■□□□ 1.78
CNTNAP3BQ96NU0 LINC01971-201ENST00000617888 1048 ntBASIC26.17■■□□□ 1.78
CNTNAP3BQ96NU0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CNTNAP3BQ96NU0 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
CNTNAP3BQ96NU0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.16■■□□□ 1.78
CNTNAP3BQ96NU0 AC012354.3-201ENST00000623734 483 ntBASIC26.16■■□□□ 1.78
CNTNAP3BQ96NU0 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CNTNAP3BQ96NU0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CNTNAP3BQ96NU0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC26.14■■□□□ 1.78
CNTNAP3BQ96NU0 AC018358.1-201ENST00000631079 1402 ntBASIC26.14■■□□□ 1.77
CNTNAP3BQ96NU0 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.13■■□□□ 1.77
CNTNAP3BQ96NU0 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC26.13■■□□□ 1.77
CNTNAP3BQ96NU0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.12■■□□□ 1.77
CNTNAP3BQ96NU0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CNTNAP3BQ96NU0 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.09■■□□□ 1.77
CNTNAP3BQ96NU0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CNTNAP3BQ96NU0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.08■■□□□ 1.77
CNTNAP3BQ96NU0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.08■■□□□ 1.77
CNTNAP3BQ96NU0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.08■■□□□ 1.77
CNTNAP3BQ96NU0 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CNTNAP3BQ96NU0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms