Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
C1QTNF9BB2RNN3 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.44■■□□□ 1.82
C1QTNF9BB2RNN3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
C1QTNF9BB2RNN3 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
C1QTNF9BB2RNN3 AC016575.1-201ENST00000607026 382 ntBASIC26.43■■□□□ 1.82
C1QTNF9BB2RNN3 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.4■■□□□ 1.82
C1QTNF9BB2RNN3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
C1QTNF9BB2RNN3 MIR3648-2-201ENST00000581792 180 ntBASIC26.38■■□□□ 1.81
C1QTNF9BB2RNN3 MIR3648-1-201ENST00000615959 180 ntBASIC26.38■■□□□ 1.81
C1QTNF9BB2RNN3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.37■■□□□ 1.81
C1QTNF9BB2RNN3 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.37■■□□□ 1.81
C1QTNF9BB2RNN3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.37■■□□□ 1.81
C1QTNF9BB2RNN3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.37■■□□□ 1.81
C1QTNF9BB2RNN3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
C1QTNF9BB2RNN3 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
C1QTNF9BB2RNN3 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
C1QTNF9BB2RNN3 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
C1QTNF9BB2RNN3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
C1QTNF9BB2RNN3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC26.33■■□□□ 1.81
C1QTNF9BB2RNN3 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.32■■□□□ 1.8
C1QTNF9BB2RNN3 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
C1QTNF9BB2RNN3 AC021231.2-201ENST00000594613 730 ntBASIC26.31■■□□□ 1.8
C1QTNF9BB2RNN3 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC26.31■■□□□ 1.8
C1QTNF9BB2RNN3 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.29■■□□□ 1.8
C1QTNF9BB2RNN3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.28■■□□□ 1.8
C1QTNF9BB2RNN3 ILK-212ENST00000532063 1617 ntTSL 2 BASIC26.28■■□□□ 1.8
C1QTNF9BB2RNN3 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
C1QTNF9BB2RNN3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.27■■□□□ 1.8
C1QTNF9BB2RNN3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
C1QTNF9BB2RNN3 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.26■■□□□ 1.79
C1QTNF9BB2RNN3 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
C1QTNF9BB2RNN3 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
C1QTNF9BB2RNN3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.23■■□□□ 1.79
C1QTNF9BB2RNN3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.23■■□□□ 1.79
C1QTNF9BB2RNN3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
C1QTNF9BB2RNN3 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
C1QTNF9BB2RNN3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
C1QTNF9BB2RNN3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.18■■□□□ 1.78
C1QTNF9BB2RNN3 CR559946.2-201ENST00000623684 991 ntBASIC26.18■■□□□ 1.78
C1QTNF9BB2RNN3 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
C1QTNF9BB2RNN3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
C1QTNF9BB2RNN3 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.17■■□□□ 1.78
C1QTNF9BB2RNN3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
C1QTNF9BB2RNN3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
C1QTNF9BB2RNN3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
C1QTNF9BB2RNN3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
C1QTNF9BB2RNN3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
C1QTNF9BB2RNN3 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.14■■□□□ 1.78
C1QTNF9BB2RNN3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
C1QTNF9BB2RNN3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.13■■□□□ 1.77
C1QTNF9BB2RNN3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.13■■□□□ 1.77
C1QTNF9BB2RNN3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
C1QTNF9BB2RNN3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.11■■□□□ 1.77
C1QTNF9BB2RNN3 DUX4L11-201ENST00000611504 1267 ntBASIC26.11■■□□□ 1.77
C1QTNF9BB2RNN3 DUX4L12-201ENST00000614593 1267 ntBASIC26.11■■□□□ 1.77
C1QTNF9BB2RNN3 DUX4L14-201ENST00000621227 1267 ntBASIC26.11■■□□□ 1.77
C1QTNF9BB2RNN3 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
C1QTNF9BB2RNN3 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.1■■□□□ 1.77
C1QTNF9BB2RNN3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
C1QTNF9BB2RNN3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
C1QTNF9BB2RNN3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
C1QTNF9BB2RNN3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
C1QTNF9BB2RNN3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
C1QTNF9BB2RNN3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.06■■□□□ 1.76
C1QTNF9BB2RNN3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
C1QTNF9BB2RNN3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
C1QTNF9BB2RNN3 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
C1QTNF9BB2RNN3 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
C1QTNF9BB2RNN3 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
C1QTNF9BB2RNN3 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
C1QTNF9BB2RNN3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.04■■□□□ 1.76
C1QTNF9BB2RNN3 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.03■■□□□ 1.76
C1QTNF9BB2RNN3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.02■■□□□ 1.76
C1QTNF9BB2RNN3 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.01■■□□□ 1.75
C1QTNF9BB2RNN3 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26■■□□□ 1.75
C1QTNF9BB2RNN3 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
C1QTNF9BB2RNN3 LINC01971-201ENST00000617888 1048 ntBASIC26■■□□□ 1.75
C1QTNF9BB2RNN3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.99■■□□□ 1.75
C1QTNF9BB2RNN3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.98■■□□□ 1.75
C1QTNF9BB2RNN3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.98■■□□□ 1.75
C1QTNF9BB2RNN3 ABHD17AP5-201ENST00000580133 923 ntBASIC25.98■■□□□ 1.75
C1QTNF9BB2RNN3 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC25.98■■□□□ 1.75
C1QTNF9BB2RNN3 RARRES2P2-201ENST00000394842 485 ntBASIC25.97■■□□□ 1.75
C1QTNF9BB2RNN3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.97■■□□□ 1.75
C1QTNF9BB2RNN3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
C1QTNF9BB2RNN3 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
C1QTNF9BB2RNN3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
C1QTNF9BB2RNN3 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC25.92■■□□□ 1.74
C1QTNF9BB2RNN3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.92■■□□□ 1.74
C1QTNF9BB2RNN3 WASH5P-204ENST00000632292 975 ntBASIC25.92■■□□□ 1.74
C1QTNF9BB2RNN3 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
C1QTNF9BB2RNN3 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
C1QTNF9BB2RNN3 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
C1QTNF9BB2RNN3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.91■■□□□ 1.74
C1QTNF9BB2RNN3 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
C1QTNF9BB2RNN3 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
C1QTNF9BB2RNN3 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
C1QTNF9BB2RNN3 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
C1QTNF9BB2RNN3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.89■■□□□ 1.74
C1QTNF9BB2RNN3 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms