Protein–RNA interactions for Protein: A0A0K0K1B3

TRBV30, T-cell receptor beta variable 30 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV30A0A0K0K1B3 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV30A0A0K0K1B3 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
TRBV30A0A0K0K1B3 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV30A0A0K0K1B3 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV30A0A0K0K1B3 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV30A0A0K0K1B3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.28■□□□□ 0.52
TRBV30A0A0K0K1B3 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV30A0A0K0K1B3 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV30A0A0K0K1B3 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV30A0A0K0K1B3 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TRBV30A0A0K0K1B3 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRBV30A0A0K0K1B3 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC18.26■□□□□ 0.51
TRBV30A0A0K0K1B3 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV30A0A0K0K1B3 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRBV30A0A0K0K1B3 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV30A0A0K0K1B3 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRBV30A0A0K0K1B3 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC18.25■□□□□ 0.51
TRBV30A0A0K0K1B3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
TRBV30A0A0K0K1B3 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV30A0A0K0K1B3 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
TRBV30A0A0K0K1B3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC18.24■□□□□ 0.51
TRBV30A0A0K0K1B3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRBV30A0A0K0K1B3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV30A0A0K0K1B3 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV30A0A0K0K1B3 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC18.22■□□□□ 0.51
TRBV30A0A0K0K1B3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV30A0A0K0K1B3 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV30A0A0K0K1B3 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV30A0A0K0K1B3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV30A0A0K0K1B3 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV30A0A0K0K1B3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV30A0A0K0K1B3 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC18.2■□□□□ 0.5
TRBV30A0A0K0K1B3 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
TRBV30A0A0K0K1B3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV30A0A0K0K1B3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.18■□□□□ 0.5
TRBV30A0A0K0K1B3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV30A0A0K0K1B3 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC18.18■□□□□ 0.5
TRBV30A0A0K0K1B3 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV30A0A0K0K1B3 AC135731.1-201ENST00000569415 2548 ntBASIC18.18■□□□□ 0.5
TRBV30A0A0K0K1B3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.18■□□□□ 0.5
TRBV30A0A0K0K1B3 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV30A0A0K0K1B3 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC18.18■□□□□ 0.5
TRBV30A0A0K0K1B3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRBV30A0A0K0K1B3 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV30A0A0K0K1B3 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV30A0A0K0K1B3 MVK-208ENST00000539696 608 ntTSL 5 BASIC18.16■□□□□ 0.5
TRBV30A0A0K0K1B3 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV30A0A0K0K1B3 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV30A0A0K0K1B3 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TRBV30A0A0K0K1B3 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRBV30A0A0K0K1B3 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV30A0A0K0K1B3 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC18.14■□□□□ 0.49
TRBV30A0A0K0K1B3 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV30A0A0K0K1B3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.13■□□□□ 0.49
TRBV30A0A0K0K1B3 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV30A0A0K0K1B3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
TRBV30A0A0K0K1B3 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC18.13■□□□□ 0.49
TRBV30A0A0K0K1B3 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV30A0A0K0K1B3 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
TRBV30A0A0K0K1B3 ZNRF2P1-201ENST00000441407 443 ntBASIC18.12■□□□□ 0.49
TRBV30A0A0K0K1B3 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV30A0A0K0K1B3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV30A0A0K0K1B3 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV30A0A0K0K1B3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV30A0A0K0K1B3 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC18.11■□□□□ 0.49
TRBV30A0A0K0K1B3 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV30A0A0K0K1B3 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TRBV30A0A0K0K1B3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV30A0A0K0K1B3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV30A0A0K0K1B3 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV30A0A0K0K1B3 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC18.09■□□□□ 0.49
TRBV30A0A0K0K1B3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV30A0A0K0K1B3 AC120057.4-201ENST00000624722 1615 ntBASIC18.09■□□□□ 0.49
TRBV30A0A0K0K1B3 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
TRBV30A0A0K0K1B3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
TRBV30A0A0K0K1B3 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC18.08■□□□□ 0.48
TRBV30A0A0K0K1B3 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV30A0A0K0K1B3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TRBV30A0A0K0K1B3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
TRBV30A0A0K0K1B3 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV30A0A0K0K1B3 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV30A0A0K0K1B3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV30A0A0K0K1B3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV30A0A0K0K1B3 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV30A0A0K0K1B3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV30A0A0K0K1B3 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV30A0A0K0K1B3 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV30A0A0K0K1B3 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC18.05■□□□□ 0.48
TRBV30A0A0K0K1B3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV30A0A0K0K1B3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV30A0A0K0K1B3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.03■□□□□ 0.48
TRBV30A0A0K0K1B3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC18.03■□□□□ 0.48
TRBV30A0A0K0K1B3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV30A0A0K0K1B3 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18.03■□□□□ 0.48
TRBV30A0A0K0K1B3 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV30A0A0K0K1B3 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV30A0A0K0K1B3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.02■□□□□ 0.47
TRBV30A0A0K0K1B3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV30A0A0K0K1B3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.01■□□□□ 0.47
TRBV30A0A0K0K1B3 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms